FFCP PHASE1:Hg19::chr20:34205592..34205613,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6676 | |EntrezGene=6676 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11214 | |HGNC=11214 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000498203_5end | |association_with_transcript=0bp_to_ENST00000498203_5end | ||
|cluster_id=chr20:34205592..34205613,+ | |||
|description=CAGE_peak_3_at_SPAG4_5end | |description=CAGE_peak_3_at_SPAG4_5end | ||
|id=chr20:34205592..34205613,+ | |id=chr20:34205592..34205613,+ | ||
|ontology_enrichment_celltype=CL:0000359!1.09e-10!32;CL:0000192!2.70e-08!42;CL:0000514!2.70e-08!42 | |ontology_enrichment_celltype=CL:0000359!1.09e-10!32;CL:0000192!2.70e-08!42;CL:0000514!2.70e-08!42 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.10e-16;32!CL:0000192;1.55e-10;43!CL:0002539;1.12e-07;10!CL:0000187;3.29e-07;55 | |ontology_enrichment_celltype_v019=CL:0000359;6.10e-16;32!CL:0000192;1.55e-10;43!CL:0002539;1.12e-07;10!CL:0000187;3.29e-07;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.60e-17,32;CL:0000192,6.03e-13,43;CL:0000514,6.03e-13,43;CL:0000187,1.87e-10,55;CL:0000680,1.16e-09,58;CL:0000056,1.16e-09,58;CL:0000355,1.16e-09,58;CL:0000393,5.92e-09,61;CL:0000211,5.92e-09,61;CL:0002539,9.37e-08,10;CL:0000222,2.20e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.55e-10;43!UBERON:0004161;6.98e-10;11!UBERON:0009497;3.55e-08;13 | |ontology_enrichment_development_v019=CL:0000514;1.55e-10;43!UBERON:0004161;6.98e-10;11!UBERON:0009497;3.55e-08;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!2.53e-14!42;UBERON:0003509!2.53e-14!42;UBERON:0004572!2.53e-14!42;UBERON:0000055!9.55e-12!69;UBERON:0002049!3.06e-11!79;UBERON:0007798!3.06e-11!79;UBERON:0001981!1.05e-10!60;UBERON:0007500!1.05e-10!60;UBERON:0004537!1.05e-10!60;UBERON:0006965!1.05e-10!60;UBERON:0004573!1.49e-10!33;UBERON:0004571!1.49e-10!33;UBERON:0000490!5.49e-10!138;UBERON:0003914!7.25e-10!118;UBERON:0004872!1.59e-08!84;UBERON:0004535!5.81e-07!110 | |ontology_enrichment_uberon=UBERON:0001637!2.53e-14!42;UBERON:0003509!2.53e-14!42;UBERON:0004572!2.53e-14!42;UBERON:0000055!9.55e-12!69;UBERON:0002049!3.06e-11!79;UBERON:0007798!3.06e-11!79;UBERON:0001981!1.05e-10!60;UBERON:0007500!1.05e-10!60;UBERON:0004537!1.05e-10!60;UBERON:0006965!1.05e-10!60;UBERON:0004573!1.49e-10!33;UBERON:0004571!1.49e-10!33;UBERON:0000490!5.49e-10!138;UBERON:0003914!7.25e-10!118;UBERON:0004872!1.59e-08!84;UBERON:0004535!5.81e-07!110 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.82e-14;42!UBERON:0003509;6.82e-14;42!UBERON:0004572;6.82e-14;42!UBERON:0004573;2.99e-13;33!UBERON:0004571;2.99e-13;33!UBERON:0007500;5.11e-09;56!UBERON:0001981;5.11e-09;56!UBERON:0004537;5.11e-09;56!UBERON:0002107;8.23e-09;19!UBERON:0006925;8.23e-09;19!UBERON:0000055;3.80e-08;65!UBERON:0004237;1.12e-07;10!UBERON:0004695;1.12e-07;10!UBERON:0002111;1.12e-07;10!UBERON:0004178;1.12e-07;10!UBERON:0002423;1.22e-07;25!UBERON:0002049;2.42e-07;75!UBERON:0007798;2.42e-07;75!UBERON:0000947;6.34e-07;21!UBERON:0010191;6.34e-07;21 | |ontology_enrichment_uberon_v019=UBERON:0001637;6.82e-14;42!UBERON:0003509;6.82e-14;42!UBERON:0004572;6.82e-14;42!UBERON:0004573;2.99e-13;33!UBERON:0004571;2.99e-13;33!UBERON:0007500;5.11e-09;56!UBERON:0001981;5.11e-09;56!UBERON:0004537;5.11e-09;56!UBERON:0002107;8.23e-09;19!UBERON:0006925;8.23e-09;19!UBERON:0000055;3.80e-08;65!UBERON:0004237;1.12e-07;10!UBERON:0004695;1.12e-07;10!UBERON:0002111;1.12e-07;10!UBERON:0004178;1.12e-07;10!UBERON:0002423;1.22e-07;25!UBERON:0002049;2.42e-07;75!UBERON:0007798;2.42e-07;75!UBERON:0000947;6.34e-07;21!UBERON:0010191;6.34e-07;21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.42e-20,42;UBERON:0003509,1.42e-20,42;UBERON:0004572,1.42e-20,42;UBERON:0003914,4.32e-19,117;UBERON:0004573,5.07e-16,33;UBERON:0004571,5.07e-16,33;UBERON:0007500,9.71e-16,59;UBERON:0001981,9.71e-16,59;UBERON:0004537,9.71e-16,59;UBERON:0006965,9.71e-16,59;UBERON:0000055,1.92e-15,68;UBERON:0002049,6.32e-14,78;UBERON:0007798,6.32e-14,78;UBERON:0000490,7.32e-14,148;UBERON:0004872,1.09e-12,83;UBERON:0005256,7.04e-12,122;UBERON:0003104,8.77e-11,160;UBERON:0009142,8.77e-11,160;UBERON:0004535,1.50e-10,109;UBERON:0001009,4.56e-10,112;UBERON:0001134,9.83e-09,62;UBERON:0002036,9.83e-09,62;UBERON:0003082,9.83e-09,62;UBERON:0002107,1.00e-08,19;UBERON:0006925,1.00e-08,19;UBERON:0008836,1.00e-08,19;UBERON:0002385,2.58e-08,64;UBERON:0001015,2.58e-08,64;UBERON:0000383,2.58e-08,64;UBERON:0000025,2.59e-08,192;UBERON:0004237,9.37e-08,10;UBERON:0004695,9.37e-08,10;UBERON:0002111,9.37e-08,10;UBERON:0004178,9.37e-08,10;UBERON:0007499,1.38e-07,25;UBERON:0009497,1.48e-07,25;UBERON:0000015,1.48e-07,25;UBERON:0002423,1.48e-07,25;UBERON:0006235,1.48e-07,25;UBERON:0004161,1.48e-07,25;UBERON:0002100,1.66e-07,199;UBERON:0008835,2.78e-07,22;UBERON:0003894,2.78e-07,22;UBERON:0009856,3.25e-07,26;UBERON:0002329,4.77e-07,71;UBERON:0003059,4.77e-07,71;UBERON:0007282,4.77e-07,71;UBERON:0004290,4.77e-07,71;UBERON:0009618,4.77e-07,71;UBERON:0000947,5.02e-07,21;UBERON:0010191,5.02e-07,21;UBERON:0003077,6.89e-07,72;UBERON:0007285,6.89e-07,72;UBERON:0009854,6.92e-07,23;UBERON:0004111,7.66e-07,240;UBERON:0007503,8.17e-07,78;UBERON:0007524,9.84e-07,73 | |||
|phase1_expression=0,0.428201047781966,0.422863212287913,0,0,2.61701557230111,0,0.631719873426831,0,1.47440361900905,0.697801167972428,0,0,0.123766352960047,0.662794751455832,1.34465029290355,0,0,0,0,0.204000691244253,0,0,0,0,0.61130724598361,0.328402357799783,0.787107813136792,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.64885321586358,0.361439152384566,0.50133791063589,0.289693037921647,0,6.32625331393427,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0.741568885568859,0,0,0,0,0,0,0.596287222100115,0,1.38856200643038,0,1.25849830862972,0.825354125820202,0.208994966536811,0.258416759169329,0,1.67360306382335,0,1.52054421143703,0,0.367663080345869,1.62028389576352,0.0892997282840798,0,0,1.53316637465883,0,0.366403487860815,0,0,0.872188104285069,2.48485975847659,0.25326102332916,1.45650098894541,0,0,0,1.06748995729705,0.74000264525148,0,0,0,0.908144565869588,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0,0.206651562351531,0,0,0,1.43723628363248,0,0,0,0,0,0,1.24775401476023,0.358779271377724,0,1.27159140695737,0,0.309157587715317,0.257640540045629,0.18611685633159,0.168776332241266,1.16924406193438,0.757301322732344,0.552299391853796,0,0,0.302256294682921,1.18692414617341,0.193260853163297,0.272746120590835,0,0.365921118388786,0.265059536642971,3.137236457477,1.96956004529204,3.78481276313443,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.441175890929576,0.653638332277218,0.474541238222193,0.539325232640658,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,6.34800898104545,0.109750285408626,0,0,0,0,0,1.44331342025273,1.39116485970092,0.234817388471643,0.288732895522148,0.462985512576611,0,0,0,0,0,0,0,0,0,0.53735113621709,0.290633938513962,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0.308482478109971,0,0,0,0,0.2933531432838,0,0,0,0,0,0.257207374262142,0,0,4.71827379071887,1.08524321078289,1.64648067356154,0.325736184293735,5.33087923113819,0,0.602878754119172,0,0,0,0,0,0.239624855491583,0,0,0.579125226670317,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0.623912584592421,0,0,0.35142424497814,1.80567659836631,0,0,0,0.553107505625109,0,2.74121620447837,1.71571711905428,0,0,0,0,0,0,0.744323423456331,0,0,0.640695746278505,0,0,0,0,0.532685175939381,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0.131124414959424,0,1.5403067420883,0,0,0.633309773357254,0,0,0,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0.769350375349168,0,0,0,0,0,0,0,3.21367859688319,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0.991709492165869,0.576570202095319,0.765676274967505,1.0115778085555,6.97268323945929,1.25924938732256,0.6970372701606,6.16067160352178,1.59691809095107,1.73986598415015,4.44778125849408,1.86062352764589,0,0,0.190630193923825,0,0,0.95460974377781,5.49464048139461,0,0,0,1.2130948894399,1.58510321173008,0.842516912477962,0,0.487426979262569,0,0.545999645631943,0.424216295861138,0,3.85955740482287,7.96126770289464,3.06915619677634,0,0,2.23201414658974,0.92947049429925,2.25356482025793,0,0.589494246078727,2.49669736036875,1.06428319221179,0.211107635297664,0,0,0,0.192444225451024,0,0,0.282431402330337,1.72202149068492,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79129200023881,0,0,1.43246690842614,0,2.45728561679386,0,0.140669416410513,0.667852230137435,0,0,0.19924798825107,0.276283915531148,1.25966373927138,0,1.10776324914963,2.79935628895627,0.269605053441981,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0.361789315876224,0,0,0,0.219385397153973,0,0,0,0.455768223388005,0.23056390438806,0.538545866458633,2.93347904189422,2.23300811812344,0,1.5991043280559,0,0,0,0.225595660617181,0.19606253431774,0,0,0.317873157960757,0.632994193584081,0.979396848954886,0,0,0,0.0884575645033392,0.611030144933625,0,0.741383633679017,1.04421949505455,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0.313932918407225,0,0,0.138674673013139,0,0.293977192243133,0.69647365264322,0.17472666824203,0.343972064943233,0.0967563312890851,0.0730893170861856,0,0,0.264768380074501,3.84167259326905,0.274083849293502,0.794858446811959,0,0.195551382734803,1.36269994427607,0,0,0.288180834308212,0.114536596165916,0.514784993585894,0,0.49701014226173,0,0,0,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,3.96329871896644,1.16495949527454,4.56942457381897,3.37905019362782,6.20112603458501,0,0.0846733320657845,0,0.272406812223151,0.803765742325096,0.825236619583403,0.83088067605837,0,0,0.0607495566580247,0,0.0788057072991982,0.209818352539992,0.211200673038813,0.35857467866569,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0,3.74853647927928,2.71949019648302,0,1.3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| ||
|short_description=p3@SPAG4 | |short_description=p3@SPAG4 | ||
}} | }} |
Latest revision as of 20:34, 15 September 2015
Short description: | p3@SPAG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPAG4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000498203_5end |
EntrezGene: | SPAG4 |
HGNC: | 11214 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.60e-17 | 32 |
smooth muscle cell | 6.03e-13 | 43 |
smooth muscle myoblast | 6.03e-13 | 43 |
muscle cell | 1.87e-10 | 55 |
muscle precursor cell | 1.16e-09 | 58 |
myoblast | 1.16e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.16e-09 | 58 |
electrically responsive cell | 5.92e-09 | 61 |
electrically active cell | 5.92e-09 | 61 |
aortic smooth muscle cell | 9.37e-08 | 10 |
mesodermal cell | 2.20e-07 | 121 |