FFCP PHASE1:Hg19::chr13:74185074..74185088,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:74185074..74185088,+ | |||
|coexpression_cluster_id=C133 | |coexpression_cluster_id=C133 | ||
|description=CAGE_peak_at_chr13:74185074..74185088,+ | |description=CAGE_peak_at_chr13:74185074..74185088,+ | ||
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|ontology_enrichment_celltype=CL:0000223!2.46e-09!59;CL:0002076!6.31e-09!43;CL:0002368!6.25e-07!13 | |ontology_enrichment_celltype=CL:0000223!2.46e-09!59;CL:0002076!6.31e-09!43;CL:0002368!6.25e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000083;1.44e-09;4 | |ontology_enrichment_celltype_v019=CL:0000083;1.44e-09;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000083,1.44e-09,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1749!4.93e-10!14;DOID:3151!2.82e-07!1;DOID:3149!2.82e-07!1 | |ontology_enrichment_disease=DOID:1749!4.93e-10!14;DOID:3151!2.82e-07!1;DOID:3149!2.82e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3151;5.05e-34;1!DOID:3149;5.05e-34;1!DOID:3493;5.48e-18;2!DOID:3451;9.07e-18;2!DOID:4159;9.07e-18;2!DOID:0060122;9.07e-18;2!DOID:4929;9.07e-18;2!DOID:1793;1.44e-09;4!DOID:4362;6.55e-08;5!DOID:170;8.48e-07;6 | |ontology_enrichment_disease_v019=DOID:3151;5.05e-34;1!DOID:3149;5.05e-34;1!DOID:3493;5.48e-18;2!DOID:3451;9.07e-18;2!DOID:4159;9.07e-18;2!DOID:0060122;9.07e-18;2!DOID:4929;9.07e-18;2!DOID:1793;1.44e-09;4!DOID:4362;6.55e-08;5!DOID:170;8.48e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,9.85e-34,1;DOID:3149,9.85e-34,1;DOID:3493,5.48e-18,2;DOID:4929,9.07e-18,2;DOID:3451,1.27e-17,2;DOID:4159,1.27e-17,2;DOID:0060122,1.27e-17,2;DOID:1793,1.44e-09,4;DOID:4362,6.13e-08,5;DOID:170,8.48e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0003127!7.02e-13!2;UBERON:0002372!4.01e-07!1;UBERON:0001961!4.01e-07!1;UBERON:0001744!4.01e-07!1;UBERON:0001735!4.01e-07!1;UBERON:0000161!6.79e-07!35;UBERON:0003112!7.57e-07!1;UBERON:0000032!7.57e-07!1;UBERON:0005253!7.57e-07!1;UBERON:0003128!7.57e-07!1;UBERON:0002241!7.57e-07!1;UBERON:0001703!7.57e-07!1;UBERON:0004761!7.57e-07!1;UBERON:0009617!7.57e-07!1 | |ontology_enrichment_uberon=UBERON:0003127!7.02e-13!2;UBERON:0002372!4.01e-07!1;UBERON:0001961!4.01e-07!1;UBERON:0001744!4.01e-07!1;UBERON:0001735!4.01e-07!1;UBERON:0000161!6.79e-07!35;UBERON:0003112!7.57e-07!1;UBERON:0000032!7.57e-07!1;UBERON:0005253!7.57e-07!1;UBERON:0003128!7.57e-07!1;UBERON:0002241!7.57e-07!1;UBERON:0001703!7.57e-07!1;UBERON:0004761!7.57e-07!1;UBERON:0009617!7.57e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;9.07e-18;2!UBERON:0000014;1.44e-09;4!UBERON:0000002;8.48e-07;6!UBERON:0001560;8.48e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0003127;9.07e-18;2!UBERON:0000014;1.44e-09;4!UBERON:0000002;8.48e-07;6!UBERON:0001560;8.48e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.07e-17,2;UBERON:0000014,1.70e-09,4;UBERON:0000002,8.02e-07,6;UBERON:0001560,8.02e-07,6 | |||
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|short_description=p@chr13:74185074..74185088,+ | |short_description=p@chr13:74185074..74185088,+ | ||
}} | }} |
Latest revision as of 17:02, 24 July 2015
Short description: | p@chr13:74185074..74185088, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:74185074..74185088, + |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 1.44e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.07e-17 | 2 |
zone of skin | 1.70e-09 | 4 |
uterine cervix | 8.02e-07 | 6 |
neck of organ | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 9.85e-34 | 1 |
keratoacanthoma | 9.85e-34 | 1 |
signet ring cell adenocarcinoma | 5.48e-18 | 2 |
tubular adenocarcinoma | 9.07e-18 | 2 |
skin carcinoma | 1.27e-17 | 2 |
skin cancer | 1.27e-17 | 2 |
integumentary system cancer | 1.27e-17 | 2 |
pancreatic cancer | 1.44e-09 | 4 |
cervical cancer | 6.13e-08 | 5 |
endocrine gland cancer | 8.48e-07 | 6 |