FFCP PHASE1:Hg19::chr20:36776392..36776431,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:36776392..36776431,- | |||
|coexpression_cluster_id=C454 | |coexpression_cluster_id=C454 | ||
|description=CAGE_peak_at_chr20:36776392..36776431,- | |description=CAGE_peak_at_chr20:36776392..36776431,- | ||
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|ontology_enrichment_celltype=CL:0000222!1.56e-15!119;CL:0000192!4.99e-15!42;CL:0000514!4.99e-15!42;CL:0000359!2.71e-11!32;CL:0000183!6.08e-11!59;CL:0000187!9.97e-11!54;CL:0000680!1.30e-10!57;CL:0000056!1.30e-10!57;CL:0000355!1.30e-10!57;CL:0000115!5.01e-10!35;CL:0002139!6.40e-10!24;CL:0000220!3.16e-09!246;CL:0002078!5.94e-09!44;CL:0002321!6.54e-09!248;CL:0000393!2.22e-08!60;CL:0000211!2.22e-08!60;CL:0000071!2.35e-08!18;CL:0002546!2.35e-08!18 | |ontology_enrichment_celltype=CL:0000222!1.56e-15!119;CL:0000192!4.99e-15!42;CL:0000514!4.99e-15!42;CL:0000359!2.71e-11!32;CL:0000183!6.08e-11!59;CL:0000187!9.97e-11!54;CL:0000680!1.30e-10!57;CL:0000056!1.30e-10!57;CL:0000355!1.30e-10!57;CL:0000115!5.01e-10!35;CL:0002139!6.40e-10!24;CL:0000220!3.16e-09!246;CL:0002078!5.94e-09!44;CL:0002321!6.54e-09!248;CL:0000393!2.22e-08!60;CL:0000211!2.22e-08!60;CL:0000071!2.35e-08!18;CL:0002546!2.35e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.87e-11;32!CL:0000349;5.18e-11;19!CL:0000192;5.48e-10;43!CL:0002541;3.48e-08;3!CL:0002539;5.11e-07;10 | |ontology_enrichment_celltype_v019=CL:0000359;2.87e-11;32!CL:0000349;5.18e-11;19!CL:0000192;5.48e-10;43!CL:0002541;3.48e-08;3!CL:0002539;5.11e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.38e-11,43;CL:0000514,1.38e-11,43;CL:0000359,1.41e-11,32;CL:0000349,4.21e-11,19;CL:0000222,1.74e-10,121;CL:0002541,3.59e-08,3;CL:0000187,4.31e-08,55;CL:0000680,1.87e-07,58;CL:0000056,1.87e-07,58;CL:0000355,1.87e-07,58;CL:0000115,2.15e-07,36;CL:0002539,4.21e-07,10;CL:0000393,6.92e-07,61;CL:0000211,6.92e-07,61;CL:0002622,8.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;5.48e-10;43 | |ontology_enrichment_development_v019=CL:0000514;5.48e-10;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr20:36776392..36776431,- | |short_description=p@chr20:36776392..36776431,- | ||
}} | }} |
Latest revision as of 13:51, 28 July 2015
Short description: | p@chr20:36776392..36776431, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:36776392..36776431, - |
Coexpression cluster: | C454_Placental_Amniotic_Smooth_Mesenchymal_Lens_Renal_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.38e-11 | 43 |
smooth muscle myoblast | 1.38e-11 | 43 |
vascular associated smooth muscle cell | 1.41e-11 | 32 |
extraembryonic cell | 4.21e-11 | 19 |
mesodermal cell | 1.74e-10 | 121 |
chorionic membrane mesenchymal stem cell | 3.59e-08 | 3 |
muscle cell | 4.31e-08 | 55 |
muscle precursor cell | 1.87e-07 | 58 |
myoblast | 1.87e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.87e-07 | 58 |
endothelial cell | 2.15e-07 | 36 |
aortic smooth muscle cell | 4.21e-07 | 10 |
electrically responsive cell | 6.92e-07 | 61 |
electrically active cell | 6.92e-07 | 61 |
prostate stromal cell | 8.16e-07 | 3 |