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MacroAPE 1083:CNhs13449 bl f1: Difference between revisions

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.00123313!10534-107G3;0.00346016!10429-106D6;0.01372!10464-106H5;0.012435!10827-111C8;0.00296825!10789-110H6;0.00588677!10828-111C9;0.0183454!10788-110H5;0.0115237!10792-110H9;0.00781349!10765-110E9;0.00532515!10829-111D1;0.0236436!10830-111D2;0.023978!10831-111D3;0.006659!10832-111D4;2.99624e-06!10833-111D5;0.0116623!10764-110E8;0.0177069!10770-110F5;0.0359457!10399-106A3;0.0734923!10400-106A4;0.00415422!10405-106A9;0.00212266!10834-111D6;0.00302353!10835-111D7;0.00952253!10836-111D8;0.000537817!10837-111D9;0.00281322!10699-109G6;0.00521213!10802-111A1;0.0299836!10796-110I4;0.004032!10010-101C1;0.127824!10810-111A9;0.00120046!10421-106C7;0.000591426!10708-109H6;0.0539534!12235-129G3;0.00224931!12236-129G4;0.824519!12237-129G5;0.721001!10167-103B5;0.790295!10151-102I7;0.0176378!10428-106D5;0.00517653!10795-110I3;0.336005!10805-111A4;0.00233841!10052-101G7;0.0688869!10189-103D9;0.0043313!10589-108D4;0.0985584!10425-106D2;0.00365673!10427-106D4;0.947363!10702-109G9;0.0217058!10432-106D9;0.250759!10496-107C1;0.022587!10718-109I7;0.0396842!10011-101C2;0.0488697!10053-101G8;0.0020988!10686-109F2;0.827192!10084-102B3;0.958984!10012-101C3;0.000593659!10085-102B4;0.000749674!10482-107A5;0.0880007!10419-106C5;0.000387341!10080-102A8;0.0329624!10760-110E4;0.0316104!10709-109H7;0.0630132!10710-109H8;0.0194011!10703-109H1;0.00174234!10719-109I8;0.0775634!10642-109A3;0.0606027!10177-103C6;0.19214!10164-103B2;0.00628204!10173-103C2;0.00837418!10166-103B4;0.00185649!10083-102B2;0.000863387!10188-103D8;7.72355e-05!10552-107I3;0.000172408!10553-107I4;0.0235019!10013-101C4;0.000896239!10536-107G5;0.00466519!10618-108G6;0.229831!10423-106C9;0.136589!10785-110H2;0.236925!12238-129G6;0.0111381!12239-129G7;0.041007!12240-129G8;0.459597!10416-106C2;0.00914952!10801-110I9;0.00478481!10766-110F1;0.0245845!10824-111C5;0.00118171!10825-111C6;0.000126847!10826-111C7;0.000133973!10454-106G4;0.000175457!10409-106B4;0.00157468!10638-108I8;0.00239226!10636-108I6;0.00060003!10513-107D9;0.00123559!10420-106C6;0.0242198!10082-102B1;0.000666291!10014-101C5;0.0669712!10070-101I7;0.00351543!10452-106G2;0.00878603!10453-106G3;0.0715226!10449-106F8;0.0364683!10042-101F6;0.0198885!10069-101I6;4.33543e-05!10193-103E4;0.0146836!10631-108I1;0.00072187!10438-106E6;0.000477008!10488-107B2;0.0936009!10196-103E7;0.034992!10071-101I8;0.152768!10071-101I8;0.0190564!10041-101F5;0.0930565!10451-106G1;0.000560158!10450-106F9;0.000663381!10604-108F1;6.53368e-06!10605-108F2;0.0654001!10606-108F3;0.0528886!10603-108E9;0.106382!10497-107C2;0.0636446!10448-106F7;0.00210321!10643-109A4;0.136067!10426-106D3;0.0592012!10431-106D8;0.0313276!10197-103E8;0.0191064!10443-106F2;0.00320649!10815-111B5;0.0543707!10816-111B6;0.0119528!10817-111B7;0.0117074!10015-101C6;0.0107963!10410-106B5;0.00241909!10054-101G9;0.0219367!10758-110E2;0.000768708!10711-109H9;0.352593!10040-101F4;0.018594!10470-106I2;0.00262531!10415-106C1;0.000921268!10198-103E9;0.0162457!10614-108G2;0.00165256!10612-108F9;0.000391667!10549-107H9;0.00762343!10615-108G3;0.0201082!10487-107B1;0.0032442!10433-106E1;0.0143433!10688-109F4;0.00793926!10444-106F3;0.00951387!10444-106F3;0.0121632!10485-107A8;0.0146224!10413-106B8;0.284896!10175-103C4;0.254144!10161-103A8;0.000776491!12131-128D7;0.000346122!10624-108H3;0.300652!10712-109I1;0.0837903!10205-103F7;0.00860654!10206-103F8;0.000560987!10207-103F9;0.00281756!10050-101G5;0.00245513!10051-101G6;0.0249396!10016-101C7;0.00330672!10046-101G1;0.00213407!10778-110G4;0.00927102!10633-108I3;0.143116!10818-111B8;0.150488!10819-111B9;0.017747!10820-111C1;0.0240453!10484-107A7;0.0190154!10808-111A7;5.53058e-05!10169-103B7;0.00878455!10153-102I9;0.00815234!13425-144D5;0.00177981!13433-144E4;0.0137977!13437-144E8;0.00503318!11904-125F5;0.00323576!11905-125F6;0.059232!10039-101F3;0.164226!10791-110H8;0.00223544!10017-101C8;0.153707!10045-101F9;0.0286037!10509-107D5;0.0508352!10839-111E2;0.00866729!10692-109F8;0.0396704!10079-102A7;0.0236676!10078-102A6;0.00306479!10721-110A1;0.00309285!10569-108B2;0.0728998!10570-108B3;0.183834!10571-108B4;0.137714!10647-109A8;0.173235!10752-110D5;0.000255119!10782-110G8;0.00540587!10726-110A6;0.968111!10018-101C9;0.000801191!10086-102B5;0.0347781!10182-103D2;0.312196!10165-103B3;0.000422344!10499-107C4;0.000293424!10408-106B3;0.00150173!10019-101D1;0.054179!10068-101I5;0.00992902!10075-102A3;0.0122275!10077-102A5;0.0538103!10727-110A7;0.053149!10775-110G1;0.108536!10412-106B7;0.000777366!12231-129F8;0.0495333!12232-129F9;0.196153!12233-129G1;0.0732949!12234-129G2;0.0700477!10414-106B9;0.406759!10170-103B8;0.00870143!10183-103D3;0.00789021!10150-102I6;0.0085424!10174-103C3;0.00361019!10155-103A2;5.84393e-05!10038-101F2;1.44663e-05!10838-111E1;1.62991e-05!10759-110E3;0.374025!10514-107E1;0.229606!10465-106H6;6.48069e-05!10691-109F7;0.0126687!10843-111E6;0.293471!10844-111E7;0.0441925!11747-123G1;0.614454!11748-123G2;0.357528!11749-123G3;0.361939!11750-123G4;0.494814!11751-123G5;0.623437!11840-124H4;0.327797!11752-123G6;0.104986!11753-123G7;0.434362!11754-123G8;0.248208!11755-123G9;0.121233!11756-123H1;0.32569!11833-124G6;0.766102!11760-123H5;0.795299!11836-124G9;0.93542!11758-123H3;0.322728!11835-124G8;0.313696!11762-123H7;0.413416!11838-124H2;0.961886!11757-123H2;0.382395!11759-123H4;0.296197!11761-123H6;0.415391!11842-124H6;0.803521!11837-124H1;0.352864!10568-108B1;0.960322!13230-141I8;0.901074!13231-141I9;0.293977!10696-109G3;0.457017!10493-107B7;0.00839716!10494-107B8;0.0226571!10850-111F4;0.000617406!10851-111F5;0.0275372!10852-111F6;0.152155!10853-111F7;0.802231!10854-111F8;0.036108!10855-111F9;0.563758!10856-111G1;0.37902!10847-111F1;0.0150852!10846-111E9;0.175389!10848-111F2;0.0108309!10845-111E8;0.00726007!10857-111G2;0.0468091!10858-111G3;0.294224!10156-103A3;0.130126!11901-125F2;0.00220688!11902-125F3;0.0899212!11903-125F4;0.00469115!10689-109F5;0.0100236!10648-109A9;0.00235152!10784-110H1;0.0989944!10744-110C6;0.00642317!10772-110F7;0.0579442!10474-106I6;0.0043161!10600-108E6;0.123937!10684-109E9;0.233024!12226-129F3;0.0656167!12227-129F4;0.511717!10508-107D4;0.204762!10539-107G8;0.614795!10607-108F4;0.779642!10555-107I6;0.0499853!10774-110F9;0.950611!10637-108I7;9.7664e-06!10663-109C6;0.0368963!10728-110A8;0.337937!10729-110A9;0.0294071!10430-106D7;0.0654428!10730-110B1;0.00818075!10813-111B3;0.165698!10812-111B2;0.0658574!10037-101F1;0.0836103!10172-103C1;0.00157707!10163-103B1;0.00730255!10076-102A4;0.00170148!10073-102A1;0.00266848!10036-101E9;0.120164!10195-103E6;0.00123754!10277-104E7;0.00193346!10434-106E2;0.000557623!10550-107I1;0.0484441!10545-107H5;0.00140418!10544-107H4;0.139612!10704-109H2;0.0130086!10510-107D6;0.500796!10558-107I9;0.0676675!10020-101D2;0.0108643!10732-110B3;0.00246134!10049-101G4;0.0856474!10698-109G5;0.576803!10437-106E5;0.158759!10417-106C3;0.11582!10035-101E8;0.0103208!10171-103B9;0.00141343!10157-103A4;0.00568551!10034-101E7;0.00228428!10072-101I9;0.000883014!10199-103F1;0.188045!10200-103F2;0.0533471!10697-109G4;0.00058325!10723-110A3;0.511412!10179-103C8;0.0101262!10160-103A7;0.0011441!10180-103C9;0.0003632!10162-103A9;0.111725!10021-101D3;0.063334!10840-111E3;0.00228188!10706-109H4;0.00469357!10033-101E6;0.752464!10032-101E5;0.00037105!10490-107B4;0.000806484!10439-106E7;1.84618e-05!10022-101D4;0.0674892!10176-103C5;0.00429493!10469-106I1;0.0119417!10067-101I4;6.44153e-05!10411-106B6;0.0187255!10471-106I3;0.226879!10030-101E3;8.44431e-08!10475-106I7;8.60243e-05!10787-110H4;0.200184!10477-106I9;0.00167212!10695-109G2;0.0136947!11771-123I7;0.182083!11772-123I8;0.964429!11773-123I9;0.0423369!10093-102C3;0.0107416!10442-106F1;0.0116951!10442-106F1;0.0167936!10201-103F3;0.0152289!10639-108I9;0.0731696!11843-124H7;0.0178665!11841-124H5;0.0236979!10693-109F9;0.0983368!10436-106E4;0.000175561!10483-107A6;0.116196!10282-104F3;0.0456202!10023-101D5;0.00424771!10066-101I3;0.00900469!10065-101I2;0.237711!10800-110I8;0.0225172!10610-108F7;0.0350768!10841-111E4;0.249818!10541-107H1;0.0453254!10842-111E5;0.00808542!10562-108A4;0.408115!10024-101D6;0.0684755!10064-101I1;0.000226268!10609-108F6;0.0966954!10048-101G3;0.0987657!10781-110G7;0.00566884!10181-103D1;0.0104243!10159-103A6;0.00043751!10056-101H2;0.000188445!10737-110B8;0.00186467!10025-101D7;0.674474!10044-101F8;0.00622055!10424-106D1;0.00745137!10463-106H4;0.0123369!10616-108G4;0.00133486!10486-107A9;0.122685!10062-101H8;0.0054913!10202-103F4;0.000631785!10158-103A5;0.0378063!10441-106E9;9.88537e-05!10031-101E4;0.0038829!10063-101H9;0.00108926!10063-101H9;0.191413!11763-123H8;0.0010684!11765-123I1;0.642328!11768-123I4;0.360003!10807-111A6;0.494065!10790-110H7;0.0538486!10798-110I6;0.020935!10786-110H3;0.000816146!10591-108D6;0.0320393!10593-108D8;0.00882226!10590-108D5;0.0497451!10026-101D8;0.00205046!10096-102C6;0.0599888!10168-103B6;0.429762!10154-103A1;0.000109592!10209-103G2;0.000523687!10061-101H7;0.0017013!10027-101D9;0.0151239!10043-101F7;0.570142!10783-110G9;0.337701!10028-101E1;0.075815!10060-101H6;0.0166466!10203-103F5;0.0152083!10059-101H5;0.00184064!10047-101G2;0.0130985!10029-101E2;0.0815455!10058-101H4;0.00116738!10418-106C4;0.00478815!10492-107B6;0.0181075!10694-109G1;0.00370247!10797-110I5;0.850573!10057-101H3;0.00105669!10100-102D1;0.0115383!10055-101H1;0.00557857!10204-103F6;0.0151644!10191-103E2;0.00511486!10563-108A5;0.00623453
|name=CNhs13449_bl_f1
|name=CNhs13449_bl_f1
|tomtom_result=SOX10#MA0442.1;-2;0.00405173;1.92863;1;6;GGCTCTGTGCTT;CTTTGT;+!RUNX1#MA0002.2;-2;0.00521205;2.48094;1;10;GGCTCTGTGCTT;GTCTGTGGTTT;+!REST#MA0138.2;0;0.0089688;4.26915;1;12;GGCTCTGTGCTT;GGCGCTGTCCATGGTGCTGAA;-!D#MA00445.1;0;0.0117085;5.57327;1;11;GGCTCTGTGCTT;TCCATTGTTCT;+!REST#MA0138.2;-1;0.0178294;8.48678;1;11;GGCTCTGTGCTT;GCGCTGTCCATGGTGCTGA;+!Sox2#MA0143.1;-1;0.0179861;8.5614;1;11;GGCTCTGTGCTT;CCTTTGTTATGCAAA;+
}}
}}

Latest revision as of 12:25, 7 September 2012

Full Name: CNhs13449_bl_f1

Motif matrix
POACGT
1177.3279260601955511.93928971681883247.57854984702422160.90745079010998
26.698380337545667109.02357882713487390.903604389685991.12765285978256
357.18818309835474446.28490767280984.31588276307479789.96424287990968
456.472763254474453.5962123619543540.7443258065047681536.9399149912153
50.1700582738574112349.8451732871846137.9243731095981109.81361174350863
61.39653279009290631.2232012683200393.022178540567248592.1113038151691
70.02.077347884192721566.797590840738428.878277689218155
813.81951994440729732.5072753167864174.34301295327106477.08340819968396
95.85619008409628451.94114990200701379.6111530785651160.34472334948035
1010.899927601006697385.89108926064230.065829947654876170.89636960484535
1199.5976303252204118.905833783905466.3208106356808775372.92894166934207
1276.2757744530843138.72981998722641231.72447942166946251.02314255216825

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SOX10#MA0442.1-20.004051731.9286316GGCTCTGTGCTTCTTTGT+
RUNX1#MA0002.2-20.005212052.48094110GGCTCTGTGCTTGTCTGTGGTTT+
REST#MA0138.200.00896884.26915112GGCTCTGTGCTTGGCGCTGTCCATGGTGCTGAA-
D#MA00445.100.01170855.57327111GGCTCTGTGCTTTCCATTGTTCT+
REST#MA0138.2-10.01782948.48678111GGCTCTGTGCTTGCGCTGTCCATGGTGCTGA+
Sox2#MA0143.1-10.01798618.5614111GGCTCTGTGCTTCCTTTGTTATGCAAA+
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