MacroAPE 1083:GLI3 si: Difference between revisions
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(Created page with "{{Macroape_1083
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76-128I7;0.696983!12177-128I8;0.640724!12182-129A4;0.644852!12183-129A5;0.56219!12184-129A6;0.491129!10809-111A8;0.516436!10597-108E3;0.327718!10717-109I6;0.00726671!10455-106G5;0.748711!10534-107G3;0.0878961!10429-106D6;0.0917405!10464-106H5;0.100864!10827-111C8;0.148071!10789-110H6;0.308041!10828-111C9;0.239723!10788-110H5;0.0902854!10792-110H9;0.38049!10765-110E9;0.2143!10829-111D1;0.0851111!10830-111D2;0.216276!10831-111D3;0.0876271!10832-111D4;0.343466!10833-111D5;0.0241199!10764-110E8;0.055325!10770-110F5;0.0287648!10399-106A3;0.219808!10400-106A4;0.138342!10405-106A9;0.188839!10834-111D6;0.122255!10835-111D7;0.422708!10836-111D8;0.316876!10837-111D9;0.0789008!10699-109G6;0.390567!10802-111A1;0.142909!10796-110I4;0.627587!10010-101C1;0.054408!10810-111A9;0.319986!10421-106C7;0.0139275!10708-109H6;0.119659!12235-129G3;0.399063!12236-129G4;0.761526!12237-129G5;0.0577896!10167-103B5;0.573118!10151-102I7;0.428165!10428-106D5;0.231743!10795-110I3;0.541274!10805-111A4;0.172484!10052-101G7;5.43193e-09!10189-103D9;0.177889!10589-108D4;0.549249!10425-106D2;0.0392327!10427-106D4;0.789904!10702-109G9;0.258337!10432-106D9;0.000117253!10496-107C1;0.577351!10718-109I7;0.132617!10011-101C2;0.128267!10053-101G8;0.276771!10686-109F2;0.60963!10084-102B3;0.2108!10012-101C3;0.266832!10085-102B4;0.355888!10482-107A5;0.206991!10419-106C5;0.00821035!10080-102A8;6.84481e-05!10760-110E4;0.636295!10709-109H7;0.951978!10710-109H8;0.0862791!10703-109H1;0.248126!10719-109I8;0.000199969!10642-109A3;0.0651382!10177-103C6;0.0178546!10164-103B2;0.264677!10173-103C2;0.197625!10166-103B4;0.0993988!10083-102B2;0.0933814!10188-103D8;0.10069!10552-107I3;0.436957!10553-107I4;0.00653944!10013-101C4;0.85372!10536-107G5;0.137902!10618-108G6;0.855021!10423-106C9;0.00597788!10785-110H2;0.0242507!12238-129G6;0.140231!12239-129G7;0.326482!12240-129G8;0.103762!10416-106C2;0.991255!10801-110I9;0.519918!10766-110F1;0.448032!10824-111C5;0.773733!10825-111C6;0.48409!10826-111C7;0.523663!10454-106G4;0.669894!10409-106B4;0.167197!10638-108I8;0.719482!10636-108I6;0.745692!10513-107D9;0.664754!10420-106C6;0.760615!10082-102B1;0.124929!10014-101C5;0.673901!10070-101I7;0.412698!10452-106G2;0.20484!10453-106G3;0.322212!10449-106F8;0.394625!10042-101F6;0.261152!10069-101I6;0.247436!10193-103E4;0.384421!10631-108I1;0.266806!10438-106E6;0.0638454!10488-107B2;0.657918!10196-103E7;0.231952!10071-101I8;0.515843!10071-101I8;0.637974!10041-101F5;0.389732!10451-106G1;0.481573!10450-106F9;0.0888228!10604-108F1;0.176971!10605-108F2;0.000808817!10606-108F3;0.00988405!10603-108E9;0.000364469!10497-107C2;0.00111646!10448-106F7;0.988339!10643-109A4;0.257512!10426-106D3;0.292227!10431-106D8;0.716545!10197-103E8;0.546067!10443-106F2;0.0165447!10815-111B5;0.877384!10816-111B6;0.0537517!10817-111B7;0.0281713!10015-101C6;0.0641202!10410-106B5;0.179363!10054-101G9;0.0775218!10758-110E2;0.730395!10711-109H9;0.0681596!10040-101F4;0.444221!10470-106I2;0.338563!10415-106C1;0.614484!10198-103E9;0.271858!10614-108G2;0.510638!10612-108F9;0.981815!10549-107H9;0.161562!10615-108G3;0.0282309!10487-107B1;0.00370328!10433-106E1;0.0347766!10688-109F4;0.631228!10444-106F3;0.0640465!10444-106F3;0.218178!10485-107A8;0.193723!10413-106B8;0.0372489!10175-103C4;0.957979!10161-103A8;0.227434!12131-128D7;0.112751!10624-108H3;0.00142097!10712-109I1;0.0140387!10205-103F7;0.691257!10206-103F8;0.890043!10207-103F9;0.889794!10050-101G5;0.425743!10051-101G6;0.984255!10016-101C7;0.542572!10046-101G1;0.495574!10778-110G4;0.781518!10633-108I3;0.00813444!10818-111B8;0.0318331!10819-111B9;0.182354!10820-111C1;0.233729!10484-107A7;0.216524!10808-111A7;0.00585464!10169-103B7;0.112187!10153-102I9;0.295735!13425-144D5;0.217476!13433-144E4;0.782736!13437-144E8;0.833238!11904-125F5;0.856029!11905-125F6;0.484734!10039-101F3;0.56307!10791-110H8;0.354605!10017-101C8;0.191088!10045-101F9;0.0190386!10509-107D5;0.605635!10839-111E2;0.151494!10692-109F8;0.350363!10079-102A7;0.955132!10078-102A6;0.994461!10721-110A1;0.497493!10569-108B2;0.0060382!10570-108B3;0.00627698!10571-108B4;0.000253273!10647-109A8;0.00354371!10752-110D5;0.750673!10782-110G8;0.49361!10726-110A6;8.27007e-05!10018-101C9;0.337952!10086-102B5;0.849597!10182-103D2;0.808476!10165-103B3;0.196345!10499-107C4;0.207388!10408-106B3;0.558117!10019-101D1;0.589097!10068-101I5;0.449497!10075-102A3;0.851653!10077-102A5;0.47284!10727-110A7;0.884122!10775-110G1;0.077701!10412-106B7;0.119764!12231-129F8;0.701403!12232-129F9;0.640763!12233-129G1;0.872831!12234-129G2;0.54654!10414-106B9;0.442218!10170-103B8;0.175913!10183-103D3;0.28448!10150-102I6;0.262328!10174-103C3;0.210736!10155-103A2;0.501307!10038-101F2;0.294427!10838-111E1;0.411091!10759-110E3;0.0302195!10514-107E1;0.859811!10465-106H6;0.0873047!10691-109F7;0.263428!10843-111E6;0.347338!10844-111E7;0.000313584!11747-123G1;0.0102229!11748-123G2;0.016031!11749-123G3;0.0240981!11750-123G4;0.0034149!11751-123G5;0.0315162!11840-124H4;0.000329745!11752-123G6;1.96428e-05!11753-123G7;0.151538!11754-123G8;0.00255254!11755-123G9;0.0135883!11756-123H1;0.032268!11833-124G6;0.000282332!11760-123H5;0.0517756!11836-124G9;0.000880061!11758-123H3;0.00642536!11835-124G8;3.16402e-05!11762-123H7;0.000547234!11838-124H2;0.00018063!11757-123H2;0.000100804!11759-123H4;3.64475e-05!11761-123H6;0.0566074!11842-124H6;0.000346869!11837-124H1;0.00293699!10568-108B1;3.25931e-05!13230-141I8;0.206133!13231-141I9;2.06262e-05!10696-109G3;3.75127e-05!10493-107B7;0.000341732!10494-107B8;0.448666!10850-111F4;0.286323!10851-111F5;0.466479!10852-111F6;0.157322!10853-111F7;0.104902!10854-111F8;0.552723!10855-111F9;0.672124!10856-111G1;0.135208!10847-111F1;0.220448!10846-111E9;0.0164732!10848-111F2;0.492309!10845-111E8;0.169894!10857-111G2;0.35194!10858-111G3;0.70858!10156-103A3;0.481252!11901-125F2;0.201398!11902-125F3;0.914945!11903-125F4;0.444586!10689-109F5;0.436018!10648-109A9;0.340166!10784-110H1;0.135401!10744-110C6;0.0940445!10772-110F7;0.605843!10474-106I6;0.0958777!10600-108E6;0.205607!10684-109E9;0.659353!12226-129F3;0.378686!12227-129F4;0.958772!10508-107D4;0.592757!10539-107G8;0.0152715!10607-108F4;0.194075!10555-107I6;0.00252826!10774-110F9;0.00860048!10637-108I7;0.0960891!10663-109C6;0.0338268!10728-110A8;0.0439934!10729-110A9;0.0222331!10430-106D7;2.57794e-08!10730-110B1;0.000863326!10813-111B3;0.217328!10812-111B2;0.00486991!10037-101F1;0.27997!10172-103C1;0.328904!10163-103B1;0.177234!10076-102A4;0.169642!10073-102A1;0.287238!10036-101E9;0.330164!10195-103E6;0.302323!10277-104E7;0.298421!10434-106E2;0.297536!10550-107I1;0.572768!10545-107H5;0.153963!10544-107H4;0.880533!10704-109H2;0.336207!10510-107D6;0.0223537!10558-107I9;0.256041!10020-101D2;0.845324!10732-110B3;0.587618!10049-101G4;0.113409!10698-109G5;0.319108!10437-106E5;0.0342245!10417-106C3;0.712497!10035-101E8;0.95535!10171-103B9;0.323152!10157-103A4;0.205295!10034-101E7;0.219052!10072-101I9;0.303868!10199-103F1;0.261635!10200-103F2;0.320743!10697-109G4;0.102199!10723-110A3;0.410511!10179-103C8;0.834251!10160-103A7;0.113232!10180-103C9;0.0664955!10162-103A9;0.261361!10021-101D3;0.205871!10840-111E3;0.113224!10706-109H4;0.500282!10033-101E6;0.421432!10032-101E5;0.271728!10490-107B4;0.291285!10439-106E7;0.119739!10022-101D4;0.190546!10176-103C5;0.416658!10469-106I1;0.21088!10067-101I4;0.613194!10411-106B6;0.312733!10471-106I3;0.787977!10030-101E3;0.967553!10475-106I7;0.833441!10787-110H4;0.00443615!10477-106I9;0.727603!10695-109G2;0.609778!11771-123I7;0.649104!11772-123I8;0.546032!11773-123I9;0.116882!10093-102C3;0.0823158!10442-106F1;0.515453!10442-106F1;0.942801!10201-103F3;0.973202!10639-108I9;0.639649!11843-124H7;0.72973!11841-124H5;0.869793!10693-109F9;0.6144!10436-106E4;0.344683!10483-107A6;0.0970884!10282-104F3;0.987649!10023-101D5;0.260626!10066-101I3;0.73136!10065-101I2;0.20349!10800-110I8;0.157854!10610-108F7;0.103545!10841-111E4;0.00745627!10541-107H1;0.000492342!10842-111E5;0.00417813!10562-108A4;0.0035468!10024-101D6;0.0194913!10064-101I1;0.466676!10609-108F6;0.172973!10048-101G3;0.911863!10781-110G7;0.600949!10181-103D1;0.00669091!10159-103A6;0.347749!10056-101H2;0.281223!10737-110B8;0.818533!10025-101D7;0.000531412!10044-101F8;0.917165!10424-106D1;0.981551!10463-106H4;0.331529!10616-108G4;0.93076!10486-107A9;0.660082!10062-101H8;0.0194476!10202-103F4;0.929827!10158-103A5;0.957768!10441-106E9;0.194564!10031-101E4;0.0817549!10063-101H9;0.326694!10063-101H9;0.266294!11763-123H8;0.365834!11765-123I1;0.00661689!11768-123I4;0.017844!10807-111A6;0.00061183!10790-110H7;0.735078!10798-110I6;0.587997!10786-110H3;0.45802!10591-108D6;0.409391!10593-108D8;0.20969!10590-108D5;0.0455269!10026-101D8;0.360424!10096-102C6;0.210639!10168-103B6;0.383307!10154-103A1;0.177086!10209-103G2;0.173884!10061-101H7;0.0767091!10027-101D9;0.184763!10043-101F7;0.352979!10783-110G9;0.654193!10028-101E1;0.674842!10060-101H6;0.629288!10203-103F5;0.978048!10059-101H5;0.205699!10047-101G2;0.257561!10029-101E2;0.169184!10058-101H4;0.0958195!10418-106C4;0.286462!10492-107B6;0.459789!10694-109G1;0.355172!10797-110I5;0.167898!10057-101H3;0.118182!10100-102D1;0.0764998!10055-101H1;0.463789!10204-103F6;0.105692!10191-103E2;0.945877!10563-108A5;0.271602 | ||
|name=GLI3_si | |name=GLI3_si | ||
|tomtom_result=Macho-1#MA0118.1;-1;0.000402369;0.191528;0.383055;9;TTGGGTGGTCC;TGGGGGGTC;+!RREB1#MA0073.1;5;0.00147124;0.700311;0.700311;11;TTGGGTGGTCC;TGGGGGGGGGTGGTTTGGGG;-!opa#MA0456.1;2;0.00303255;1.4435;0.733079;10;TTGGGTGGTCC;CAGCGGGGGGTC;-!RUNX1#MA0002.2;0;0.00308016;1.46616;0.733079;11;TTGGGTGGTCC;GTCTGTGGTTT;+!Lag1#MA0193.1;-1;0.00602002;2.86553;0.895785;7;TTGGGTGGTCC;TTGGTAG;-!Klf4#MA0039.2;-1;0.00658666;3.13525;0.895785;10;TTGGGTGGTCC;TGGGTGGGGC;+!z#MA0255.1;0;0.00658666;3.13525;0.895785;10;TTGGGTGGTCC;TTGAGTGATT;+!Arnt::Ahr#MA0006.1;-1;0.00957642;4.55838;1;6;TTGGGTGGTCC;TGCGTG;+!SWI5#MA0402.1;-2;0.0099017;4.71321;1;8;TTGGGTGGTCC;TGCTGGTT;+!RAP1#MA0359.1;3;0.0131961;6.28132;1;7;TTGGGTGGTCC;TGTATGGGTG;-!znf143#MA0088.1;10;0.0143407;6.82615;1;10;TTGGGTGGTCC;GCAAGGCATGATGGGAAATC;-!Egr1#MA0162.1;-1;0.0152019;7.23609;1;10;TTGGGTGGTCC;TGCGTGGGCGT;+!ACE2#MA0267.1;-2;0.0203084;9.6668;1;7;TTGGGTGGTCC;TGCTGGT;- | |||
}} | }} |
Latest revision as of 12:08, 7 September 2012
Full Name: GLI3_si
Motif matrix | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
---|---|---|---|---|---|---|---|---|
Macho-1#MA0118.1 | -1 | 0.000402369 | 0.191528 | 0.383055 | 9 | TTGGGTGGTCC | TGGGGGGTC | + |
RREB1#MA0073.1 | 5 | 0.00147124 | 0.700311 | 0.700311 | 11 | TTGGGTGGTCC | TGGGGGGGGGTGGTTTGGGG | - |
opa#MA0456.1 | 2 | 0.00303255 | 1.4435 | 0.733079 | 10 | TTGGGTGGTCC | CAGCGGGGGGTC | - |
RUNX1#MA0002.2 | 0 | 0.00308016 | 1.46616 | 0.733079 | 11 | TTGGGTGGTCC | GTCTGTGGTTT | + |
Lag1#MA0193.1 | -1 | 0.00602002 | 2.86553 | 0.895785 | 7 | TTGGGTGGTCC | TTGGTAG | - |
Klf4#MA0039.2 | -1 | 0.00658666 | 3.13525 | 0.895785 | 10 | TTGGGTGGTCC | TGGGTGGGGC | + |
z#MA0255.1 | 0 | 0.00658666 | 3.13525 | 0.895785 | 10 | TTGGGTGGTCC | TTGAGTGATT | + |
Arnt::Ahr#MA0006.1 | -1 | 0.00957642 | 4.55838 | 1 | 6 | TTGGGTGGTCC | TGCGTG | + |
SWI5#MA0402.1 | -2 | 0.0099017 | 4.71321 | 1 | 8 | TTGGGTGGTCC | TGCTGGTT | + |
RAP1#MA0359.1 | 3 | 0.0131961 | 6.28132 | 1 | 7 | TTGGGTGGTCC | TGTATGGGTG | - |
znf143#MA0088.1 | 10 | 0.0143407 | 6.82615 | 1 | 10 | TTGGGTGGTCC | GCAAGGCATGATGGGAAATC | - |
Egr1#MA0162.1 | -1 | 0.0152019 | 7.23609 | 1 | 10 | TTGGGTGGTCC | TGCGTGGGCGT | + |
ACE2#MA0267.1 | -2 | 0.0203084 | 9.6668 | 1 | 7 | TTGGGTGGTCC | TGCTGGT | - |