FFCP PHASE1:Hg19::chr21:34915147..34915178,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:34915147..34915178,-
|short_description=p3@GART
|description=CAGE_peak_3_at_GART_5end
|association_with_transcript=0bp_to_ENST00000381831,ENST00000381839_...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2618 | |EntrezGene=2618 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4163 | |HGNC=4163 | ||
|TSSclassifier=strong | |||
|UniProt=P22102 | |UniProt=P22102 | ||
|association_with_transcript=0bp_to_ENST00000381831,ENST00000381839_5end | |||
|cluster_id=chr21:34915147..34915178,- | |||
|coexpression_cluster_id=C1768 | |||
|description=CAGE_peak_3_at_GART_5end | |||
|id=chr21:34915147..34915178,- | |||
|ontology_enrichment_celltype=CL:0000738!1.48e-26!140;CL:0000037!3.47e-25!172;CL:0000566!3.47e-25!172;CL:0000988!1.88e-24!182;CL:0002031!2.55e-23!124;CL:0002032!4.00e-23!165;CL:0000837!4.00e-23!165;CL:0002057!2.34e-21!42;CL:0000860!2.37e-21!45;CL:0002087!3.44e-21!119;CL:0000766!1.64e-13!76;CL:0000763!3.57e-12!112;CL:0000049!3.57e-12!112;CL:0000838!1.27e-11!52;CL:0000839!2.03e-11!70;CL:0000542!3.03e-11!53;CL:0000051!3.03e-11!53;CL:0000557!6.03e-11!71;CL:0002009!1.39e-10!65;CL:0000219!4.93e-10!390;CL:0002194!5.49e-10!63;CL:0000576!5.49e-10!63;CL:0000040!5.49e-10!63;CL:0000559!5.49e-10!63;CL:0000134!5.33e-09!358;CL:0002320!1.00e-08!365;CL:0000791!2.00e-07!18;CL:0000789!2.00e-07!18;CL:0002420!2.00e-07!18;CL:0002419!2.00e-07!18;CL:0000790!2.00e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.52e-15;33!CL:0002057;1.52e-15;33!CL:0000576;1.66e-10;48!CL:0000473;2.13e-09;39!CL:0000234;2.13e-09;39!CL:0000766;2.06e-08;69!CL:0002087;5.32e-08;104!CL:0000791;5.33e-08;18!CL:0000789;5.33e-08;18!CL:0002419;5.33e-08;18!CL:0000542;3.58e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.02e-27,136;CL:0000037,4.95e-26,168;CL:0000988,1.08e-25,177;CL:0002031,6.64e-24,120;CL:0002032,6.74e-24,161;CL:0000837,6.74e-24,161;CL:0000860,5.24e-22,42;CL:0002057,5.24e-22,42;CL:0002087,1.07e-21,115;CL:0000473,2.37e-16,48;CL:0000234,2.37e-16,48;CL:0000766,5.31e-14,72;CL:0000763,1.42e-12,108;CL:0000049,1.42e-12,108;CL:0000838,6.09e-12,52;CL:0000839,1.22e-11,66;CL:0000542,1.49e-11,53;CL:0000051,1.49e-11,53;CL:0000557,2.66e-11,67;CL:0002009,8.86e-11,61;CL:0000219,2.10e-10,386;CL:0002194,3.71e-10,59;CL:0000576,3.71e-10,59;CL:0000040,3.71e-10,59;CL:0000559,3.71e-10,59;CL:0000134,2.52e-09,354;CL:0002320,4.82e-09,361;CL:0000791,1.28e-07,18;CL:0000789,1.28e-07,18;CL:0002420,1.28e-07,18;CL:0002419,1.28e-07,18;CL:0000790,1.28e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;5.21e-16;42!CL:0000790;5.33e-08;18!CL:0000051;3.58e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.96e-09!102;UBERON:0003061!2.96e-09!102;UBERON:0002371!7.55e-09!80;UBERON:0001474!5.00e-08!86;UBERON:0002384!1.38e-07!375;UBERON:0002193!3.96e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.70e-10,98;UBERON:0003061,6.70e-10,98;UBERON:0002371,2.02e-09,76;UBERON:0001474,1.18e-08,82;UBERON:0002384,6.79e-08,371;UBERON:0002193,1.03e-07,108;UBERON:0000073,2.46e-07,53;UBERON:0002616,2.46e-07,53;UBERON:0001049,2.58e-07,56;UBERON:0005068,2.58e-07,56;UBERON:0006241,2.58e-07,56;UBERON:0007135,2.58e-07,56;UBERON:0002405,5.13e-07,93;UBERON:0004765,7.58e-07,90 | |||
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| ||
|short_description=p3@GART | |||
}} | }} |
Latest revision as of 04:45, 18 September 2015
Short description: | p3@GART |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GART_5end |
Coexpression cluster: | C1768_testis_CD8_Natural_embryonic_Eosinophils_CD4_CD14 |
Association with transcript: | 0bp_to_ENST00000381831, ENST00000381839_5end |
EntrezGene: | GART |
HGNC: | 4163 |
UniProt: | P22102 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.70e-10 | 98 |
blood island | 6.70e-10 | 98 |
bone marrow | 2.02e-09 | 76 |
bone element | 1.18e-08 | 82 |
connective tissue | 6.79e-08 | 371 |
hemolymphoid system | 1.03e-07 | 108 |
regional part of nervous system | 2.46e-07 | 53 |
regional part of brain | 2.46e-07 | 53 |
neural tube | 2.58e-07 | 56 |
neural rod | 2.58e-07 | 56 |
future spinal cord | 2.58e-07 | 56 |
neural keel | 2.58e-07 | 56 |
immune system | 5.13e-07 | 93 |
skeletal element | 7.58e-07 | 90 |