FFCP PHASE1:Hg19::chr22:29196511..29196541,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:29196511..29196541,-
|short_description=p1@XBP1
|description=CAGE_peak_1_at_XBP1_5end
|association_with_transcript=0bp_to_ENST00000415306_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7494 | |EntrezGene=7494 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12801 | |HGNC=12801 | ||
|TSSclassifier=strong | |||
|UniProt=F8WDI6 | |UniProt=F8WDI6 | ||
|association_with_transcript=0bp_to_ENST00000415306_5end | |||
|cluster_id=chr22:29196511..29196541,- | |||
|description=CAGE_peak_1_at_XBP1_5end | |||
|id=chr22:29196511..29196541,- | |||
|ontology_enrichment_celltype=CL:0000134!2.52e-15!358;CL:0002320!1.75e-14!365;CL:0000048!1.35e-13!430;CL:0000723!7.24e-13!436;CL:0000034!1.48e-12!444;CL:0002057!2.33e-12!42;CL:0000860!6.44e-10!45;CL:0000219!2.26e-09!390;CL:0000557!9.16e-09!71;CL:0000763!1.81e-08!112;CL:0000049!1.81e-08!112;CL:0000766!7.25e-08!76;CL:0002371!1.36e-07!591;CL:0000988!1.59e-07!182;CL:0000037!2.53e-07!172;CL:0000566!2.53e-07!172;CL:0002009!3.65e-07!65;CL:0000063!7.22e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.42e-14;33!CL:0002057;3.42e-14;33!CL:0000473;3.50e-10;39!CL:0000234;3.50e-10;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000134,1.60e-16,354;CL:0002320,1.23e-15,361;CL:0000048,1.49e-14,427;CL:0000723,8.60e-14,433;CL:0000034,1.83e-13,441;CL:0000860,2.33e-12,42;CL:0002057,2.33e-12,42;CL:0000473,8.62e-11,48;CL:0000234,8.62e-11,48;CL:0000219,2.99e-10,386;CL:0000557,3.40e-10,67;CL:0000763,1.67e-09,108;CL:0000049,1.67e-09,108;CL:0000766,3.97e-09,72;CL:0002009,1.80e-08,61;CL:0000988,2.09e-08,177;CL:0000037,4.74e-08,168;CL:0000839,9.83e-08,66;CL:0002194,1.03e-07,59;CL:0000576,1.03e-07,59;CL:0000040,1.03e-07,59;CL:0000559,1.03e-07,59;CL:0002032,4.21e-07,161;CL:0000837,4.21e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.06e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!6.47e-14!375;UBERON:0002405!1.49e-09!115;UBERON:0002371!8.45e-09!80;UBERON:0001474!8.49e-09!86;UBERON:0002390!2.88e-07!102;UBERON:0003061!2.88e-07!102;UBERON:0000926!8.57e-07!448;UBERON:0004120!8.57e-07!448;UBERON:0006603!8.57e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.97e-15,371;UBERON:0002371,4.01e-10,76;UBERON:0001474,4.66e-10,82;UBERON:0002390,2.99e-08,98;UBERON:0003061,2.99e-08,98;UBERON:0004765,5.84e-08,90;UBERON:0003081,7.07e-08,203;UBERON:0002405,1.33e-07,93;UBERON:0002193,3.57e-07,108;UBERON:0001434,6.10e-07,100 | |||
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| ||
|short_description=p1@XBP1 | |||
}} | }} |
Latest revision as of 14:50, 19 September 2015
Short description: | p1@XBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_XBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000415306_5end |
EntrezGene: | XBP1 |
HGNC: | 12801 |
UniProt: | F8WDI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal cell | 1.60e-16 | 354 |
connective tissue cell | 1.23e-15 | 361 |
multi fate stem cell | 1.49e-14 | 427 |
somatic stem cell | 8.60e-14 | 433 |
stem cell | 1.83e-13 | 441 |
classical monocyte | 2.33e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.33e-12 | 42 |
defensive cell | 8.62e-11 | 48 |
phagocyte | 8.62e-11 | 48 |
motile cell | 2.99e-10 | 386 |
granulocyte monocyte progenitor cell | 3.40e-10 | 67 |
myeloid cell | 1.67e-09 | 108 |
common myeloid progenitor | 1.67e-09 | 108 |
myeloid leukocyte | 3.97e-09 | 72 |
macrophage dendritic cell progenitor | 1.80e-08 | 61 |
hematopoietic cell | 2.09e-08 | 177 |
hematopoietic stem cell | 4.74e-08 | 168 |
myeloid lineage restricted progenitor cell | 9.83e-08 | 66 |
monopoietic cell | 1.03e-07 | 59 |
monocyte | 1.03e-07 | 59 |
monoblast | 1.03e-07 | 59 |
promonocyte | 1.03e-07 | 59 |
hematopoietic oligopotent progenitor cell | 4.21e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.21e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.97e-15 | 371 |
bone marrow | 4.01e-10 | 76 |
bone element | 4.66e-10 | 82 |
hematopoietic system | 2.99e-08 | 98 |
blood island | 2.99e-08 | 98 |
skeletal element | 5.84e-08 | 90 |
lateral plate mesoderm | 7.07e-08 | 203 |
immune system | 1.33e-07 | 93 |
hemolymphoid system | 3.57e-07 | 108 |
skeletal system | 6.10e-07 | 100 |