FFCP PHASE1:Hg19::chr5:89770738..89770749,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10622 | |EntrezGene=10622 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30075 | |HGNC=30075 | ||
|TSSclassifier=strong | |||
|UniProt=D6RJH6 | |UniProt=D6RJH6 | ||
|association_with_transcript=26bp_to_ENST00000514483_5end | |association_with_transcript=26bp_to_ENST00000514483_5end | ||
|cluster_id=chr5:89770738..89770749,+ | |||
|coexpression_cluster_id=C2832 | |coexpression_cluster_id=C2832 | ||
|description=CAGE_peak_4_at_POLR3G_5end | |description=CAGE_peak_4_at_POLR3G_5end | ||
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|ontology_enrichment_celltype=CL:0000066!4.92e-15!254;CL:0002321!9.27e-07!248 | |ontology_enrichment_celltype=CL:0000066!4.92e-15!254;CL:0002321!9.27e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.14e-24;5!CL:0000148;9.60e-12;10!CL:0000039;2.81e-11;7!CL:0000586;2.81e-11;7!CL:0000147;2.62e-08;14!CL:0000540;2.98e-08;6!CL:0000404;2.98e-08;6!CL:0002321;4.96e-08;15!CL:0002166;2.55e-07;3!CL:0002621;3.17e-07;3!CL:0002077;6.64e-07;34 | |ontology_enrichment_celltype_v019=CL:0002322;1.14e-24;5!CL:0000148;9.60e-12;10!CL:0000039;2.81e-11;7!CL:0000586;2.81e-11;7!CL:0000147;2.62e-08;14!CL:0000540;2.98e-08;6!CL:0000404;2.98e-08;6!CL:0002321;4.96e-08;15!CL:0002166;2.55e-07;3!CL:0002621;3.17e-07;3!CL:0002077;6.64e-07;34 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.02e-24,5;CL:0000148,8.90e-12,10;CL:0000541,8.90e-12,10;CL:0000039,2.43e-11,7;CL:0000586,2.43e-11,7;CL:0000147,2.49e-08,14;CL:0000540,2.98e-08,6;CL:0000031,2.98e-08,6;CL:0000404,2.98e-08,6;CL:0002077,1.13e-07,34;CL:0002166,2.11e-07,3;CL:0002621,2.18e-07,3;CL:0000221,6.96e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.49e-12;10!UBERON:0005564;4.49e-12;10!CL:0000031;2.98e-08;6 | |ontology_enrichment_development_v019=UBERON:0009117;4.49e-12;10!UBERON:0005564;4.49e-12;10!CL:0000031;2.98e-08;6 | ||
|ontology_enrichment_disease=DOID:14566!1.14e-19!239;DOID:162!5.62e-19!235;DOID:0050687!9.57e-12!143;DOID:305!2.27e-09!106;DOID:0050686!5.76e-07!137;DOID:1036!8.00e-07!8 | |ontology_enrichment_disease=DOID:14566!1.14e-19!239;DOID:162!5.62e-19!235;DOID:0050687!9.57e-12!143;DOID:305!2.27e-09!106;DOID:0050686!5.76e-07!137;DOID:1036!8.00e-07!8 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.00e-07;22!DOID:2994;2.00e-07;22 | |ontology_enrichment_disease_v019=DOID:3095;2.00e-07;22!DOID:2994;2.00e-07;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,1.86e-07,22;DOID:2994,1.86e-07,22 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.07e-10;8!UBERON:0000991;1.01e-07;21!UBERON:0001949;3.17e-07;3!UBERON:0003135;3.41e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0000473;7.07e-10;8!UBERON:0000991;1.01e-07;21!UBERON:0001949;3.17e-07;3!UBERON:0003135;3.41e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.25e-10,8;UBERON:0000991,9.92e-08,21;UBERON:0009196,9.92e-08,21;UBERON:0009117,9.92e-08,21;UBERON:0005564,9.92e-08,21;UBERON:0001949,2.18e-07,3;UBERON:0004176,2.38e-07,22;UBERON:0003135,3.12e-07,11 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.305653622991805,0.57470412614962,0.865818594450472,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,1.31694240986513,1.42169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0.361439152384566,0,0,0,0,0.378139268656271,0.443458794925128,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.446498641420399,0.44905874525234,0.450445921933289,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0.298897361103602,0,0,0.842704840213491,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0.375355559615893,0.277064115484183,0,0,0,0.340296549480063,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0,0,0.773043412653187,1.90922284413584,2.29443676311203,4.51302712679503,4.90360142789496,3.48581828608555,2.28054321033815,2.77552935963191,3.6497735907583,0,0,0,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0.441463099414651,0.368965315629341,0.343135620597051,0.98775256867763,0,1.00528972411631,0.370353780634118,0,0,1.44331342025273,0.231860809950154,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,1.51183915378974,4.11147782002921,0.716468181622786,1.16253575405585,0,0,0,0,0,0.12624243342638,1.14296209725904,0.763976851116555,0,0,0.925447434329912,0.600686115687835,1.71495859578347,0.112131084345361,0,0.22001485746285,0.258543431515556,0,0.845302752556,0,0,0.257207374262142,0,0.266422179016099,0.57191197463259,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.532685175939381,0.328508624055237,0.519254429183621,0.232420756919918,0.725156697549733,0.601519410909855,0.736647911487171,0.229628896329213,0,0,0,0.385076685522074,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0,0,0.223874754722178,0,0,0.512900250232778,0,0,0,0.183138929636687,0.247528499761764,0.574265537996172,0.650060246036521,0,0.096670718292122,0.308097234229289,0,0.413509717453592,0,0,0.170453254832202,0,0.826424576804891,0,0.510450849978337,0.4046311234222,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0.372158369359667,0.632758849437452,1.71567174531442,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0.281695602532241,0.430234056612155,0.196498082026242,0,0.354761064070598,0.211107635297664,0,0,0,0.577332676353072,0.670302275535787,2.17781969722645,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0.962479855263359,0.490080431962063,0.929015875628594,0.721346064882224,0.0711418433484141,0.318852545457645,0.199579371432817,0,0,0,0,0.228234679033192,0.156679895773023,0,0.169291777801603,0.321176150207399,0,0,0,0.307240764308458,0.223676107892416,0,0.390776190804081,1.11362469558097,0,0,0,0,0.561421621224659,0,0,0.445773537109913,0.568272293612826,0,0,0,0,0,0.111308705022906,0.824019371133798,0,0,0,0.251932747854276,0,0.246169610922139,0.311039587661807,0.269605053441981,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0.1137934482855,0,0.236387681767936,1.03423011972439,0.291604613383254,0.173624994933292,0,0,0,0,0,0,0.544692317594951,0,0,0.113942055847001,0,0.538545866458633,0,0,0.0915975934018623,0,1.02193298195737,0.31396051279005,0,1.35357396370308,0.784250137270958,0.839107934879214,1.3282761290693,0.317873157960757,0,0.163232808159148,0.282706142867882,0.216388639742091,0,0,0,0.593042257361244,0.123563938946503,0,0,0,0,0.182454789215666,0,0.485560759068186,0,0,0,0,0.751617097072463,0.518440956986236,0,0,0,0,0,0,0,0.195984794828755,0.522355239482415,0,0.171986032471617,0.19351266257817,0.146178634172371,0.0821154570532092,0,0,0.225980740780532,0.548167698587004,0.397429223405979,0,0,0,0,0,0,0,0.171594997861965,1.87271237384595,0.621262677827163,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0.360299883542404,0,0.0787831823072236,0.412079291905832,0.0674035438541849,0.295282444544246,1.43944664511834,0,0,7.07313853246084,7.01451126645892,8.72424709861289,0,0,0.182248669974074,0,0,0,0.105600336519406,0.35857467866569,0.575745591958336,0,0,0.25426853765475,0.542999601753713,0,0,0,0.82092520749339,0,0.79318464064088,0,0,0,0,0.342173675768659,0,0,0,0,0,0.395223263795889,0.243585196761792,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0,0.573409195690071,0,0.0620964029413835,0.138348634936231,1.37478448758317,0.909894705249887,0.570930667089935,0,0,0.28984205722165,0.149254802886874,0.467426619694449,0,0,0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| ||
|short_description=p4@POLR3G | |short_description=p4@POLR3G | ||
}} | }} |
Latest revision as of 04:34, 19 September 2015
Short description: | p4@POLR3G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_POLR3G_5end |
Coexpression cluster: | C2832_iPS_mesothelioma_testicular_teratocarcinoma_H9_HES3GFP_giant |
Association with transcript: | 26bp_to_ENST00000514483_5end |
EntrezGene: | POLR3G |
HGNC: | 30075 |
UniProt: | D6RJH6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.02e-24 | 5 |
melanocyte | 8.90e-12 | 10 |
melanoblast | 8.90e-12 | 10 |
germ line cell | 2.43e-11 | 7 |
germ cell | 2.43e-11 | 7 |
pigment cell | 2.49e-08 | 14 |
neuron | 2.98e-08 | 6 |
neuroblast | 2.98e-08 | 6 |
electrically signaling cell | 2.98e-08 | 6 |
ecto-epithelial cell | 1.13e-07 | 34 |
epithelial cell of Malassez | 2.11e-07 | 3 |
gingival epithelial cell | 2.18e-07 | 3 |
ectodermal cell | 6.96e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
testis | 6.25e-10 | 8 |
gonad | 9.92e-08 | 21 |
indifferent external genitalia | 9.92e-08 | 21 |
indifferent gonad | 9.92e-08 | 21 |
gonad primordium | 9.92e-08 | 21 |
gingival epithelium | 2.18e-07 | 3 |
external genitalia | 2.38e-07 | 22 |
male reproductive organ | 3.12e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.86e-07 | 22 |
germ cell cancer | 1.86e-07 | 22 |