FFCP PHASE1:Hg19::chr1:161046266..161046273,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81607 | |EntrezGene=81607 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19688 | |HGNC=19688 | ||
|TSSclassifier=strong | |||
|UniProt=B4DQW3 | |UniProt=B4DQW3 | ||
|association_with_transcript=0bp_to_ENST00000453926,uc010pjz.1_5end | |association_with_transcript=0bp_to_ENST00000453926,uc010pjz.1_5end | ||
|cluster_id=chr1:161046266..161046273,- | |||
|coexpression_cluster_id=C45 | |coexpression_cluster_id=C45 | ||
|description=CAGE_peak_12_at_PVRL4_5end | |description=CAGE_peak_12_at_PVRL4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!7.25e-16!7;CL:0000586!7.25e-16!7;CL:0000313!7.59e-08!1;CL:0002336!1.06e-07!1;CL:0002261!1.06e-07!1;CL:0002170!1.06e-07!1;CL:0000066!1.81e-07!254 | |ontology_enrichment_celltype=CL:0000039!7.25e-16!7;CL:0000586!7.25e-16!7;CL:0000313!7.59e-08!1;CL:0002336!1.06e-07!1;CL:0002261!1.06e-07!1;CL:0002170!1.06e-07!1;CL:0000066!1.81e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0001014;5.96e-34;2!CL:0001016;5.96e-34;2!CL:0002577;3.66e-23;3!CL:0000453;1.71e-14;5!CL:0000840;2.59e-12;5!CL:0000039;8.16e-11;7!CL:0000586;8.16e-11;7!CL:0000990;1.16e-08;8!CL:0000451;2.55e-07;10 | |ontology_enrichment_celltype_v019=CL:0001014;5.96e-34;2!CL:0001016;5.96e-34;2!CL:0002577;3.66e-23;3!CL:0000453;1.71e-14;5!CL:0000840;2.59e-12;5!CL:0000039;8.16e-11;7!CL:0000586;8.16e-11;7!CL:0000990;1.16e-08;8!CL:0000451;2.55e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.04e-34,2;CL:0001016,5.04e-34,2;CL:0002577,4.09e-23,3;CL:0000453,1.60e-14,5;CL:0000840,2.45e-12,5;CL:0001029,2.45e-12,5;CL:0000039,8.16e-11,7;CL:0000586,8.16e-11,7;CL:0000990,1.12e-08,8;CL:0000451,2.47e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.73e-08;10!UBERON:0005564;5.73e-08;10 | |ontology_enrichment_development_v019=UBERON:0009117;5.73e-08;10!UBERON:0005564;5.73e-08;10 | ||
|ontology_enrichment_disease=DOID:305!3.12e-08!106;DOID:6193!5.40e-08!1;DOID:2152!7.59e-08!1 | |ontology_enrichment_disease=DOID:305!3.12e-08!106;DOID:6193!5.40e-08!1;DOID:2152!7.59e-08!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!6.62e-14!8;UBERON:0004176!1.73e-10!22;UBERON:0003135!3.76e-10!11;UBERON:0005631!4.22e-08!14;UBERON:0000158!4.22e-08!14;UBERON:0002372!5.79e-08!1;UBERON:0001961!5.79e-08!1;UBERON:0001744!5.79e-08!1;UBERON:0001735!5.79e-08!1;UBERON:0000991!6.86e-08!21;UBERON:0009196!6.86e-08!21;UBERON:0009117!6.86e-08!21;UBERON:0005564!6.86e-08!21;UBERON:0004911!7.59e-08!1;UBERON:0000997!9.29e-08!1;UBERON:0005056!9.29e-08!1;UBERON:0003101!1.75e-07!22;UBERON:0000079!1.75e-07!22 | |ontology_enrichment_uberon=UBERON:0000473!6.62e-14!8;UBERON:0004176!1.73e-10!22;UBERON:0003135!3.76e-10!11;UBERON:0005631!4.22e-08!14;UBERON:0000158!4.22e-08!14;UBERON:0002372!5.79e-08!1;UBERON:0001961!5.79e-08!1;UBERON:0001744!5.79e-08!1;UBERON:0001735!5.79e-08!1;UBERON:0000991!6.86e-08!21;UBERON:0009196!6.86e-08!21;UBERON:0009117!6.86e-08!21;UBERON:0005564!6.86e-08!21;UBERON:0004911!7.59e-08!1;UBERON:0000997!9.29e-08!1;UBERON:0005056!9.29e-08!1;UBERON:0003101!1.75e-07!22;UBERON:0000079!1.75e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;9.45e-18;4!UBERON:0000473;1.24e-09;8!UBERON:0003135;2.32e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0001987;9.45e-18;4!UBERON:0000473;1.24e-09;8!UBERON:0003135;2.32e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.03e-17,4;UBERON:0004340,1.03e-17,4;UBERON:0003124,9.89e-11,7;UBERON:0000473,1.24e-09,8;UBERON:0003135,2.32e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21251028578504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.921482106297696,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0.38582807654183,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.534434810531121,3.21632148371957,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21251028578504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.921482106297696,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0.38582807654183,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.534434810531121,3.21632148371957,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p12@PVRL4 | |short_description=p12@PVRL4 | ||
}} | }} |
Latest revision as of 04:35, 18 September 2015
Short description: | p12@PVRL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PVRL4_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | 0bp_to_ENST00000453926, uc010pjz.1_5end |
EntrezGene: | PVRL4 |
HGNC: | 19688 |
UniProt: | B4DQW3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.04e-34 | 2 |
immature CD1a-positive Langerhans cell | 5.04e-34 | 2 |
placental epithelial cell | 4.09e-23 | 3 |
Langerhans cell | 1.60e-14 | 5 |
immature conventional dendritic cell | 2.45e-12 | 5 |
common dendritic progenitor | 2.45e-12 | 5 |
germ line cell | 8.16e-11 | 7 |
germ cell | 8.16e-11 | 7 |
conventional dendritic cell | 1.12e-08 | 8 |
dendritic cell | 2.47e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
placenta | 1.03e-17 | 4 |
allantois | 1.03e-17 | 4 |
chorion | 9.89e-11 | 7 |
testis | 1.24e-09 | 8 |
male reproductive organ | 2.32e-07 | 11 |