FFCP PHASE1:Hg19::chr22:41487711..41487798,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:41487711..41487798,+
|short_description=p1@EP300
|description=CAGE_peak_1_at_EP300_5end
|association_with_transcript=0bp_to_ENST00000263253_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2033 | |EntrezGene=2033 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3373 | |HGNC=3373 | ||
|TSSclassifier=strong | |||
|UniProt=Q09472 | |UniProt=Q09472 | ||
|association_with_transcript=0bp_to_ENST00000263253_5end | |||
|cluster_id=chr22:41487711..41487798,+ | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_1_at_EP300_5end | |||
|id=chr22:41487711..41487798,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.31e-28!140;CL:0000766!3.17e-24!76;CL:0002057!4.08e-24!42;CL:0002031!4.69e-23!124;CL:0000037!8.43e-22!172;CL:0000566!8.43e-22!172;CL:0002087!2.19e-21!119;CL:0000557!6.92e-21!71;CL:0000839!1.29e-20!70;CL:0002009!1.32e-20!65;CL:0000860!1.35e-20!45;CL:0000988!2.75e-20!182;CL:0002032!1.12e-19!165;CL:0000837!1.12e-19!165;CL:0002194!1.24e-19!63;CL:0000576!1.24e-19!63;CL:0000040!1.24e-19!63;CL:0000559!1.24e-19!63;CL:0000763!1.34e-16!112;CL:0000049!1.34e-16!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.40e-19;33!CL:0002057;2.40e-19;33!CL:0000576;1.18e-15;48!CL:0000473;3.81e-15;39!CL:0000234;3.81e-15;39!CL:0000766;4.04e-12;69!CL:0002087;5.64e-08;104!CL:0000738;1.34e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.36e-31,136;CL:0000766,8.29e-28,72;CL:0002031,1.53e-25,120;CL:0000557,2.80e-24,67;CL:0002009,3.46e-24,61;CL:0000860,4.08e-24,42;CL:0002057,4.08e-24,42;CL:0000839,5.20e-24,66;CL:0002087,8.11e-24,115;CL:0000037,9.23e-24,168;CL:0002194,3.58e-23,59;CL:0000576,3.58e-23,59;CL:0000040,3.58e-23,59;CL:0000559,3.58e-23,59;CL:0000473,1.13e-22,48;CL:0000234,1.13e-22,48;CL:0000988,1.63e-22,177;CL:0002032,1.46e-21,161;CL:0000837,1.46e-21,161;CL:0000763,9.74e-19,108;CL:0000049,9.74e-19,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.40e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.17e-22!102;UBERON:0003061!3.17e-22!102;UBERON:0007023!2.03e-21!115;UBERON:0002193!2.36e-20!112;UBERON:0002371!3.19e-17!80;UBERON:0001474!1.47e-16!86;UBERON:0002405!1.41e-14!115;UBERON:0004765!3.17e-13!101;UBERON:0001434!3.17e-13!101;UBERON:0001049!5.83e-08!57;UBERON:0005068!5.83e-08!57;UBERON:0006241!5.83e-08!57;UBERON:0007135!5.83e-08!57;UBERON:0002780!6.32e-07!41;UBERON:0001890!6.32e-07!41;UBERON:0006240!6.32e-07!41;UBERON:0003080!7.93e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;4.76e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.51e-25,98;UBERON:0003061,5.51e-25,98;UBERON:0002193,8.44e-23,108;UBERON:0007023,5.90e-21,114;UBERON:0002371,5.86e-20,76;UBERON:0002405,3.51e-19,93;UBERON:0001474,4.27e-19,82;UBERON:0004765,4.34e-17,90;UBERON:0001434,1.28e-14,100;UBERON:0001049,4.79e-08,56;UBERON:0005068,4.79e-08,56;UBERON:0006241,4.79e-08,56;UBERON:0007135,4.79e-08,56;UBERON:0000073,2.21e-07,53;UBERON:0002616,2.21e-07,53;UBERON:0002780,6.32e-07,41;UBERON:0001890,6.32e-07,41;UBERON:0003080,6.32e-07,41;UBERON:0006240,6.32e-07,41 | |||
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230758082 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|short_description=p1@EP300 | |||
}} | }} |
Latest revision as of 20:55, 24 September 2015
Short description: | p1@EP300 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EP300_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000263253_5end |
EntrezGene: | EP300 |
HGNC: | 3373 |
UniProt: | Q09472 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.36e-31 | 136 |
myeloid leukocyte | 8.29e-28 | 72 |
hematopoietic lineage restricted progenitor cell | 1.53e-25 | 120 |
granulocyte monocyte progenitor cell | 2.80e-24 | 67 |
macrophage dendritic cell progenitor | 3.46e-24 | 61 |
classical monocyte | 4.08e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.08e-24 | 42 |
myeloid lineage restricted progenitor cell | 5.20e-24 | 66 |
nongranular leukocyte | 8.11e-24 | 115 |
hematopoietic stem cell | 9.23e-24 | 168 |
monopoietic cell | 3.58e-23 | 59 |
monocyte | 3.58e-23 | 59 |
monoblast | 3.58e-23 | 59 |
promonocyte | 3.58e-23 | 59 |
defensive cell | 1.13e-22 | 48 |
phagocyte | 1.13e-22 | 48 |
hematopoietic cell | 1.63e-22 | 177 |
hematopoietic oligopotent progenitor cell | 1.46e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.46e-21 | 161 |
myeloid cell | 9.74e-19 | 108 |
common myeloid progenitor | 9.74e-19 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.51e-25 | 98 |
blood island | 5.51e-25 | 98 |
hemolymphoid system | 8.44e-23 | 108 |
adult organism | 5.90e-21 | 114 |
bone marrow | 5.86e-20 | 76 |
immune system | 3.51e-19 | 93 |
bone element | 4.27e-19 | 82 |
skeletal element | 4.34e-17 | 90 |
skeletal system | 1.28e-14 | 100 |
neural tube | 4.79e-08 | 56 |
neural rod | 4.79e-08 | 56 |
future spinal cord | 4.79e-08 | 56 |
neural keel | 4.79e-08 | 56 |
regional part of nervous system | 2.21e-07 | 53 |
regional part of brain | 2.21e-07 | 53 |
regional part of forebrain | 6.32e-07 | 41 |
forebrain | 6.32e-07 | 41 |
anterior neural tube | 6.32e-07 | 41 |
future forebrain | 6.32e-07 | 41 |