FFCP PHASE1:Hg19::chr2:9695712..9695737,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6868 | |EntrezGene=6868 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=195 | |HGNC=195 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=165bp_to_ENST00000478059_5end | |association_with_transcript=165bp_to_ENST00000478059_5end | ||
|cluster_id=chr2:9695712..9695737,- | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_6_at_ADAM17_5end | |description=CAGE_peak_6_at_ADAM17_5end | ||
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|ontology_enrichment_celltype=CL:0002057!3.81e-28!42;CL:0000860!6.56e-26!45;CL:0000766!8.03e-22!76;CL:0002009!5.08e-20!65;CL:0000557!7.16e-20!71;CL:0002194!1.07e-18!63;CL:0000576!1.07e-18!63;CL:0000040!1.07e-18!63;CL:0000559!1.07e-18!63;CL:0000839!5.65e-18!70;CL:0000763!8.06e-13!112;CL:0000049!8.06e-13!112;CL:0000738!1.27e-12!140;CL:0002087!3.88e-09!119;CL:0002031!1.24e-08!124;CL:0000037!2.02e-08!172;CL:0000566!2.02e-08!172;CL:0000988!1.01e-07!182;CL:0002032!6.05e-07!165;CL:0000837!6.05e-07!165 | |ontology_enrichment_celltype=CL:0002057!3.81e-28!42;CL:0000860!6.56e-26!45;CL:0000766!8.03e-22!76;CL:0002009!5.08e-20!65;CL:0000557!7.16e-20!71;CL:0002194!1.07e-18!63;CL:0000576!1.07e-18!63;CL:0000040!1.07e-18!63;CL:0000559!1.07e-18!63;CL:0000839!5.65e-18!70;CL:0000763!8.06e-13!112;CL:0000049!8.06e-13!112;CL:0000738!1.27e-12!140;CL:0002087!3.88e-09!119;CL:0002031!1.24e-08!124;CL:0000037!2.02e-08!172;CL:0000566!2.02e-08!172;CL:0000988!1.01e-07!182;CL:0002032!6.05e-07!165;CL:0000837!6.05e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.16e-64;33!CL:0002057;1.16e-64;33!CL:0000473;1.15e-49;39!CL:0000234;1.15e-49;39!CL:0000576;3.97e-38;48!CL:0000766;1.03e-35;69!CL:0000094;1.85e-15;8!CL:0000081;6.93e-15;11!CL:0000763;1.89e-12;100!CL:0000767;4.10e-11;3!CL:0002087;1.24e-10;104!CL:0000738;2.88e-09;136!CL:0001014;2.74e-08;2!CL:0001016;2.74e-08;2 | |ontology_enrichment_celltype_v019=CL:0000860;1.16e-64;33!CL:0002057;1.16e-64;33!CL:0000473;1.15e-49;39!CL:0000234;1.15e-49;39!CL:0000576;3.97e-38;48!CL:0000766;1.03e-35;69!CL:0000094;1.85e-15;8!CL:0000081;6.93e-15;11!CL:0000763;1.89e-12;100!CL:0000767;4.10e-11;3!CL:0002087;1.24e-10;104!CL:0000738;2.88e-09;136!CL:0001014;2.74e-08;2!CL:0001016;2.74e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.01e-73,42;CL:0002057,1.01e-73,42;CL:0000473,6.44e-68,48;CL:0000234,6.44e-68,48;CL:0000766,2.10e-65,72;CL:0002009,4.34e-58,61;CL:0000557,6.32e-56,67;CL:0002194,1.01e-52,59;CL:0000576,1.01e-52,59;CL:0000040,1.01e-52,59;CL:0000559,1.01e-52,59;CL:0000839,6.85e-50,66;CL:0000763,9.09e-46,108;CL:0000049,9.09e-46,108;CL:0000738,1.28e-40,136;CL:0000037,5.06e-31,168;CL:0000988,1.36e-30,177;CL:0002031,1.17e-27,120;CL:0002032,1.22e-27,161;CL:0000837,1.22e-27,161;CL:0002087,5.04e-27,115;CL:0000094,8.14e-16,8;CL:0000081,3.65e-15,11;CL:0000134,7.81e-12,354;CL:0000767,1.88e-11,3;CL:0002320,2.10e-11,361;CL:0000219,6.77e-10,386;CL:0000034,9.23e-09,441;CL:0001014,2.34e-08,2;CL:0001016,2.34e-08,2;CL:0000048,4.66e-08,427;CL:0000723,8.33e-08,433;CL:0002393,6.86e-07,9;CL:0002397,6.86e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.92e-54;42!CL:0000049;6.18e-12;108 | |ontology_enrichment_development_v019=CL:0002057;2.92e-54;42!CL:0000049;6.18e-12;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.08e-18!80;UBERON:0002390!3.57e-17!102;UBERON:0003061!3.57e-17!102;UBERON:0001474!1.17e-16!86;UBERON:0002193!1.07e-15!112;UBERON:0004765!6.37e-13!101;UBERON:0001434!6.37e-13!101;UBERON:0002405!4.21e-12!115;UBERON:0003081!5.19e-07!216;UBERON:0002204!9.58e-07!167 | |ontology_enrichment_uberon=UBERON:0002371!3.08e-18!80;UBERON:0002390!3.57e-17!102;UBERON:0003061!3.57e-17!102;UBERON:0001474!1.17e-16!86;UBERON:0002193!1.07e-15!112;UBERON:0004765!6.37e-13!101;UBERON:0001434!6.37e-13!101;UBERON:0002405!4.21e-12!115;UBERON:0003081!5.19e-07!216;UBERON:0002204!9.58e-07!167 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.23e-48,76;UBERON:0002390,1.62e-45,98;UBERON:0003061,1.62e-45,98;UBERON:0001474,2.96e-44,82;UBERON:0002193,1.74e-40,108;UBERON:0004765,1.32e-39,90;UBERON:0002405,4.56e-38,93;UBERON:0001434,7.84e-35,100;UBERON:0003081,9.31e-20,203;UBERON:0002204,1.48e-17,167;UBERON:0000926,5.38e-11,315;UBERON:0004120,5.38e-11,315;UBERON:0006603,5.38e-11,315;UBERON:0002384,8.06e-11,371 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.422863212287913,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0,0,0.273748850145768,0.251085279189606,0.0764134057479513,0.0821005894499457,0.0787107813136792,1.57345710739562,1.15148819429164,1.70297735647684,0,0,0.369754010166788,0,0.284338464974843,0.293600439334847,2.21598163412751,5.61524452916397,5.20826089718044,0,0,0,0.436194716338694,1.51150377475524,1.21292030593908,0.697287110717054,3.70051099219643,1.54853185447552,2.58923153089935,3.07392847834921,3.78371567821736,6.20542225325913,5.80936215225443,4.06279459783025,1.12945403725563,1.09162460023138,1.34834090667051,4.89734227793444,3.85114832491312,5.75403413219137,1.64925650093358,1.19678194572979,2.98357325372886,3.19230162491442,2.26954089876456,2.4912889959823,0.251248665256743,2.08593167368081,1.52032191293582,0.605399502633369,4.41933163185078,5.37986058649504,0,0.212604299965044,0.628975936525128,0.336985893439485,0.901061357049038,0.964353520182481,1.14005097496499,0.39783335439818,0.365328307529268,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0.382273228125229,1.32171328579026,1.12101712596307,0,0.196709770113833,0,0.411202997999018,0,0,0.473447805734733,0,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0.434473211648397,0,0,0.12786256184353,0,0,0,0.795285947051099,0,0.0945348171640679,0.443458794925128,0.263504357079378,0.130979075497713,0,0,0.649094787309367,0.174129737299267,0,0.715471872916026,1.14398982156026,0.371457501329565,0.198762407366705,0,0,0,0.419499436209906,0,0.417989933073621,0,0.35576626268671,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,1.31780417436063,0,0,0.496971951695318,0.25326102332916,0.397227542439656,0.573673241497627,0.354668382198357,0,0,0,0.311211035399766,0.538842688278752,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.538168907066586,0,0.211931901159562,0.300091096084402,0.206105058476878,0,0,0.168776332241266,0.0974370051611986,0.504867548488229,0.184099797284599,0.161646056818812,0.355009592516614,0.10075209822764,0,0.193260853163297,0.545492241181669,1.14721838155602,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0.433099343283221,0,0,0,0,0,1.17002132569619,0,0,0.16798212819886,0,0.0895585227028483,0,0,135.97505365928,0.088048434013226,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0.266422179016099,0.142977993658148,0,0.823240336780769,0.325736184293735,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0.537182889719687,0,0.394061520403854,0,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,1.49801404789436,0,2.48649308061621,0,0,0.271265023699736,0,0.178428988797162,0.157702415033935,0,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0.0868836144680828,0,0,1.03384013061444,1.94142780736755,0.960548020230999,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.640695746278505,0,0.160853921143607,0,0.308419387605311,0,0,0,0.116210378459959,0.120859449591622,0.40101294060657,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0,0,0,0,0.096670718292122,0,0.15350367472613,0.413509717453592,0.322260734604821,0,0.340906509664404,0.356128142586949,0,0.192190067365106,0,0.30347334256665,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0.855877976067841,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0.422215270595328,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08006287447623,0.79312517629427,0.106824071127473,0,0.245040215981032,0.371606350251437,0.144269212976445,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0.19538809540204,0.278406173895242,0,0.270455678475983,0,0,0,0.586032717087576,0,0.111443384277478,0.284136146806413,0.47748896947538,0,0.307160702099232,0,0,0,0.16480387422676,0,0.796991953004279,0,0,0.102268682502155,0,0.311039587661807,0,0.358042349351218,0.511572370226872,0,0,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0.23056390438806,0,0.325942115766024,0,0.0915975934018623,0,0,0,0.332423363800313,0,0,0.167821586975843,0,0,0.421996129056054,0,0,0,0,0,0,1.18608451472249,0.494255755786011,0.104421949505455,0,0,0,0,0,0.728341138602278,0,0,0,1.95878396848313,0.450970258243478,0.103688191397247,0,0,0.313932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| ||
|short_description=p6@ADAM17 | |short_description=p6@ADAM17 | ||
}} | }} |
Latest revision as of 00:50, 19 September 2015
Short description: | p6@ADAM17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ADAM17_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 165bp_to_ENST00000478059_5end |
EntrezGene: | ADAM17 |
HGNC: | 195 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.23e-48 | 76 |
hematopoietic system | 1.62e-45 | 98 |
blood island | 1.62e-45 | 98 |
bone element | 2.96e-44 | 82 |
hemolymphoid system | 1.74e-40 | 108 |
skeletal element | 1.32e-39 | 90 |
immune system | 4.56e-38 | 93 |
skeletal system | 7.84e-35 | 100 |
lateral plate mesoderm | 9.31e-20 | 203 |
musculoskeletal system | 1.48e-17 | 167 |
mesoderm | 5.38e-11 | 315 |
mesoderm-derived structure | 5.38e-11 | 315 |
presumptive mesoderm | 5.38e-11 | 315 |
connective tissue | 8.06e-11 | 371 |