FFCP PHASE1:Hg19::chr17:27505302..27505322,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:27505302..27505322,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_at_chr17:27505302..27505322,- | |description=CAGE_peak_at_chr17:27505302..27505322,- | ||
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|ontology_enrichment_celltype=CL:0000181!6.21e-08!12;CL:0000417!6.21e-08!12;CL:0000668!6.21e-08!12;CL:0000414!6.21e-08!12;CL:0000412!6.21e-08!12;CL:0000182!6.21e-08!12 | |ontology_enrichment_celltype=CL:0000181!6.21e-08!12;CL:0000417!6.21e-08!12;CL:0000668!6.21e-08!12;CL:0000414!6.21e-08!12;CL:0000412!6.21e-08!12;CL:0000182!6.21e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;7.99e-30;12 | |ontology_enrichment_celltype_v019=CL:0000182;7.99e-30;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.24e-30,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.08e-32;11!UBERON:0009497;3.07e-27;13!UBERON:0006242;3.81e-11;1!UBERON:0003104;6.13e-11;31!UBERON:0001041;2.85e-08;30!UBERON:0006595;7.52e-08;86 | |ontology_enrichment_development_v019=UBERON:0004161;3.08e-32;11!UBERON:0009497;3.07e-27;13!UBERON:0006242;3.81e-11;1!UBERON:0003104;6.13e-11;31!UBERON:0001041;2.85e-08;30!UBERON:0006595;7.52e-08;86 | ||
|ontology_enrichment_disease=DOID:305!6.49e-09!106;DOID:0050687!1.49e-07!143 | |ontology_enrichment_disease=DOID:305!6.49e-09!106;DOID:0050687!1.49e-07!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002423;1.10e-38;25!UBERON:0002107;4.15e-33;19!UBERON:0006925;4.15e-33;19!UBERON:0000160;2.03e-19;17!UBERON:0002365;3.12e-19;31!UBERON:0002330;3.12e-19;31!UBERON:0002108;1.66e-18;4!UBERON:0002368;5.70e-17;33!UBERON:0005409;4.01e-15;22!UBERON:0002114;5.05e-14;2!UBERON:0000949;1.91e-12;43!UBERON:0004913;3.81e-11;1!UBERON:0003703;3.81e-11;1!UBERON:0001174;3.81e-11;1!UBERON:0004914;3.81e-11;1!UBERON:0001155;1.77e-10;9!UBERON:0001007;1.93e-10;81!UBERON:0004921;1.67e-09;33!UBERON:0000059;1.14e-08;11!UBERON:0005172;1.52e-08;52!UBERON:0005173;1.52e-08;52!UBERON:0002417;6.91e-08;58!UBERON:0000916;6.91e-08;58!UBERON:0002530;8.95e-08;57 | |ontology_enrichment_uberon_v019=UBERON:0002423;1.10e-38;25!UBERON:0002107;4.15e-33;19!UBERON:0006925;4.15e-33;19!UBERON:0000160;2.03e-19;17!UBERON:0002365;3.12e-19;31!UBERON:0002330;3.12e-19;31!UBERON:0002108;1.66e-18;4!UBERON:0002368;5.70e-17;33!UBERON:0005409;4.01e-15;22!UBERON:0002114;5.05e-14;2!UBERON:0000949;1.91e-12;43!UBERON:0004913;3.81e-11;1!UBERON:0003703;3.81e-11;1!UBERON:0001174;3.81e-11;1!UBERON:0004914;3.81e-11;1!UBERON:0001155;1.77e-10;9!UBERON:0001007;1.93e-10;81!UBERON:0004921;1.67e-09;33!UBERON:0000059;1.14e-08;11!UBERON:0005172;1.52e-08;52!UBERON:0005173;1.52e-08;52!UBERON:0002417;6.91e-08;58!UBERON:0000916;6.91e-08;58!UBERON:0002530;8.95e-08;57 | ||
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|short_description=p@chr17:27505302..27505322,- | |short_description=p@chr17:27505302..27505322,- | ||
}} | }} |
Latest revision as of 15:08, 25 July 2015
Short description: | p@chr17:27505302..27505322, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:27505302..27505322, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.24e-30 | 12 |