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MacroAPE 1083:Motif585: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;122209;0;0;0!02;52716;23068;38790;7635!03;122209;0;0;0!04;0;0;122209;0!05;71424;15204;35581;0!06;122209;0;0;0!07;122209;0;0;0 |macroape_10...")
 
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0.0169008!12176-128I7;0.0185097!12177-128I8;0.0164376!12182-129A4;0.0165906!12183-129A5;0.0195272!12184-129A6;0.0180289!10809-111A8;0.0210426!10597-108E3;0.00638275!10717-109I6;0.0159471!10455-106G5;0.0154147!10534-107G3;0.128499!10429-106D6;0.634768!10464-106H5;0.316103!10827-111C8;0.347563!10789-110H6;0.0387168!10828-111C9;0.029372!10788-110H5;0.0242194!10792-110H9;0.128255!10765-110E9;0.025547!10829-111D1;0.0729701!10830-111D2;0.125418!10831-111D3;0.0379022!10832-111D4;0.03067!10833-111D5;0.0982796!10764-110E8;0.128515!10770-110F5;0.145746!10399-106A3;0.0410493!10400-106A4;0.168192!10405-106A9;0.150534!10834-111D6;0.158869!10835-111D7;0.07569!10836-111D8;0.603825!10837-111D9;0.440647!10699-109G6;0.0436863!10802-111A1;0.16416!10796-110I4;0.0579516!10010-101C1;0.0123469!10810-111A9;0.0444645!10421-106C7;0.00497292!10708-109H6;0.183503!12235-129G3;0.039261!12236-129G4;0.0606847!12237-129G5;0.0726481!10167-103B5;0.0315171!10151-102I7;0.598551!10428-106D5;0.637823!10795-110I3;0.0752919!10805-111A4;0.743185!10052-101G7;0.027722!10189-103D9;0.41571!10589-108D4;0.00833123!10425-106D2;0.0430844!10427-106D4;0.0727972!10702-109G9;0.110562!10432-106D9;0.250297!10496-107C1;0.0316944!10718-109I7;0.0261256!10011-101C2;0.122992!10053-101G8;0.055719!10686-109F2;0.0170001!10084-102B3;0.100676!10012-101C3;0.325007!10085-102B4;0.576616!10482-107A5;0.286281!10419-106C5;0.0181647!10080-102A8;0.0147227!10760-110E4;0.222272!10709-109H7;0.0142505!10710-109H8;0.0678542!10703-109H1;0.0181301!10719-109I8;0.0250096!10642-109A3;0.0243631!10177-103C6;0.0474728!10164-103B2;0.471371!10173-103C2;0.631148!10166-103B4;0.35543!10083-102B2;0.404647!10188-103D8;0.220556!10552-107I3;0.359996!10553-107I4;0.0111816!10013-101C4;0.00946814!10536-107G5;0.376927!10618-108G6;0.0838584!10423-106C9;0.0333399!10785-110H2;0.0396181!12238-129G6;0.0158009!12239-129G7;0.663306!12240-129G8;0.0750488!10416-106C2;0.0211238!10801-110I9;0.201035!10766-110F1;0.0454112!10824-111C5;0.0382854!10825-111C6;0.0635575!10826-111C7;0.062936!10454-106G4;0.105168!10409-106B4;0.0442327!10638-108I8;0.0248761!10636-108I6;0.00901631!10513-107D9;0.00899333!10420-106C6;0.0099113!10082-102B1;0.0138998!10014-101C5;0.292243!10070-101I7;0.0507416!10452-106G2;0.156905!10453-106G3;0.667543!10449-106F8;0.370869!10042-101F6;0.352989!10069-101I6;0.726685!10193-103E4;0.904316!10631-108I1;0.367103!10438-106E6;0.445658!10488-107B2;0.00827153!10196-103E7;0.0129043!10071-101I8;0.127303!10071-101I8;0.0240038!10041-101F5;0.164523!10451-106G1;0.00909225!10450-106F9;0.00407277!10604-108F1;0.00856859!10605-108F2;0.0355761!10606-108F3;0.0387145!10603-108E9;0.0446669!10497-107C2;0.0560311!10448-106F7;0.0215585!10643-109A4;0.0402953!10426-106D3;0.00416752!10431-106D8;0.0157492!10197-103E8;0.0153157!10443-106F2;0.555634!10815-111B5;0.0148567!10816-111B6;0.0179386!10817-111B7;0.016566!10015-101C6;0.0167289!10410-106B5;0.141192!10054-101G9;0.0350227!10758-110E2;0.44097!10711-109H9;0.0822058!10040-101F4;0.0587468!10470-106I2;0.412482!10415-106C1;0.0111827!10198-103E9;0.0713303!10614-108G2;0.0596276!10612-108F9;0.00676565!10549-107H9;0.0107162!10615-108G3;0.00991784!10487-107B1;0.0418817!10433-106E1;0.0534488!10688-109F4;0.141541!10444-106F3;0.0134475!10444-106F3;0.0336107!10485-107A8;0.0366422!10413-106B8;0.0371786!10175-103C4;0.0342861!10161-103A8;0.562222!12131-128D7;0.90226!10624-108H3;0.0937227!10712-109I1;0.0753139!10205-103F7;0.107684!10206-103F8;0.753798!10207-103F9;0.263696!10050-101G5;0.0904081!10051-101G6;0.0486037!10016-101C7;0.581923!10046-101G1;0.82983!10778-110G4;0.595714!10633-108I3;0.309569!10818-111B8;0.00973169!10819-111B9;0.0149624!10820-111C1;0.0153085!10484-107A7;0.016532!10808-111A7;0.00895483!10169-103B7;0.118911!10153-102I9;0.65268!13425-144D5;0.696972!13433-144E4;0.0157987!13437-144E8;0.0143492!11904-125F5;0.0149307!11905-125F6;0.0279204!10039-101F3;0.0487246!10791-110H8;0.453758!10017-101C8;0.00809023!10045-101F9;0.0949768!10509-107D5;0.730423!10839-111E2;0.218111!10692-109F8;0.0131659!10079-102A7;0.0125321!10078-102A6;0.20589!10721-110A1;0.690073!10569-108B2;0.00623671!10570-108B3;0.0798613!10571-108B4;0.185002!10647-109A8;0.0185892!10752-110D5;0.0270784!10782-110G8;0.138553!10726-110A6;0.0354349!10018-101C9;0.0174608!10086-102B5;0.0553789!10182-103D2;0.324832!10165-103B3;0.460566!10499-107C4;0.886151!10408-106B3;0.0194033!10019-101D1;0.0510758!10068-101I5;0.0227097!10075-102A3;0.0693795!10077-102A5;0.0180922!10727-110A7;0.0127391!10775-110G1;0.0879669!10412-106B7;0.0898115!12231-129F8;0.0950981!12232-129F9;0.823302!12233-129G1;0.512685!12234-129G2;0.708853!10414-106B9;0.518886!10170-103B8;0.0179155!10183-103D3;0.426512!10150-102I6;0.396132!10174-103C3;0.720068!10155-103A2;0.663002!10038-101F2;0.770612!10838-111E1;0.935069!10759-110E3;0.0156485!10514-107E1;0.0127504!10465-106H6;0.0104592!10691-109F7;0.0437298!10843-111E6;0.0772961!10844-111E7;0.0336534!11747-123G1;0.0245182!11748-123G2;0.0665016!11749-123G3;0.0909579!11750-123G4;0.204441!11751-123G5;0.0636789!11840-124H4;0.20977!11752-123G6;0.219113!11753-123G7;0.173083!11754-123G8;0.118548!11755-123G9;0.17618!11756-123H1;0.0747627!11833-124G6;0.209058!11760-123H5;0.108652!11836-124G9;0.0701991!11758-123H3;0.0826147!11835-124G8;0.146621!11762-123H7;0.162391!11838-124H2;0.0804463!11757-123H2;0.256168!11759-123H4;0.132505!11761-123H6;0.0929616!11842-124H6;0.0996214!11837-124H1;0.10405!10568-108B1;0.318751!13230-141I8;0.0251805!13231-141I9;0.0889381!10696-109G3;0.111884!10493-107B7;0.104858!10494-107B8;0.00325211!10850-111F4;0.0370364!10851-111F5;0.0362568!10852-111F6;0.036758!10853-111F7;0.0190093!10854-111F8;0.0177719!10855-111F9;0.048958!10856-111G1;0.0123038!10847-111F1;0.0990456!10846-111E9;0.042824!10848-111F2;0.0777124!10845-111E8;0.0720397!10857-111G2;0.0322769!10858-111G3;0.00692128!10156-103A3;0.0345364!11901-125F2;0.684036!11902-125F3;0.0459033!11903-125F4;0.0456276!10689-109F5;0.0343861!10648-109A9;0.0110578!10784-110H1;0.0103887!10744-110C6;0.0744725!10772-110F7;0.0485641!10474-106I6;0.144015!10600-108E6;0.13239!10684-109E9;0.0134175!12226-129F3;0.0190885!12227-129F4;0.0288004!10508-107D4;0.344952!10539-107G8;0.0214875!10607-108F4;0.0292162!10555-107I6;0.0232677!10774-110F9;0.0189539!10637-108I7;0.0111121!10663-109C6;0.0370741!10728-110A8;0.0178633!10729-110A9;0.00863452!10430-106D7;0.197374!10730-110B1;0.961622!10813-111B3;0.0526956!10812-111B2;0.0310308!10037-101F1;0.0661355!10172-103C1;0.439854!10163-103B1;0.359313!10076-102A4;0.675487!10073-102A1;0.272723!10036-101E9;0.210566!10195-103E6;0.311007!10277-104E7;0.345352!10434-106E2;0.161212!10550-107I1;0.0117604!10545-107H5;0.00844591!10544-107H4;0.0226729!10704-109H2;0.0234152!10510-107D6;0.233117!10558-107I9;0.0373571!10020-101D2;0.0156267!10732-110B3;0.255386!10049-101G4;0.00610537!10698-109G5;0.054273!10437-106E5;0.0297939!10417-106C3;0.0833845!10035-101E8;0.0978273!10171-103B9;0.387739!10157-103A4;0.354605!10034-101E7;0.644453!10072-101I9;0.416232!10199-103F1;0.188233!10200-103F2;0.206231!10697-109G4;0.762603!10723-110A3;0.0592174!10179-103C8;0.00976892!10160-103A7;0.515518!10180-103C9;0.63503!10162-103A9;0.866808!10021-101D3;0.799432!10840-111E3;0.0344287!10706-109H4;0.0724478!10033-101E6;0.0562134!10032-101E5;0.648575!10490-107B4;0.362182!10439-106E7;0.0142173!10022-101D4;0.0311328!10176-103C5;0.102011!10469-106I1;0.333432!10067-101I4;0.0150905!10411-106B6;0.676344!10471-106I3;0.0278592!10030-101E3;0.0263451!10475-106I7;0.588782!10787-110H4;0.0134998!10477-106I9;0.0245703!10695-109G2;0.0260079!11771-123I7;0.0973084!11772-123I8;0.0337043!11773-123I9;0.0262419!10093-102C3;0.0298884!10442-106F1;0.147732!10442-106F1;0.0490764!10201-103F3;0.0583817!10639-108I9;0.449578!11843-124H7;0.0224482!11841-124H5;0.00920603!10693-109F9;0.0134801!10436-106E4;0.00588408!10483-107A6;0.0195911!10282-104F3;0.0311005!10023-101D5;0.163144!10066-101I3;0.735771!10065-101I2;0.477321!10800-110I8;0.395133!10610-108F7;0.00994583!10841-111E4;0.0387713!10541-107H1;0.0220889!10842-111E5;0.0164801!10562-108A4;0.01014!10024-101D6;0.0540376!10064-101I1;0.00892135!10609-108F6;0.118789!10048-101G3;0.0207508!10781-110G7;0.804008!10181-103D1;0.0275514!10159-103A6;0.96341!10056-101H2;0.482732!10737-110B8;0.114608!10025-101D7;0.0730151!10044-101F8;0.00862007!10424-106D1;0.0080968!10463-106H4;0.166191!10616-108G4;0.00874539!10486-107A9;0.0572134!10062-101H8;0.0947049!10202-103F4;0.809444!10158-103A5;0.036072!10441-106E9;0.503712!10031-101E4;0.0359792!10063-101H9;0.390333!10063-101H9;0.143744!11763-123H8;0.0108287!11765-123I1;0.146254!11768-123I4;0.273699!10807-111A6;0.272359!10790-110H7;0.0146871!10798-110I6;0.0189197!10786-110H3;0.00696385!10591-108D6;0.0143206!10593-108D8;0.0210428!10590-108D5;0.0148551!10026-101D8;0.0234975!10096-102C6;0.131258!10168-103B6;0.00277046!10154-103A1;0.526305!10209-103G2;0.973376!10061-101H7;0.193269!10027-101D9;0.477274!10043-101F7;0.0152746!10783-110G9;0.0078514!10028-101E1;0.0305789!10060-101H6;0.367374!10203-103F5;0.612776!10059-101H5;0.824248!10047-101G2;0.289065!10029-101E2;0.00831351!10058-101H4;0.0316594!10418-106C4;0.53209!10492-107B6;0.0415312!10694-109G1;0.0216841!10797-110I5;0.0225105!10057-101H3;0.0518661!10100-102D1;0.0414789!10055-101H1;0.189282!10204-103F6;0.25978!10191-103E2;0.112251!10563-108A5;0.0130028
|name=motif585
|name=motif585
|tomtom_result=AZF1#MA0277.1;2;0.000153478;0.0730557;0.146111;7;AAAGAAA;AAAAAGAAA;+!Klf4#MA0039.1;1;0.000773814;0.368335;0.368335;7;AAAGAAA;TAAAGGAAGG;+!RME1#MA0370.1;3;0.00153534;0.730822;0.47288;7;AAAGAAA;TCCAAAGGAA;+!SPIB#MA0081.1;0;0.00198689;0.94576;0.47288;7;AAAGAAA;AGAGGAA;+!id1#MA0120.1;4;0.00592119;2.81848;1;7;AAAGAAA;CGAAAAGGAAAA;-!Trl#MA0205.1;3;0.00904205;4.30401;1;7;AAAGAAA;GAGAGAGCAA;-!STAT1#MA0137.1;4;0.00980004;4.66482;1;7;AAAGAAA;GGAAAACGAAACTG;+!FOXA1#MA0148.1;1;0.012485;5.94284;1;7;AAAGAAA;CAAAGTAAACA;-!IRF1#MA0050.1;3;0.0174537;8.30794;1;7;AAAGAAA;GAAAGCGAAACC;+!SPI1#MA0080.2;-2;0.0200294;9.53401;1;5;AAAGAAA;AGGAAGT;+!squamosa#MA0082.1;6;0.0206783;9.84288;1;7;AAAGAAA;CCAAAAATGGAAAT;+
}}
}}

Latest revision as of 12:29, 7 September 2012

Full Name: motif585

Motif matrix
POACGT
01122209000
025271623068387907635
03122209000
04001222090
057142415204355810
06122209000
07122209000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
AZF1#MA0277.120.0001534780.07305570.1461117AAAGAAAAAAAAGAAA+
Klf4#MA0039.110.0007738140.3683350.3683357AAAGAAATAAAGGAAGG+
RME1#MA0370.130.001535340.7308220.472887AAAGAAATCCAAAGGAA+
SPIB#MA0081.100.001986890.945760.472887AAAGAAAAGAGGAA+
id1#MA0120.140.005921192.8184817AAAGAAACGAAAAGGAAAA-
Trl#MA0205.130.009042054.3040117AAAGAAAGAGAGAGCAA-
STAT1#MA0137.140.009800044.6648217AAAGAAAGGAAAACGAAACTG+
FOXA1#MA0148.110.0124855.9428417AAAGAAACAAAGTAAACA-
IRF1#MA0050.130.01745378.3079417AAAGAAAGAAAGCGAAACC+
SPI1#MA0080.2-20.02002949.5340115AAAGAAAAGGAAGT+
squamosa#MA0082.160.02067839.8428817AAAGAAACCAAAAATGGAAAT+
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