FFCP PHASE1:Hg19::chr5:75379091..75379100,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22987 | |EntrezGene=22987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30670 | |HGNC=30670 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=94bp_to_ENST00000502798_5end | |association_with_transcript=94bp_to_ENST00000502798_5end | ||
|cluster_id=chr5:75379091..75379100,+ | |||
|coexpression_cluster_id=C35 | |coexpression_cluster_id=C35 | ||
|description=CAGE_peak_6_at_SV2C_5end | |description=CAGE_peak_6_at_SV2C_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.74e-57;2!UBERON:0006222;2.73e-29;1!UBERON:0006241;1.04e-10;3!UBERON:0003057;1.04e-10;3 | |ontology_enrichment_development_v019=UBERON:0010122;1.74e-57;2!UBERON:0006222;2.73e-29;1!UBERON:0006241;1.04e-10;3!UBERON:0003057;1.04e-10;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.49e-68!57;UBERON:0005068!4.49e-68!57;UBERON:0006241!4.49e-68!57;UBERON:0007135!4.49e-68!57;UBERON:0002616!1.95e-56!59;UBERON:0000955!5.05e-54!69;UBERON:0006238!5.05e-54!69;UBERON:0002346!1.29e-53!90;UBERON:0003075!5.64e-53!86;UBERON:0007284!5.64e-53!86;UBERON:0005743!3.82e-52!86;UBERON:0001017!1.47e-51!82;UBERON:0002020!3.26e-50!34;UBERON:0003528!3.26e-50!34;UBERON:0000073!1.10e-49!94;UBERON:0001016!1.10e-49!94;UBERON:0002780!2.05e-45!41;UBERON:0001890!2.05e-45!41;UBERON:0006240!2.05e-45!41;UBERON:0001893!8.54e-45!34;UBERON:0003080!3.05e-44!42;UBERON:0001869!7.80e-43!32;UBERON:0002791!2.61e-41!33;UBERON:0007023!7.26e-41!115;UBERON:0002308!4.75e-34!9;UBERON:0000125!4.75e-34!9;UBERON:0000033!4.18e-32!123;UBERON:0003056!4.34e-32!61;UBERON:0000924!1.89e-31!173;UBERON:0006601!1.89e-31!173;UBERON:0004121!2.01e-30!169;UBERON:0000153!2.60e-30!129;UBERON:0007811!2.60e-30!129;UBERON:0001950!7.56e-30!20;UBERON:0002619!4.93e-27!22;UBERON:0002420!1.42e-25!9;UBERON:0007245!1.42e-25!9;UBERON:0010009!1.42e-25!9;UBERON:0010011!1.42e-25!9;UBERON:0000454!1.42e-25!9;UBERON:0009663!8.39e-25!7;UBERON:0003076!1.07e-24!15;UBERON:0003057!1.07e-24!15;UBERON:0000956!1.27e-23!25;UBERON:0000203!1.27e-23!25;UBERON:0002298!2.63e-21!8;UBERON:0000025!4.08e-21!194;UBERON:0000369!1.79e-20!4;UBERON:0002435!1.79e-20!4;UBERON:0000204!1.79e-20!4;UBERON:0010082!1.79e-20!4;UBERON:0004733!7.07e-19!12;UBERON:0002028!7.07e-19!12;UBERON:0007277!7.07e-19!12;UBERON:0004732!2.37e-17!13;UBERON:0005383!4.19e-16!3;UBERON:0005382!4.19e-16!3;UBERON:0001872!9.74e-16!5;UBERON:0004111!1.37e-15!241;UBERON:0000988!2.21e-15!3;UBERON:0006331!2.55e-15!3;UBERON:0000064!6.60e-14!219;UBERON:0000483!1.96e-13!309;UBERON:0000119!3.13e-13!312;UBERON:0002680!3.42e-13!9;UBERON:0001895!3.42e-13!9;UBERON:0010092!3.42e-13!9;UBERON:0000477!5.12e-13!286;UBERON:0000200!5.34e-13!6;UBERON:0001873!2.57e-11!2;UBERON:0010122!2.57e-11!2;UBERON:0002148!3.46e-11!2;UBERON:0009662!3.46e-11!2;UBERON:0001871!1.63e-09!7;UBERON:0000475!2.64e-09!365;UBERON:0002021!3.51e-09!5;UBERON:0002240!1.44e-07!3;UBERON:0001896!1.69e-07!3;UBERON:0005290!1.69e-07!3;UBERON:0010096!1.69e-07!3;UBERON:0002771!2.11e-07!3;UBERON:0003978!2.89e-07!3;UBERON:0009751!2.89e-07!3;UBERON:0000946!2.89e-07!3;UBERON:0002523!2.89e-07!3;UBERON:0005983!2.89e-07!3;UBERON:0002165!2.89e-07!3;UBERON:0002062!2.89e-07!3;UBERON:0007280!2.89e-07!3;UBERON:0000481!5.49e-07!347;UBERON:0000062!7.78e-07!511 | |ontology_enrichment_uberon=UBERON:0001049!4.49e-68!57;UBERON:0005068!4.49e-68!57;UBERON:0006241!4.49e-68!57;UBERON:0007135!4.49e-68!57;UBERON:0002616!1.95e-56!59;UBERON:0000955!5.05e-54!69;UBERON:0006238!5.05e-54!69;UBERON:0002346!1.29e-53!90;UBERON:0003075!5.64e-53!86;UBERON:0007284!5.64e-53!86;UBERON:0005743!3.82e-52!86;UBERON:0001017!1.47e-51!82;UBERON:0002020!3.26e-50!34;UBERON:0003528!3.26e-50!34;UBERON:0000073!1.10e-49!94;UBERON:0001016!1.10e-49!94;UBERON:0002780!2.05e-45!41;UBERON:0001890!2.05e-45!41;UBERON:0006240!2.05e-45!41;UBERON:0001893!8.54e-45!34;UBERON:0003080!3.05e-44!42;UBERON:0001869!7.80e-43!32;UBERON:0002791!2.61e-41!33;UBERON:0007023!7.26e-41!115;UBERON:0002308!4.75e-34!9;UBERON:0000125!4.75e-34!9;UBERON:0000033!4.18e-32!123;UBERON:0003056!4.34e-32!61;UBERON:0000924!1.89e-31!173;UBERON:0006601!1.89e-31!173;UBERON:0004121!2.01e-30!169;UBERON:0000153!2.60e-30!129;UBERON:0007811!2.60e-30!129;UBERON:0001950!7.56e-30!20;UBERON:0002619!4.93e-27!22;UBERON:0002420!1.42e-25!9;UBERON:0007245!1.42e-25!9;UBERON:0010009!1.42e-25!9;UBERON:0010011!1.42e-25!9;UBERON:0000454!1.42e-25!9;UBERON:0009663!8.39e-25!7;UBERON:0003076!1.07e-24!15;UBERON:0003057!1.07e-24!15;UBERON:0000956!1.27e-23!25;UBERON:0000203!1.27e-23!25;UBERON:0002298!2.63e-21!8;UBERON:0000025!4.08e-21!194;UBERON:0000369!1.79e-20!4;UBERON:0002435!1.79e-20!4;UBERON:0000204!1.79e-20!4;UBERON:0010082!1.79e-20!4;UBERON:0004733!7.07e-19!12;UBERON:0002028!7.07e-19!12;UBERON:0007277!7.07e-19!12;UBERON:0004732!2.37e-17!13;UBERON:0005383!4.19e-16!3;UBERON:0005382!4.19e-16!3;UBERON:0001872!9.74e-16!5;UBERON:0004111!1.37e-15!241;UBERON:0000988!2.21e-15!3;UBERON:0006331!2.55e-15!3;UBERON:0000064!6.60e-14!219;UBERON:0000483!1.96e-13!309;UBERON:0000119!3.13e-13!312;UBERON:0002680!3.42e-13!9;UBERON:0001895!3.42e-13!9;UBERON:0010092!3.42e-13!9;UBERON:0000477!5.12e-13!286;UBERON:0000200!5.34e-13!6;UBERON:0001873!2.57e-11!2;UBERON:0010122!2.57e-11!2;UBERON:0002148!3.46e-11!2;UBERON:0009662!3.46e-11!2;UBERON:0001871!1.63e-09!7;UBERON:0000475!2.64e-09!365;UBERON:0002021!3.51e-09!5;UBERON:0002240!1.44e-07!3;UBERON:0001896!1.69e-07!3;UBERON:0005290!1.69e-07!3;UBERON:0010096!1.69e-07!3;UBERON:0002771!2.11e-07!3;UBERON:0003978!2.89e-07!3;UBERON:0009751!2.89e-07!3;UBERON:0000946!2.89e-07!3;UBERON:0002523!2.89e-07!3;UBERON:0005983!2.89e-07!3;UBERON:0002165!2.89e-07!3;UBERON:0002062!2.89e-07!3;UBERON:0007280!2.89e-07!3;UBERON:0000481!5.49e-07!347;UBERON:0000062!7.78e-07!511 | ||
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|short_description=p6@SV2C | |short_description=p6@SV2C | ||
}} | }} |
Latest revision as of 17:45, 18 September 2015
Short description: | p6@SV2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SV2C_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 94bp_to_ENST00000502798_5end |
EntrezGene: | SV2C |
HGNC: | 30670 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data