FFCP PHASE1:Hg19::chr7:80546666..80546691,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:80546666..80546691,- | |||
|coexpression_cluster_id=C958 | |coexpression_cluster_id=C958 | ||
|description=CAGE_peak_at_chr7:80546666..80546691,- | |description=CAGE_peak_at_chr7:80546666..80546691,- | ||
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|ontology_enrichment_celltype=CL:0002334!3.37e-08!12;CL:0000055!1.34e-07!180;CL:0000499!2.13e-07!27;CL:0000153!7.21e-07!9;CL:0000447!7.21e-07!9 | |ontology_enrichment_celltype=CL:0002334!3.37e-08!12;CL:0000055!1.34e-07!180;CL:0000499!2.13e-07!27;CL:0000153!7.21e-07!9;CL:0000447!7.21e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000244;9.47e-13;4!CL:0000731;9.47e-13;4!CL:0000153;1.21e-12;9!CL:0000447;1.21e-12;9!CL:0000135;1.16e-09;3!CL:0000388;1.16e-09;3!CL:0000138;7.54e-09;6!CL:0000499;1.66e-07;28!CL:0000327;3.01e-07;15!CL:1000306;6.78e-07;4!CL:0002547;6.78e-07;4 | |ontology_enrichment_celltype_v019=CL:0000244;9.47e-13;4!CL:0000731;9.47e-13;4!CL:0000153;1.21e-12;9!CL:0000447;1.21e-12;9!CL:0000135;1.16e-09;3!CL:0000388;1.16e-09;3!CL:0000138;7.54e-09;6!CL:0000499;1.66e-07;28!CL:0000327;3.01e-07;15!CL:1000306;6.78e-07;4!CL:0002547;6.78e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000244,7.60e-13,4;CL:0000731,7.60e-13,4;CL:0000153,1.11e-12,9;CL:0000447,1.11e-12,9;CL:0000135,1.27e-09,3;CL:0000388,1.27e-09,3;CL:0000058,6.91e-09,6;CL:0000138,6.91e-09,6;CL:0000499,1.65e-07,28;CL:0000327,2.87e-07,15;CL:1000306,7.47e-07,4;CL:0002547,7.47e-07,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!1.74e-10!14 | |ontology_enrichment_disease=DOID:2394!1.74e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.96e-18;14!DOID:120;1.67e-08;27!DOID:193;8.74e-08;29 | |ontology_enrichment_disease_v019=DOID:2394;2.96e-18;14!DOID:120;1.67e-08;27!DOID:193;8.74e-08;29 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,5.22e-18,14;DOID:120,2.19e-08,27;DOID:193,1.12e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0005910!1.22e-07!6;UBERON:0000486!2.14e-07!82;UBERON:0000365!7.83e-07!5 | |ontology_enrichment_uberon=UBERON:0005910!1.22e-07!6;UBERON:0000486!2.14e-07!82;UBERON:0000365!7.83e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000486;1.07e-15;12!UBERON:0000365;3.39e-10;5!UBERON:0007846;1.16e-09;3!UBERON:0000043;1.16e-09;3!UBERON:0007845;1.16e-09;3!UBERON:0002118;3.68e-09;5!UBERON:0005910;1.72e-08;6!UBERON:0000992;3.17e-07;13!UBERON:0004797;6.78e-07;4!UBERON:0000415;6.78e-07;4!UBERON:0007240;6.78e-07;4!UBERON:0005742;6.78e-07;4!UBERON:0005734;6.78e-07;4!UBERON:0004664;6.78e-07;4!UBERON:0004663;6.78e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000486;1.07e-15;12!UBERON:0000365;3.39e-10;5!UBERON:0007846;1.16e-09;3!UBERON:0000043;1.16e-09;3!UBERON:0007845;1.16e-09;3!UBERON:0002118;3.68e-09;5!UBERON:0005910;1.72e-08;6!UBERON:0000992;3.17e-07;13!UBERON:0004797;6.78e-07;4!UBERON:0000415;6.78e-07;4!UBERON:0007240;6.78e-07;4!UBERON:0005742;6.78e-07;4!UBERON:0005734;6.78e-07;4!UBERON:0004664;6.78e-07;4!UBERON:0004663;6.78e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.85e-10,5;UBERON:0007846,1.27e-09,3;UBERON:0000043,1.27e-09,3;UBERON:0007845,1.27e-09,3;UBERON:0002118,5.69e-09,5;UBERON:0005910,1.49e-08,6;UBERON:0000992,4.34e-07,13;UBERON:0000415,7.47e-07,4;UBERON:0007240,7.47e-07,4;UBERON:0005742,7.47e-07,4;UBERON:0005734,7.47e-07,4;UBERON:0004664,7.47e-07,4;UBERON:0004663,7.47e-07,4 | |||
|phase1_expression=1.09007027562334,0.642301571672949,0.845726424575827,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4817354191524,0.50133791063589,3.62116297402059,4.7717156823066,0,0.756278537312543,0.443458794925128,1.22968699970376,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4666914686485,1.13967460498122,1.45650098894541,2.58152958673932,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97328599257748,0,0,0.600182192168805,0.206105058476878,1.28820270022815,0.37223371266318,1.85653965465393,0,0.252433774244115,0.276149695926898,0,4.26011511019937,0.906768884048762,0,0.773043412653187,4.63668405004419,2.58124135850103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0.392442930250692,0,0,0,0,0,0,0,0,0,0,1.02940686179115,0.658501712451753,0,0,0.0925884451585296,0,0,0,0.115930404975077,1.05667824812239,0,0,0,0.790204397959275,0,0,0,0,0,11.7587489739202,16.1623610856321,2.86587272649115,2.03443756959773,0.383382679165211,0,0,0,0,0,0.253991577168676,0,0,0,0,0,0,0,0,0.07333828582095,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61727252471503,2.61460037580088,1.59956785891291,0,0,0,0,0,0,3.04040744001916,0.61642896765115,0.895304816199478,0,0,0,0,0,0,0.773288812777695,0.837581326671744,1.91381625495949,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0.496215615637554,0.920771839728375,0.841980283299221,0.896974044789907,1.02341449813341,0.965123526861645,0,0.308419387605311,0.177561725313127,0.246381468041427,0.519254429183621,0.232420756919918,0,4.81215528727884,0,0.68888668898764,0.910455840033585,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,3.21367859688319,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0,0.170453254832202,0.178064071293475,4.13212288402445,0.384380134730212,0.638063562472921,0.30347334256665,0,1.5740617341532,0,0.924100740528266,0,0,0.37064843820784,0.858749320451947,0.372158369359667,0,0,0,0,0,0,0,0,0,0.606547444719948,1.58510321173008,0,0,3.89941583410055,0,0.545999645631943,0.141405431953713,0,0.551365343546124,2.65375590096488,0,0,0,0,0.92947049429925,0.281695602532241,0,0.0982490410131212,0,0.354761064070598,28.7106384004823,100.43494235277,0,0,0.769776901804097,0,1.08890984861323,0,4.73555909938353,1.68471475667626,3.10401107475673,54.4444458490494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,1.45632626099416,0,0.568272293612826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0.313932918407225,0,0,0.693373365065693,0,0,0,1.22308667769421,9.97518988335376,0,0,0,0,7.23700238870302,0.451961481561065,0,0,0,0,0,0,0,0,0.80175617316141,0,0,0,0,3.94122197613481,4.39331954511799,0.203996435272644,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,1.72844298240254,3.5924609612035,0,0,2.55582032678133,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0.544017803369474,0.2506898940227,1.53172788381731,0.983617892129413,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0.895528817321244,0,0.554805861502613,0,1.76097531226803,2.66943366478961,0.457680136793847,0.151230923763239,0.621748802331122,0.591420599958536,1.27437413730962,0.899606224327209,2.17368139626763,0.414706207840855,1.32920857278997,1.5652351854352,1.20206087197775,4.56966254602554,2.03435366602331,1.45478927362048,1.18151612746737,0,1.19428766609585,0,0.343395705182793,0,0,0.192619830407303,3.21662387062389,0,0.226705925512272,0,0,0,0.617602894321944,0.438568099157414,0,0,0.337884881306145,0,0,0.303859956177382,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0.109209638192014,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0.40341013740704,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0.255524855279191,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0,0.118193840883968,0.111231401892069,0,0,0,0,1.94334832096759,0,0.142953088353313,0,0,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0.102662806856247,0,0,0,0,2.49732190632894,0.79062257427272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0.458729283404541,0,0,0,0,0,2.23197010900051,1.38652688589425,9.51778436672336,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0.404234377916439,0,0,0,0.143444410785353,0.332660356546013,0.651226148887796,0.853818767021724,0,0,0,0,0,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| ||
|short_description=p@chr7:80546666..80546691,- | |short_description=p@chr7:80546666..80546691,- | ||
}} | }} |
Latest revision as of 12:01, 31 July 2015
Short description: | p@chr7:80546666..80546691, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:80546666..80546691, - |
Coexpression cluster: | C958_Synoviocyte_Urothelial_Fibroblast_Ewing_Mallassezderived_Chondrocyte_epithelioid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 7.60e-13 | 4 |
urothelial cell | 7.60e-13 | 4 |
GAG secreting cell | 1.11e-12 | 9 |
carbohydrate secreting cell | 1.11e-12 | 9 |
fibrocyte | 1.27e-09 | 3 |
tendon cell | 1.27e-09 | 3 |
chondroblast | 6.91e-09 | 6 |
chondrocyte | 6.91e-09 | 6 |
stromal cell | 1.65e-07 | 28 |
extracellular matrix secreting cell | 2.87e-07 | 15 |
fibroblast of tunica adventitia of artery | 7.47e-07 | 4 |
fibroblast of the aortic adventitia | 7.47e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.85e-10 | 5 |
dense regular connective tissue | 1.27e-09 | 3 |
tendon | 1.27e-09 | 3 |
regular connective tissue | 1.27e-09 | 3 |
right ovary | 5.69e-09 | 5 |
transitional epithelium | 1.49e-08 | 6 |
female gonad | 4.34e-07 | 13 |
artery wall | 7.47e-07 | 4 |
tunica adventitia of artery | 7.47e-07 | 4 |
adventitia | 7.47e-07 | 4 |
tunica adventitia of blood vessel | 7.47e-07 | 4 |
aorta tunica adventitia | 7.47e-07 | 4 |
aorta wall | 7.47e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.22e-18 | 14 |
female reproductive organ cancer | 2.19e-08 | 27 |
reproductive organ cancer | 1.12e-07 | 29 |