FFCP PHASE1:Hg19::chr12:2742907..2742921,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:2742907..2742921,+ | |||
|description=CAGE_peak_at_chr12:2742907..2742921,+ | |description=CAGE_peak_at_chr12:2742907..2742921,+ | ||
|id=chr12:2742907..2742921,+ | |id=chr12:2742907..2742921,+ | ||
|ontology_enrichment_celltype=CL:0002144!2.50e-09!3;CL:0002150!9.31e-08!3;CL:0000861!9.31e-08!3 | |ontology_enrichment_celltype=CL:0002144!2.50e-09!3;CL:0002150!9.31e-08!3;CL:0000861!9.31e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002144;1.06e-27;3!CL:0002178;7.50e-08;3 | |ontology_enrichment_celltype_v019=CL:0002144;1.06e-27;3!CL:0002178;7.50e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002144,1.06e-27,3;CL:0002178,7.76e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.98e-21;1!UBERON:0003056;7.50e-08;3 | |ontology_enrichment_development_v019=UBERON:0005425;6.98e-21;1!UBERON:0003056;7.50e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4929;1.82e-11;2!DOID:4074;2.73e-11;2!DOID:4905;2.73e-11;2!DOID:3493;2.73e-11;2!DOID:3498;2.73e-11;2!DOID:299;8.32e-08;25 | |ontology_enrichment_disease_v019=DOID:4929;1.82e-11;2!DOID:4074;2.73e-11;2!DOID:4905;2.73e-11;2!DOID:3493;2.73e-11;2!DOID:3498;2.73e-11;2!DOID:299;8.32e-08;25 | ||
|ontology_enrichment_disease_v019_2=DOID:4929,1.82e-11,2;DOID:3493,2.73e-11,2;DOID:4074,3.02e-11,2;DOID:4905,3.02e-11,2;DOID:3498,3.02e-11,2;DOID:299,8.41e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.95e-23!115;UBERON:0001915!2.50e-09!3;UBERON:0001982!2.50e-09!3;UBERON:0001049!3.89e-08!57;UBERON:0005068!3.89e-08!57;UBERON:0006241!3.89e-08!57;UBERON:0007135!3.89e-08!57;UBERON:0001893!1.98e-07!34;UBERON:0002780!6.49e-07!41;UBERON:0001890!6.49e-07!41;UBERON:0006240!6.49e-07!41;UBERON:0001869!8.80e-07!32 | |ontology_enrichment_uberon=UBERON:0007023!2.95e-23!115;UBERON:0001915!2.50e-09!3;UBERON:0001982!2.50e-09!3;UBERON:0001049!3.89e-08!57;UBERON:0005068!3.89e-08!57;UBERON:0006241!3.89e-08!57;UBERON:0007135!3.89e-08!57;UBERON:0001893!1.98e-07!34;UBERON:0002780!6.49e-07!41;UBERON:0001890!6.49e-07!41;UBERON:0006240!6.49e-07!41;UBERON:0001869!8.80e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0010523;1.06e-27;3!UBERON:0001915;1.06e-27;3!UBERON:0001982;1.06e-27;3!UBERON:0004913;1.53e-21;1!UBERON:0003703;1.53e-21;1!UBERON:0001174;1.53e-21;1!UBERON:0004914;1.53e-21;1!UBERON:0000941;6.98e-21;1!UBERON:0001785;6.98e-21;1!UBERON:0002464;6.98e-21;1!UBERON:0004904;6.98e-21;1!UBERON:0001021;6.98e-21;1!UBERON:0003127;3.89e-11;2!UBERON:0003714;3.89e-11;2!UBERON:0005162;3.89e-11;2!UBERON:0000122;3.89e-11;2!UBERON:0002114;4.52e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0010523;1.06e-27;3!UBERON:0001915;1.06e-27;3!UBERON:0001982;1.06e-27;3!UBERON:0004913;1.53e-21;1!UBERON:0003703;1.53e-21;1!UBERON:0001174;1.53e-21;1!UBERON:0004914;1.53e-21;1!UBERON:0000941;6.98e-21;1!UBERON:0001785;6.98e-21;1!UBERON:0002464;6.98e-21;1!UBERON:0004904;6.98e-21;1!UBERON:0001021;6.98e-21;1!UBERON:0003127;3.89e-11;2!UBERON:0003714;3.89e-11;2!UBERON:0005162;3.89e-11;2!UBERON:0000122;3.89e-11;2!UBERON:0002114;4.52e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,1.06e-27,3;UBERON:0001915,1.06e-27,3;UBERON:0001982,1.06e-27,3;UBERON:0004913,1.53e-21,1;UBERON:0003703,1.53e-21,1;UBERON:0001174,1.53e-21,1;UBERON:0004914,1.53e-21,1;UBERON:0000941,6.31e-21,1;UBERON:0001785,6.31e-21,1;UBERON:0002464,6.31e-21,1;UBERON:0004904,6.31e-21,1;UBERON:0001021,6.31e-21,1;UBERON:0003902,6.31e-21,1;UBERON:0005425,6.31e-21,1;UBERON:0003714,3.70e-11,2;UBERON:0005162,3.70e-11,2;UBERON:0000122,3.70e-11,2;UBERON:0003127,4.52e-11,2;UBERON:0002114,4.52e-08,2 | |||
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| ||
|short_description=p@chr12:2742907..2742921,+ | |short_description=p@chr12:2742907..2742921,+ | ||
}} | }} |
Latest revision as of 07:53, 24 July 2015
Short description: | p@chr12:2742907..2742921, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:2742907..2742921, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 1.06e-27 | 3 |
epithelial cell of stomach | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 1.06e-27 | 3 |
endothelium of capillary | 1.06e-27 | 3 |
capillary | 1.06e-27 | 3 |
hepatopancreatic ampulla | 1.53e-21 | 1 |
extrahepatic bile duct | 1.53e-21 | 1 |
common bile duct | 1.53e-21 | 1 |
duodenal papilla | 1.53e-21 | 1 |
cranial nerve II | 6.31e-21 | 1 |
cranial nerve | 6.31e-21 | 1 |
nerve trunk | 6.31e-21 | 1 |
nerve connecting eye with brain | 6.31e-21 | 1 |
nerve | 6.31e-21 | 1 |
retinal neural layer | 6.31e-21 | 1 |
presumptive neural retina | 6.31e-21 | 1 |
neural tissue | 3.70e-11 | 2 |
multi cell component structure | 3.70e-11 | 2 |
neuron projection bundle | 3.70e-11 | 2 |
open tracheal system trachea | 4.52e-11 | 2 |
duodenum | 4.52e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.82e-11 | 2 |
signet ring cell adenocarcinoma | 2.73e-11 | 2 |
pancreas adenocarcinoma | 3.02e-11 | 2 |
pancreatic carcinoma | 3.02e-11 | 2 |
pancreatic ductal adenocarcinoma | 3.02e-11 | 2 |
adenocarcinoma | 8.41e-08 | 25 |