FFCP PHASE1:Hg19::chr1:214175769..214175774,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:214175769..214175774,+ | |||
|coexpression_cluster_id=C931 | |coexpression_cluster_id=C931 | ||
|description=CAGE_peak_at_chr1:214175769..214175774,+ | |description=CAGE_peak_at_chr1:214175769..214175774,+ | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.59e-19;12!CL:0002144;2.73e-09;3!CL:0000167;1.39e-07;1!CL:0000164;1.39e-07;1!CL:0000502;1.39e-07;1!CL:0000172;1.39e-07;1!CL:0002553;1.39e-07;1!CL:0000173;1.39e-07;1 | |ontology_enrichment_celltype_v019=CL:0000182;1.59e-19;12!CL:0002144;2.73e-09;3!CL:0000167;1.39e-07;1!CL:0000164;1.39e-07;1!CL:0000502;1.39e-07;1!CL:0000172;1.39e-07;1!CL:0002553;1.39e-07;1!CL:0000173;1.39e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.44e-19,12;CL:0002144,2.73e-09,3;CL:0002553,1.18e-07,1;CL:0000167,1.26e-07,1;CL:0000164,1.26e-07,1;CL:0000502,1.26e-07,1;CL:0000172,1.26e-07,1;CL:0000173,1.26e-07,1;CL:0002351,1.26e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;7.70e-08;1!CL:0002351;1.39e-07;1 | |ontology_enrichment_development_v019=UBERON:0005425;7.70e-08;1!CL:0002351;1.39e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;9.96e-11;10!DOID:0050619;3.43e-08;1!DOID:1357;3.43e-08;1!DOID:4430;1.39e-07;1 | |ontology_enrichment_disease_v019=DOID:171;9.96e-11;10!DOID:0050619;3.43e-08;1!DOID:1357;3.43e-08;1!DOID:4430;1.39e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:171,9.72e-11,10;DOID:0050619,3.55e-08,1;DOID:1357,3.55e-08,1;DOID:4430,1.26e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.80e-15!94;UBERON:0001016!2.80e-15!94;UBERON:0001017!1.18e-14!82;UBERON:0005743!3.82e-14!86;UBERON:0001049!2.49e-12!57;UBERON:0005068!2.49e-12!57;UBERON:0006241!2.49e-12!57;UBERON:0007135!2.49e-12!57;UBERON:0000955!2.01e-11!69;UBERON:0006238!2.01e-11!69;UBERON:0002780!1.71e-10!41;UBERON:0001890!1.71e-10!41;UBERON:0006240!1.71e-10!41;UBERON:0007023!2.29e-10!115;UBERON:0002346!4.27e-10!90;UBERON:0003080!4.46e-10!42;UBERON:0002616!9.54e-10!59;UBERON:0003075!1.43e-08!86;UBERON:0007284!1.43e-08!86;UBERON:0003056!2.57e-07!61;UBERON:0000924!3.36e-07!173;UBERON:0006601!3.36e-07!173;UBERON:0002020!3.49e-07!34;UBERON:0003528!3.49e-07!34;UBERON:0002308!4.86e-07!9;UBERON:0000125!4.86e-07!9;UBERON:0001893!6.15e-07!34;UBERON:0002420!8.12e-07!9;UBERON:0007245!8.12e-07!9;UBERON:0010009!8.12e-07!9;UBERON:0010011!8.12e-07!9;UBERON:0000454!8.12e-07!9 | |ontology_enrichment_uberon=UBERON:0000073!2.80e-15!94;UBERON:0001016!2.80e-15!94;UBERON:0001017!1.18e-14!82;UBERON:0005743!3.82e-14!86;UBERON:0001049!2.49e-12!57;UBERON:0005068!2.49e-12!57;UBERON:0006241!2.49e-12!57;UBERON:0007135!2.49e-12!57;UBERON:0000955!2.01e-11!69;UBERON:0006238!2.01e-11!69;UBERON:0002780!1.71e-10!41;UBERON:0001890!1.71e-10!41;UBERON:0006240!1.71e-10!41;UBERON:0007023!2.29e-10!115;UBERON:0002346!4.27e-10!90;UBERON:0003080!4.46e-10!42;UBERON:0002616!9.54e-10!59;UBERON:0003075!1.43e-08!86;UBERON:0007284!1.43e-08!86;UBERON:0003056!2.57e-07!61;UBERON:0000924!3.36e-07!173;UBERON:0006601!3.36e-07!173;UBERON:0002020!3.49e-07!34;UBERON:0003528!3.49e-07!34;UBERON:0002308!4.86e-07!9;UBERON:0000125!4.86e-07!9;UBERON:0001893!6.15e-07!34;UBERON:0002420!8.12e-07!9;UBERON:0007245!8.12e-07!9;UBERON:0010009!8.12e-07!9;UBERON:0010011!8.12e-07!9;UBERON:0000454!8.12e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.88e-12;19!UBERON:0006925;3.88e-12;19!UBERON:0010523;2.73e-09;3!UBERON:0001915;2.73e-09;3!UBERON:0001982;2.73e-09;3!UBERON:0002423;4.33e-09;25!UBERON:0002368;1.77e-08;33!UBERON:0001764;3.43e-08;1!UBERON:0001825;3.43e-08;1!UBERON:0000941;7.70e-08;1!UBERON:0001785;7.70e-08;1!UBERON:0002464;7.70e-08;1!UBERON:0004904;7.70e-08;1!UBERON:0001021;7.70e-08;1!UBERON:0002346;1.01e-07;4!UBERON:0000923;1.01e-07;4!UBERON:0010316;1.01e-07;4!UBERON:0005291;1.01e-07;4!UBERON:0002365;4.65e-07;31!UBERON:0002330;4.65e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0002107;3.88e-12;19!UBERON:0006925;3.88e-12;19!UBERON:0010523;2.73e-09;3!UBERON:0001915;2.73e-09;3!UBERON:0001982;2.73e-09;3!UBERON:0002423;4.33e-09;25!UBERON:0002368;1.77e-08;33!UBERON:0001764;3.43e-08;1!UBERON:0001825;3.43e-08;1!UBERON:0000941;7.70e-08;1!UBERON:0001785;7.70e-08;1!UBERON:0002464;7.70e-08;1!UBERON:0004904;7.70e-08;1!UBERON:0001021;7.70e-08;1!UBERON:0002346;1.01e-07;4!UBERON:0000923;1.01e-07;4!UBERON:0010316;1.01e-07;4!UBERON:0005291;1.01e-07;4!UBERON:0002365;4.65e-07;31!UBERON:0002330;4.65e-07;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.66e-12,19;UBERON:0006925,3.66e-12,19;UBERON:0008836,3.66e-12,19;UBERON:0008835,1.99e-10,22;UBERON:0003894,1.99e-10,22;UBERON:0009854,5.97e-10,23;UBERON:0010523,2.73e-09,3;UBERON:0001915,2.73e-09,3;UBERON:0001982,2.73e-09,3;UBERON:0007499,4.14e-09,25;UBERON:0009497,4.14e-09,25;UBERON:0000015,4.14e-09,25;UBERON:0002423,4.14e-09,25;UBERON:0006235,4.14e-09,25;UBERON:0004161,4.14e-09,25;UBERON:0009856,9.77e-09,26;UBERON:0002368,2.07e-08,35;UBERON:0001764,3.55e-08,1;UBERON:0001825,3.55e-08,1;UBERON:0000941,6.97e-08,1;UBERON:0001785,6.97e-08,1;UBERON:0002464,6.97e-08,1;UBERON:0004904,6.97e-08,1;UBERON:0001021,6.97e-08,1;UBERON:0003902,6.97e-08,1;UBERON:0005425,6.97e-08,1;UBERON:0002365,3.11e-07,31;UBERON:0002330,3.11e-07,31 | |||
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| ||
|short_description=p@chr1:214175769..214175774,+ | |short_description=p@chr1:214175769..214175774,+ | ||
}} | }} |
Latest revision as of 03:45, 28 July 2015
Short description: | p@chr1:214175769..214175774, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:214175769..214175774, + |
Coexpression cluster: | C931_neuroectodermal_peripheral_maxillary_gastrointestinal_Hepatocyte_small_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.44e-19 | 12 |
capillary endothelial cell | 2.73e-09 | 3 |
lung fibroblast | 1.18e-07 | 1 |
peptide hormone secreting cell | 1.26e-07 | 1 |
enteroendocrine cell | 1.26e-07 | 1 |
type D enteroendocrine cell | 1.26e-07 | 1 |
somatostatin secreting cell | 1.26e-07 | 1 |
pancreatic D cell | 1.26e-07 | 1 |
progenitor cell of endocrine pancreas | 1.26e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 3.66e-12 | 19 |
digestive gland | 3.66e-12 | 19 |
liver bud | 3.66e-12 | 19 |
hepatic diverticulum | 1.99e-10 | 22 |
liver primordium | 1.99e-10 | 22 |
digestive tract diverticulum | 5.97e-10 | 23 |
microcirculatory vessel | 2.73e-09 | 3 |
endothelium of capillary | 2.73e-09 | 3 |
capillary | 2.73e-09 | 3 |
epithelial sac | 4.14e-09 | 25 |
epithelium of foregut-midgut junction | 4.14e-09 | 25 |
anatomical boundary | 4.14e-09 | 25 |
hepatobiliary system | 4.14e-09 | 25 |
foregut-midgut junction | 4.14e-09 | 25 |
septum transversum | 4.14e-09 | 25 |
sac | 9.77e-09 | 26 |
endocrine gland | 2.07e-08 | 35 |
maxillary sinus | 3.55e-08 | 1 |
paranasal sinus | 3.55e-08 | 1 |
cranial nerve II | 6.97e-08 | 1 |
cranial nerve | 6.97e-08 | 1 |
nerve trunk | 6.97e-08 | 1 |
nerve connecting eye with brain | 6.97e-08 | 1 |
nerve | 6.97e-08 | 1 |
retinal neural layer | 6.97e-08 | 1 |
presumptive neural retina | 6.97e-08 | 1 |
exocrine gland | 3.11e-07 | 31 |
exocrine system | 3.11e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 9.72e-11 | 10 |
paranasal sinus cancer | 3.55e-08 | 1 |
maxillary sinus cancer | 3.55e-08 | 1 |
somatostatinoma | 1.26e-07 | 1 |