FFCP PHASE1:Hg19::chr3:126675939..126675962,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84303 | |EntrezGene=84303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28184 | |HGNC=28184 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=86bp_to_ENST00000510044_5end | |association_with_transcript=86bp_to_ENST00000510044_5end | ||
|cluster_id=chr3:126675939..126675962,+ | |||
|coexpression_cluster_id=C1500 | |coexpression_cluster_id=C1500 | ||
|description=CAGE_peak_3_at_CHCHD6_5end | |description=CAGE_peak_3_at_CHCHD6_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000148!1.52e-38!10;CL:0000541!1.52e-38!10;CL:0000147!3.52e-34!14;CL:0002619!5.77e-20!3;CL:0002567!2.15e-19!3;CL:0000710!1.05e-18!20;CL:0000235!2.81e-15!10;CL:0000075!1.50e-13!27;CL:0002274!1.44e-11!5;CL:0000457!1.44e-11!5;CL:0002191!1.44e-11!5;CL:0000097!1.44e-11!5;CL:0000831!1.44e-11!5;CL:0002028!1.44e-11!5;CL:0000325!2.47e-11!39;CL:0002077!7.16e-11!33;CL:0000839!1.60e-08!70;CL:0000557!2.24e-08!71;CL:0000333!4.55e-08!41;CL:0000766!1.05e-07!76;CL:0002566!1.25e-07!1;CL:0000149!5.55e-07!4 | |ontology_enrichment_celltype=CL:0000148!1.52e-38!10;CL:0000541!1.52e-38!10;CL:0000147!3.52e-34!14;CL:0002619!5.77e-20!3;CL:0002567!2.15e-19!3;CL:0000710!1.05e-18!20;CL:0000235!2.81e-15!10;CL:0000075!1.50e-13!27;CL:0002274!1.44e-11!5;CL:0000457!1.44e-11!5;CL:0002191!1.44e-11!5;CL:0000097!1.44e-11!5;CL:0000831!1.44e-11!5;CL:0002028!1.44e-11!5;CL:0000325!2.47e-11!39;CL:0002077!7.16e-11!33;CL:0000839!1.60e-08!70;CL:0000557!2.24e-08!71;CL:0000333!4.55e-08!41;CL:0000766!1.05e-07!76;CL:0002566!1.25e-07!1;CL:0000149!5.55e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000148;8.30e-42;10!CL:0002619;2.49e-36;3!CL:0000147;8.09e-30;14!CL:0000710;8.31e-21;20!CL:0000235;3.04e-18;6!CL:0002567;7.90e-17;3!CL:0000075;2.44e-15;27!CL:0002566;6.43e-13;1!CL:0002077;2.16e-10;34 | |ontology_enrichment_celltype_v019=CL:0000148;8.30e-42;10!CL:0002619;2.49e-36;3!CL:0000147;8.09e-30;14!CL:0000710;8.31e-21;20!CL:0000235;3.04e-18;6!CL:0002567;7.90e-17;3!CL:0000075;2.44e-15;27!CL:0002566;6.43e-13;1!CL:0002077;2.16e-10;34 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,8.01e-42,10;CL:0000541,8.01e-42,10;CL:0002619,2.65e-36,3;CL:0000147,7.89e-30,14;CL:0000710,8.17e-21,20;CL:0000235,2.95e-18,6;CL:0002567,7.90e-17,3;CL:0000075,2.41e-15,27;CL:0002566,5.38e-13,1;CL:0002077,4.05e-12,34;CL:0000333,1.66e-09,41;CL:0000839,5.32e-08,66;CL:0000557,7.13e-08,67;CL:0000766,2.74e-07,72;CL:0002194,9.51e-07,59;CL:0000576,9.51e-07,59;CL:0000040,9.51e-07,59;CL:0000559,9.51e-07,59 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1909!1.04e-13!2 | |ontology_enrichment_disease=DOID:1909!1.04e-13!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;1.85e-24;2 | |ontology_enrichment_disease_v019=DOID:1909;1.85e-24;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,1.85e-24,2 | |||
|ontology_enrichment_uberon=UBERON:0000029!2.50e-07!1;UBERON:0002371!3.16e-07!80 | |ontology_enrichment_uberon=UBERON:0000029!2.50e-07!1;UBERON:0002371!3.16e-07!80 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.09e-07,76 | |||
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|short_description=p3@CHCHD6 | |short_description=p3@CHCHD6 | ||
}} | }} |
Latest revision as of 04:48, 20 September 2015
Short description: | p3@CHCHD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CHCHD6_5end |
Coexpression cluster: | C1500_Melanocyte_Monocytederived_CD14_melanoma_retina_Macrophage_Mast |
Association with transcript: | 86bp_to_ENST00000510044_5end |
EntrezGene: | CHCHD6 |
HGNC: | 28184 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 8.01e-42 | 10 |
melanoblast | 8.01e-42 | 10 |
adult endothelial progenitor cell | 2.65e-36 | 3 |
pigment cell | 7.89e-30 | 14 |
neurecto-epithelial cell | 8.17e-21 | 20 |
macrophage | 2.95e-18 | 6 |
light melanocyte | 7.90e-17 | 3 |
columnar/cuboidal epithelial cell | 2.41e-15 | 27 |
dark melanocyte | 5.38e-13 | 1 |
ecto-epithelial cell | 4.05e-12 | 34 |
migratory neural crest cell | 1.66e-09 | 41 |
myeloid lineage restricted progenitor cell | 5.32e-08 | 66 |
granulocyte monocyte progenitor cell | 7.13e-08 | 67 |
myeloid leukocyte | 2.74e-07 | 72 |
monopoietic cell | 9.51e-07 | 59 |
monocyte | 9.51e-07 | 59 |
monoblast | 9.51e-07 | 59 |
promonocyte | 9.51e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.09e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.85e-24 | 2 |