FFCP PHASE1:Hg19::chr2:20551987..20552001,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23369 | |EntrezGene=23369 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14958 | |HGNC=14958 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z366 | |UniProt=F2Z366 | ||
|association_with_transcript=0bp_to_ENST00000432105_5end | |association_with_transcript=0bp_to_ENST00000432105_5end | ||
|cluster_id=chr2:20551987..20552001,- | |||
|coexpression_cluster_id=C87 | |coexpression_cluster_id=C87 | ||
|description=CAGE_peak_8_at_PUM2_5end | |description=CAGE_peak_8_at_PUM2_5end | ||
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|ontology_enrichment_celltype=CL:0002319!8.43e-07!25 | |ontology_enrichment_celltype=CL:0002319!8.43e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.52e-09;25 | |ontology_enrichment_celltype_v019=CL:0002319;1.52e-09;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.16e-09,25;CL:0000047,4.57e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.29e-11;3 | |ontology_enrichment_development_v019=UBERON:0003056;2.29e-11;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.30e-13!94;UBERON:0001016!2.30e-13!94;UBERON:0005743!1.63e-10!86;UBERON:0003056!3.72e-10!61;UBERON:0002346!5.22e-10!90;UBERON:0001017!7.46e-09!82;UBERON:0003075!1.14e-08!86;UBERON:0007284!1.14e-08!86;UBERON:0002780!1.49e-08!41;UBERON:0001890!1.49e-08!41;UBERON:0006240!1.49e-08!41;UBERON:0001869!1.49e-08!32;UBERON:0000956!2.18e-08!25;UBERON:0000203!2.18e-08!25;UBERON:0000025!2.31e-08!194;UBERON:0003080!3.22e-08!42;UBERON:0001893!8.81e-08!34;UBERON:0002791!2.60e-07!33;UBERON:0004111!3.24e-07!241;UBERON:0002020!5.67e-07!34;UBERON:0003528!5.67e-07!34;UBERON:0000924!7.83e-07!173;UBERON:0006601!7.83e-07!173 | |ontology_enrichment_uberon=UBERON:0000073!2.30e-13!94;UBERON:0001016!2.30e-13!94;UBERON:0005743!1.63e-10!86;UBERON:0003056!3.72e-10!61;UBERON:0002346!5.22e-10!90;UBERON:0001017!7.46e-09!82;UBERON:0003075!1.14e-08!86;UBERON:0007284!1.14e-08!86;UBERON:0002780!1.49e-08!41;UBERON:0001890!1.49e-08!41;UBERON:0006240!1.49e-08!41;UBERON:0001869!1.49e-08!32;UBERON:0000956!2.18e-08!25;UBERON:0000203!2.18e-08!25;UBERON:0000025!2.31e-08!194;UBERON:0003080!3.22e-08!42;UBERON:0001893!8.81e-08!34;UBERON:0002791!2.60e-07!33;UBERON:0004111!3.24e-07!241;UBERON:0002020!5.67e-07!34;UBERON:0003528!5.67e-07!34;UBERON:0000924!7.83e-07!173;UBERON:0006601!7.83e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.72e-16;2!UBERON:0002757;1.72e-16;2!UBERON:0010134;1.72e-16;2!UBERON:0005408;1.72e-16;2!UBERON:0001899;1.72e-16;2!UBERON:0000966;2.67e-14;5!UBERON:0005388;2.67e-14;5!UBERON:0001802;2.67e-14;5!UBERON:0000970;2.96e-09;20!UBERON:0002104;8.35e-09;21!UBERON:0003296;1.09e-08;4!UBERON:0010133;1.09e-08;4!UBERON:0002784;1.09e-08;4!UBERON:0000020;5.08e-08;23!UBERON:0001032;1.12e-07;24!UBERON:0004456;1.12e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0001905;1.72e-16;2!UBERON:0002757;1.72e-16;2!UBERON:0010134;1.72e-16;2!UBERON:0005408;1.72e-16;2!UBERON:0001899;1.72e-16;2!UBERON:0000966;2.67e-14;5!UBERON:0005388;2.67e-14;5!UBERON:0001802;2.67e-14;5!UBERON:0000970;2.96e-09;20!UBERON:0002104;8.35e-09;21!UBERON:0003296;1.09e-08;4!UBERON:0010133;1.09e-08;4!UBERON:0002784;1.09e-08;4!UBERON:0000020;5.08e-08;23!UBERON:0001032;1.12e-07;24!UBERON:0004456;1.12e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.73e-16,2;UBERON:0002757,1.73e-16,2;UBERON:0010134,1.73e-16,2;UBERON:0005408,1.73e-16,2;UBERON:0001899,1.73e-16,2;UBERON:0000966,4.37e-12,6;UBERON:0005388,4.37e-12,6;UBERON:0001802,4.37e-12,6;UBERON:0003056,1.70e-10,61;UBERON:0001016,1.23e-09,89;UBERON:0001017,3.90e-09,81;UBERON:0000970,7.95e-09,21;UBERON:0002104,7.95e-09,21;UBERON:0003296,1.09e-08,4;UBERON:0010133,1.09e-08,4;UBERON:0002784,1.09e-08,4;UBERON:0000020,1.07e-07,24;UBERON:0001032,1.07e-07,24;UBERON:0004456,1.07e-07,24;UBERON:0003075,1.99e-07,82;UBERON:0007284,1.99e-07,82;UBERON:0002346,5.19e-07,86;UBERON:0004121,6.89e-07,171;UBERON:0000924,6.89e-07,171;UBERON:0006601,6.89e-07,171 | |||
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| ||
|short_description=p8@PUM2 | |short_description=p8@PUM2 | ||
}} | }} |
Latest revision as of 16:42, 19 September 2015
Short description: | p8@PUM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PUM2_5end |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | 0bp_to_ENST00000432105_5end |
EntrezGene: | PUM2 |
HGNC: | 14958 |
UniProt: | F2Z366 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.16e-09 | 25 |
neuronal stem cell | 4.57e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.73e-16 | 2 |
regional part of epithalamus | 1.73e-16 | 2 |
secretory circumventricular organ | 1.73e-16 | 2 |
circumventricular organ | 1.73e-16 | 2 |
epithalamus | 1.73e-16 | 2 |
retina | 4.37e-12 | 6 |
photoreceptor array | 4.37e-12 | 6 |
posterior segment of eyeball | 4.37e-12 | 6 |
pre-chordal neural plate | 1.70e-10 | 61 |
nervous system | 1.23e-09 | 89 |
central nervous system | 3.90e-09 | 81 |
eye | 7.95e-09 | 21 |
visual system | 7.95e-09 | 21 |
gland of diencephalon | 1.09e-08 | 4 |
neuroendocrine gland | 1.09e-08 | 4 |
regional part of diencephalon | 1.09e-08 | 4 |
sense organ | 1.07e-07 | 24 |
sensory system | 1.07e-07 | 24 |
entire sense organ system | 1.07e-07 | 24 |
neural plate | 1.99e-07 | 82 |
presumptive neural plate | 1.99e-07 | 82 |
neurectoderm | 5.19e-07 | 86 |
ectoderm-derived structure | 6.89e-07 | 171 |
ectoderm | 6.89e-07 | 171 |
presumptive ectoderm | 6.89e-07 | 171 |