FFCP PHASE1:Hg19::chr21:42792612..42792626,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr21:42792612..42792626,+
|short_description=p13@MX1
|description=CAGE_peak_13_at_MX1_5end
|association_with_transcript=92bp_to_NM_001144925,uc002yzh.2_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4599 | |EntrezGene=4599 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7532 | |HGNC=7532 | ||
|TSSclassifier=strong | |||
|UniProt=B3KU10,P20591 | |UniProt=B3KU10,P20591 | ||
|association_with_transcript=92bp_to_NM_001144925,uc002yzh.2_5end | |||
|cluster_id=chr21:42792612..42792626,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_13_at_MX1_5end | |||
|id=chr21:42792612..42792626,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.33e-22!45;CL:0002057!1.51e-22!42;CL:0002194!1.90e-15!63;CL:0000576!1.90e-15!63;CL:0000040!1.90e-15!63;CL:0000559!1.90e-15!63;CL:0002009!8.74e-15!65;CL:0000766!2.47e-14!76;CL:0000839!2.70e-13!70;CL:0000557!5.05e-13!71;CL:0000763!1.91e-08!112;CL:0000049!1.91e-08!112;CL:0002087!6.27e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.66e-47;33!CL:0002057;5.66e-47;33!CL:0000473;1.94e-28;39!CL:0000234;1.94e-28;39!CL:0000576;4.09e-20;48!CL:0002591;5.71e-13;1!CL:0000766;2.58e-12;69!CL:0002087;6.90e-09;104!CL:0000763;9.83e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.24e-38,42;CL:0002057,1.24e-38,42;CL:0000473,1.26e-33,48;CL:0000234,1.26e-33,48;CL:0002194,1.30e-26,59;CL:0000576,1.30e-26,59;CL:0000040,1.30e-26,59;CL:0000559,1.30e-26,59;CL:0002009,1.05e-25,61;CL:0000839,1.13e-23,66;CL:0000557,2.64e-23,67;CL:0000766,1.32e-21,72;CL:0000763,5.94e-14,108;CL:0000049,5.94e-14,108;CL:0002087,5.17e-13,115;CL:0002591,6.06e-13,1;CL:0002031,2.08e-12,120;CL:0000738,9.10e-11,136;CL:0002032,7.56e-09,161;CL:0000837,7.56e-09,161;CL:0000037,2.07e-08,168;CL:0000988,6.71e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.39e-23;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.95e-11!102;UBERON:0003061!4.95e-11!102;UBERON:0002371!6.89e-11!80;UBERON:0001474!1.07e-10!86;UBERON:0002193!2.42e-10!112;UBERON:0004765!5.20e-10!101;UBERON:0001434!5.20e-10!101;UBERON:0002405!8.08e-09!115;UBERON:0002204!5.08e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;4.04e-07;2!UBERON:0002012;4.04e-07;2!UBERON:0008886;4.04e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.22e-21,98;UBERON:0003061,2.22e-21,98;UBERON:0002371,2.10e-20,76;UBERON:0002193,2.96e-19,108;UBERON:0001474,8.11e-19,82;UBERON:0004765,5.01e-17,90;UBERON:0002405,1.97e-16,93;UBERON:0001434,3.49e-15,100;UBERON:0003081,5.31e-11,203;UBERON:0002204,4.38e-10,167;UBERON:0000078,4.17e-07,2;UBERON:0007497,4.17e-07,2;UBERON:0003643,4.17e-07,2;UBERON:0003504,4.17e-07,2;UBERON:0003469,4.17e-07,2;UBERON:0003496,4.17e-07,2;UBERON:0002012,4.17e-07,2;UBERON:0008886,4.17e-07,2;UBERON:0007303,4.17e-07,2;UBERON:0002061,4.17e-07,2;UBERON:0005432,4.17e-07,2;UBERON:0004363,4.17e-07,2 | |||
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| ||
|short_description=p13@MX1 | |||
}} | }} |
Latest revision as of 13:07, 18 September 2015
Short description: | p13@MX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_MX1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 92bp_to_NM_001144925, uc002yzh.2_5end |
EntrezGene: | MX1 |
HGNC: | 7532 |
UniProt: | B3KU10P20591 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.24e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.24e-38 | 42 |
defensive cell | 1.26e-33 | 48 |
phagocyte | 1.26e-33 | 48 |
monopoietic cell | 1.30e-26 | 59 |
monocyte | 1.30e-26 | 59 |
monoblast | 1.30e-26 | 59 |
promonocyte | 1.30e-26 | 59 |
macrophage dendritic cell progenitor | 1.05e-25 | 61 |
myeloid lineage restricted progenitor cell | 1.13e-23 | 66 |
granulocyte monocyte progenitor cell | 2.64e-23 | 67 |
myeloid leukocyte | 1.32e-21 | 72 |
myeloid cell | 5.94e-14 | 108 |
common myeloid progenitor | 5.94e-14 | 108 |
nongranular leukocyte | 5.17e-13 | 115 |
smooth muscle cell of the pulmonary artery | 6.06e-13 | 1 |
hematopoietic lineage restricted progenitor cell | 2.08e-12 | 120 |
leukocyte | 9.10e-11 | 136 |
hematopoietic oligopotent progenitor cell | 7.56e-09 | 161 |
hematopoietic multipotent progenitor cell | 7.56e-09 | 161 |
hematopoietic stem cell | 2.07e-08 | 168 |
hematopoietic cell | 6.71e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.22e-21 | 98 |
blood island | 2.22e-21 | 98 |
bone marrow | 2.10e-20 | 76 |
hemolymphoid system | 2.96e-19 | 108 |
bone element | 8.11e-19 | 82 |
skeletal element | 5.01e-17 | 90 |
immune system | 1.97e-16 | 93 |
skeletal system | 3.49e-15 | 100 |
lateral plate mesoderm | 5.31e-11 | 203 |
musculoskeletal system | 4.38e-10 | 167 |
mixed ectoderm/mesoderm/endoderm-derived structure | 4.17e-07 | 2 |
developing epithelial placode | 4.17e-07 | 2 |
respiratory system arterial blood vessel | 4.17e-07 | 2 |
respiratory system blood vessel | 4.17e-07 | 2 |
respiratory system artery | 4.17e-07 | 2 |
head blood vessel | 4.17e-07 | 2 |
pulmonary artery | 4.17e-07 | 2 |
pulmonary vascular system | 4.17e-07 | 2 |
pharyngeal vasculature | 4.17e-07 | 2 |
truncus arteriosus | 4.17e-07 | 2 |
aortic sac | 4.17e-07 | 2 |
pharyngeal arch artery | 4.17e-07 | 2 |