FFCP PHASE1:Hg19::chr16:68867835..68867849,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:68867835..68867849,+ | |||
|coexpression_cluster_id=C2385 | |coexpression_cluster_id=C2385 | ||
|description=CAGE_peak_at_chr16:68867835..68867849,+ | |description=CAGE_peak_at_chr16:68867835..68867849,+ | ||
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|ontology_enrichment_celltype=CL:0000066!1.48e-18!254;CL:0000223!2.80e-16!59;CL:0002076!1.70e-13!43;CL:0000039!8.67e-12!7;CL:0000586!8.67e-12!7 | |ontology_enrichment_celltype=CL:0000066!1.48e-18!254;CL:0000223!2.80e-16!59;CL:0002076!1.70e-13!43;CL:0000039!8.67e-12!7;CL:0000586!8.67e-12!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;8.84e-14;7!CL:0000586;8.84e-14;7!CL:0000082;1.53e-07;19!CL:0000083;6.30e-07;4 | |ontology_enrichment_celltype_v019=CL:0000039;8.84e-14;7!CL:0000586;8.84e-14;7!CL:0000082;1.53e-07;19!CL:0000083;6.30e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,8.14e-14,7;CL:0000586,8.14e-14,7;CL:0000066,1.13e-11,253;CL:0000223,2.78e-10,58;CL:0000082,1.51e-07,19;CL:0000083,5.36e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.15e-08;30 | |ontology_enrichment_development_v019=UBERON:0001041;1.15e-08;30 | ||
|ontology_enrichment_disease=DOID:305!4.40e-23!106;DOID:0050687!3.03e-19!143;DOID:1749!1.78e-15!14;DOID:162!1.03e-09!235;DOID:14566!3.37e-09!239;DOID:299!4.87e-07!25 | |ontology_enrichment_disease=DOID:305!4.40e-23!106;DOID:0050687!3.03e-19!143;DOID:1749!1.78e-15!14;DOID:162!1.03e-09!235;DOID:14566!3.37e-09!239;DOID:299!4.87e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:1749;8.11e-15;14!DOID:0050615;9.78e-13;16!DOID:170;1.17e-09;6!DOID:1324;1.29e-09;15!DOID:305;4.35e-08;106!DOID:1799;1.16e-07;1!DOID:10165;1.16e-07;1!DOID:1798;1.16e-07;1!DOID:0050619;2.59e-07;1!DOID:3111;2.59e-07;1!DOID:1357;2.59e-07;1!DOID:3603;2.59e-07;1!DOID:1793;6.30e-07;4 | |ontology_enrichment_disease_v019=DOID:1749;8.11e-15;14!DOID:0050615;9.78e-13;16!DOID:170;1.17e-09;6!DOID:1324;1.29e-09;15!DOID:305;4.35e-08;106!DOID:1799;1.16e-07;1!DOID:10165;1.16e-07;1!DOID:1798;1.16e-07;1!DOID:0050619;2.59e-07;1!DOID:3111;2.59e-07;1!DOID:1357;2.59e-07;1!DOID:3603;2.59e-07;1!DOID:1793;6.30e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:305,2.95e-27,106;DOID:0050687,6.86e-23,143;DOID:162,1.17e-15,235;DOID:14566,3.25e-15,239;DOID:1749,1.06e-14,14;DOID:0050615,9.09e-13,16;DOID:170,1.02e-09,6;DOID:1324,1.27e-09,15;DOID:0050686,1.05e-07,137;DOID:1799,1.12e-07,1;DOID:10165,1.12e-07,1;DOID:1798,1.12e-07,1;DOID:0050619,2.23e-07,1;DOID:1357,2.23e-07,1;DOID:3111,3.02e-07,1;DOID:3603,3.02e-07,1;DOID:1793,5.36e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.62e-15!169;UBERON:0000925!1.62e-15!169;UBERON:0006595!1.62e-15!169;UBERON:0001007!5.76e-14!155;UBERON:0001555!5.76e-14!155;UBERON:0007026!5.76e-14!155;UBERON:0004921!1.61e-11!129;UBERON:0004185!1.61e-11!129;UBERON:0000466!2.22e-11!126;UBERON:0000077!7.87e-11!130;UBERON:0000464!6.40e-10!104;UBERON:0005911!1.42e-08!82;UBERON:0005177!9.65e-08!107;UBERON:0001004!3.29e-07!72;UBERON:0001041!3.99e-07!98;UBERON:0002553!9.08e-07!70 | |ontology_enrichment_uberon=UBERON:0004119!1.62e-15!169;UBERON:0000925!1.62e-15!169;UBERON:0006595!1.62e-15!169;UBERON:0001007!5.76e-14!155;UBERON:0001555!5.76e-14!155;UBERON:0007026!5.76e-14!155;UBERON:0004921!1.61e-11!129;UBERON:0004185!1.61e-11!129;UBERON:0000466!2.22e-11!126;UBERON:0000077!7.87e-11!130;UBERON:0000464!6.40e-10!104;UBERON:0005911!1.42e-08!82;UBERON:0005177!9.65e-08!107;UBERON:0001004!3.29e-07!72;UBERON:0001041!3.99e-07!98;UBERON:0002553!9.08e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0004802;1.53e-07;19!UBERON:0000115;1.53e-07;19!UBERON:0000997;1.97e-07;1!UBERON:0005056;1.97e-07;1!UBERON:0004176;1.97e-07;1!UBERON:0001764;2.59e-07;1!UBERON:0001825;2.59e-07;1!UBERON:0001052;6.99e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0004802;1.53e-07;19!UBERON:0000115;1.53e-07;19!UBERON:0000997;1.97e-07;1!UBERON:0005056;1.97e-07;1!UBERON:0004176;1.97e-07;1!UBERON:0001764;2.59e-07;1!UBERON:0001825;2.59e-07;1!UBERON:0001052;6.99e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,1.51e-07,19;UBERON:0000115,1.51e-07,19;UBERON:0000997,1.85e-07,1;UBERON:0005056,1.85e-07,1;UBERON:0001764,2.23e-07,1;UBERON:0001825,2.23e-07,1;UBERON:0001052,7.87e-07,4 | |||
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|short_description=p@chr16:68867835..68867849,+ | |short_description=p@chr16:68867835..68867849,+ | ||
}} | }} |
Latest revision as of 11:47, 25 July 2015
Short description: | p@chr16:68867835..68867849, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:68867835..68867849, + |
Coexpression cluster: | C2385_breast_choriocarcinoma_squamous_pancreatic_malignant_mesothelioma_bronchioalveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 8.14e-14 | 7 |
germ cell | 8.14e-14 | 7 |
epithelial cell | 1.13e-11 | 253 |
endodermal cell | 2.78e-10 | 58 |
epithelial cell of lung | 1.51e-07 | 19 |
epithelial cell of pancreas | 5.36e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 1.51e-07 | 19 |
lung epithelium | 1.51e-07 | 19 |
mammalian vulva | 1.85e-07 | 1 |
external female genitalia | 1.85e-07 | 1 |
maxillary sinus | 2.23e-07 | 1 |
paranasal sinus | 2.23e-07 | 1 |
rectum | 7.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.95e-27 | 106 |
cell type cancer | 6.86e-23 | 143 |
cancer | 1.17e-15 | 235 |
disease of cellular proliferation | 3.25e-15 | 239 |
squamous cell carcinoma | 1.06e-14 | 14 |
respiratory system cancer | 9.09e-13 | 16 |
endocrine gland cancer | 1.02e-09 | 6 |
lung cancer | 1.27e-09 | 15 |
organ system cancer | 1.05e-07 | 137 |
islet cell tumor | 1.12e-07 | 1 |
endocrine pancreas cancer | 1.12e-07 | 1 |
pancreatic endocrine carcinoma | 1.12e-07 | 1 |
paranasal sinus cancer | 2.23e-07 | 1 |
maxillary sinus cancer | 2.23e-07 | 1 |
cystadenocarcinoma | 3.02e-07 | 1 |
mucinous cystadenocarcinoma | 3.02e-07 | 1 |
pancreatic cancer | 5.36e-07 | 4 |