FFCP PHASE1:Hg19::chr4:173916869..173916878,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=34bp_to_uc003isx.1_5end | |association_with_transcript=34bp_to_uc003isx.1_5end | ||
|cluster_id=chr4:173916869..173916878,- | |||
|coexpression_cluster_id=C81 | |coexpression_cluster_id=C81 | ||
|description=CAGE_peak_3_at_uc003isx.1_5end | |description=CAGE_peak_3_at_uc003isx.1_5end | ||
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|ontology_enrichment_celltype=CL:0002623!1.94e-17!3;CL:0002336!1.42e-13!1;CL:0002261!1.42e-13!1;CL:0002170!1.42e-13!1;CL:0000622!7.51e-11!5;CL:0000154!3.42e-09!6 | |ontology_enrichment_celltype=CL:0002623!1.94e-17!3;CL:0002336!1.42e-13!1;CL:0002261!1.42e-13!1;CL:0002170!1.42e-13!1;CL:0000622!7.51e-11!5;CL:0000154!3.42e-09!6 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.74e-15;29 | |ontology_enrichment_development_v019=UBERON:0008947;6.74e-15;29 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!1.47e-26!2;UBERON:0002171!3.50e-14!1;UBERON:0006518!3.50e-14!1;UBERON:0008949!3.50e-14!1;UBERON:0000101!3.50e-14!1;UBERON:0002167!3.50e-14!1;UBERON:0002372!2.07e-13!1;UBERON:0001961!2.07e-13!1;UBERON:0001744!2.07e-13!1;UBERON:0001735!2.07e-13!1;UBERON:0001044!3.42e-09!6;UBERON:0003293!3.42e-09!6;UBERON:0003294!3.42e-09!6;UBERON:0010047!3.42e-09!6;UBERON:0000167!3.42e-09!6;UBERON:0003126!2.88e-08!7;UBERON:0001005!2.88e-08!7;UBERON:0001004!6.25e-08!72;UBERON:0000341!1.20e-07!2;UBERON:0000165!2.97e-07!28;UBERON:0000930!2.97e-07!28 | |ontology_enrichment_uberon=UBERON:0003127!1.47e-26!2;UBERON:0002171!3.50e-14!1;UBERON:0006518!3.50e-14!1;UBERON:0008949!3.50e-14!1;UBERON:0000101!3.50e-14!1;UBERON:0002167!3.50e-14!1;UBERON:0002372!2.07e-13!1;UBERON:0001961!2.07e-13!1;UBERON:0001744!2.07e-13!1;UBERON:0001735!2.07e-13!1;UBERON:0001044!3.42e-09!6;UBERON:0003293!3.42e-09!6;UBERON:0003294!3.42e-09!6;UBERON:0010047!3.42e-09!6;UBERON:0000167!3.42e-09!6;UBERON:0003126!2.88e-08!7;UBERON:0001005!2.88e-08!7;UBERON:0001004!6.25e-08!72;UBERON:0000341!1.20e-07!2;UBERON:0000165!2.97e-07!28;UBERON:0000930!2.97e-07!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.55e-98;1!UBERON:0006518;2.55e-98;1!UBERON:0008949;2.55e-98;1!UBERON:0000101;2.55e-98;1!UBERON:0002167;2.55e-98;1!UBERON:0003127;2.74e-50;2!UBERON:0003126;1.65e-15;7!UBERON:0001005;1.65e-15;7!UBERON:0005178;1.65e-10;34!UBERON:0002224;1.65e-10;34!UBERON:0005181;1.59e-09;35!UBERON:0000065;3.70e-09;44!UBERON:0007196;5.55e-08;15!UBERON:0001558;5.55e-08;15!UBERON:0000915;7.96e-07;52 | |ontology_enrichment_uberon_v019=UBERON:0002171;2.55e-98;1!UBERON:0006518;2.55e-98;1!UBERON:0008949;2.55e-98;1!UBERON:0000101;2.55e-98;1!UBERON:0002167;2.55e-98;1!UBERON:0003127;2.74e-50;2!UBERON:0003126;1.65e-15;7!UBERON:0001005;1.65e-15;7!UBERON:0005178;1.65e-10;34!UBERON:0002224;1.65e-10;34!UBERON:0005181;1.59e-09;35!UBERON:0000065;3.70e-09;44!UBERON:0007196;5.55e-08;15!UBERON:0001558;5.55e-08;15!UBERON:0000915;7.96e-07;52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.55e-98,1;UBERON:0006518,2.55e-98,1;UBERON:0008949,2.55e-98,1;UBERON:0000101,2.55e-98,1;UBERON:0002167,2.55e-98,1;UBERON:0003127,2.74e-50,2;UBERON:0003126,1.65e-15,7;UBERON:0001005,1.65e-15,7;UBERON:0005178,6.62e-13,34;UBERON:0002224,6.62e-13,34;UBERON:0005181,1.42e-12,35;UBERON:0008947,1.10e-11,38;UBERON:0003258,1.10e-11,38;UBERON:0000915,6.99e-09,52;UBERON:0000065,1.34e-08,54;UBERON:0007196,5.55e-08,15;UBERON:0001558,5.55e-08,15 | |||
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|short_description=p3@uc003isx.1 | |short_description=p3@uc003isx.1 | ||
}} | }} |
Latest revision as of 03:21, 30 July 2015
Short description: | p3@uc003isx.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_uc003isx.1_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | 34bp_to_uc003isx.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.55e-98 | 1 |
right lung lobe | 2.55e-98 | 1 |
lower lobe of lung | 2.55e-98 | 1 |
lobe of lung | 2.55e-98 | 1 |
right lung | 2.55e-98 | 1 |
open tracheal system trachea | 2.74e-50 | 2 |
trachea | 1.65e-15 | 7 |
respiratory airway | 1.65e-15 | 7 |
thoracic cavity element | 6.62e-13 | 34 |
thoracic cavity | 6.62e-13 | 34 |
thoracic segment organ | 1.42e-12 | 35 |
respiratory primordium | 1.10e-11 | 38 |
endoderm of foregut | 1.10e-11 | 38 |
thoracic segment of trunk | 6.99e-09 | 52 |
respiratory tract | 1.34e-08 | 54 |
tracheobronchial tree | 5.55e-08 | 15 |
lower respiratory tract | 5.55e-08 | 15 |