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MacroAPE 1083:Motif GTNACT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;1616;0!02;0;0;0;1616!03;404;404;404;404!04;1616;0;0;0!05;0;1616;0;0!06;0;0;0;1616 |macroape_1083_sample_pvalues=11376-118A8;0.0515726!...")
 
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129A2;0.0270176!12181-129A3;0.0317003!12176-128I7;0.0294734!12177-128I8;0.0552466!12182-129A4;0.0253693!12183-129A5;0.0216515!12184-129A6;0.02569!10809-111A8;0.0842366!10597-108E3;0.133253!10717-109I6;0.487995!10455-106G5;0.807205!10534-107G3;0.999395!10429-106D6;0.581093!10464-106H5;0.533914!10827-111C8;0.15885!10789-110H6;0.303759!10828-111C9;0.902417!10788-110H5;0.499152!10792-110H9;0.572982!10765-110E9;0.595443!10829-111D1;0.945951!10830-111D2;0.752408!10831-111D3;0.913576!10832-111D4;0.897423!10833-111D5;0.842508!10764-110E8;0.763105!10770-110F5;0.950078!10399-106A3;0.992718!10400-106A4;0.870545!10405-106A9;0.829174!10834-111D6;0.987611!10835-111D7;0.764026!10836-111D8;0.860068!10837-111D9;0.893915!10699-109G6;0.700333!10802-111A1;0.921525!10796-110I4;0.899545!10010-101C1;0.912003!10810-111A9;0.649005!10421-106C7;0.0586424!10708-109H6;0.663611!12235-129G3;0.491649!12236-129G4;0.108604!12237-129G5;0.257853!10167-103B5;0.156107!10151-102I7;0.608081!10428-106D5;0.66115!10795-110I3;0.750777!10805-111A4;0.689131!10052-101G7;0.253325!10189-103D9;0.862301!10589-108D4;0.794125!10425-106D2;0.587784!10427-106D4;0.471037!10702-109G9;0.284681!10432-106D9;0.308106!10496-107C1;0.956758!10718-109I7;0.152888!10011-101C2;0.969446!10053-101G8;0.933004!10686-109F2;0.142287!10084-102B3;0.0801514!10012-101C3;0.276425!10085-102B4;0.567018!10482-107A5;0.174186!10419-106C5;0.646512!10080-102A8;0.90779!10760-110E4;0.859735!10709-109H7;0.598548!10710-109H8;0.99048!10703-109H1;0.891741!10719-109I8;0.229099!10642-109A3;0.223359!10177-103C6;0.0578649!10164-103B2;0.455074!10173-103C2;0.38385!10166-103B4;0.631605!10083-102B2;0.800371!10188-103D8;0.605671!10552-107I3;0.622831!10553-107I4;0.90197!10013-101C4;0.42825!10536-107G5;0.621235!10618-108G6;0.322206!10423-106C9;0.989786!10785-110H2;0.664274!12238-129G6;0.878131!12239-129G7;0.0512031!12240-129G8;0.0672093!10416-106C2;0.143825!10801-110I9;0.208916!10766-110F1;0.875345!10824-111C5;0.879223!10825-111C6;0.775298!10826-111C7;0.835523!10454-106G4;0.914807!10409-106B4;0.745208!10638-108I8;0.950402!10636-108I6;0.811353!10513-107D9;0.986894!10420-106C6;0.770583!10082-102B1;0.46304!10014-101C5;0.27115!10070-101I7;0.955593!10452-106G2;0.401366!10453-106G3;0.478037!10449-106F8;0.902757!10042-101F6;0.976658!10069-101I6;0.648801!10193-103E4;0.969769!10631-108I1;0.411048!10438-106E6;0.472578!10488-107B2;0.843828!10196-103E7;0.866831!10071-101I8;0.781897!10071-101I8;0.154561!10041-101F5;0.233171!10451-106G1;0.737136!10450-106F9;0.872493!10604-108F1;0.415213!10605-108F2;0.853918!10606-108F3;0.94779!10603-108E9;0.898156!10497-107C2;0.411184!10448-106F7;0.585705!10643-109A4;0.290644!10426-106D3;0.899296!10431-106D8;0.992941!10197-103E8;0.966406!10443-106F2;0.931199!10815-111B5;0.884164!10816-111B6;0.679235!10817-111B7;0.921773!10015-101C6;0.79577!10410-106B5;0.849803!10054-101G9;0.603072!10758-110E2;0.591072!10711-109H9;0.594393!10040-101F4;0.516075!10470-106I2;0.538046!10415-106C1;0.887055!10198-103E9;0.958495!10614-108G2;0.993512!10612-108F9;0.890321!10549-107H9;0.543083!10615-108G3;0.214726!10487-107B1;0.808103!10433-106E1;0.170173!10688-109F4;0.539121!10444-106F3;0.851891!10444-106F3;0.36584!10485-107A8;0.392174!10413-106B8;0.133561!10175-103C4;0.402801!10161-103A8;0.562666!12131-128D7;0.673573!10624-108H3;0.0614542!10712-109I1;0.00840668!10205-103F7;0.514842!10206-103F8;0.855935!10207-103F9;0.984596!10050-101G5;0.326344!10051-101G6;0.874141!10016-101C7;0.87319!10046-101G1;0.766758!10778-110G4;0.966094!10633-108I3;0.511335!10818-111B8;0.495282!10819-111B9;0.666487!10820-111C1;0.706532!10484-107A7;0.68253!10808-111A7;0.330187!10169-103B7;0.590525!10153-102I9;0.614075!13425-144D5;0.619269!13433-144E4;0.248153!13437-144E8;0.216322!11904-125F5;0.200152!11905-125F6;0.000297501!10039-101F3;4.26344e-07!10791-110H8;0.566519!10017-101C8;0.798738!10045-101F9;0.594307!10509-107D5;0.999507!10839-111E2;0.587512!10692-109F8;0.880382!10079-102A7;0.4746!10078-102A6;0.988601!10721-110A1;0.995502!10569-108B2;0.0715655!10570-108B3;0.75911!10571-108B4;0.65893!10647-109A8;0.286398!10752-110D5;0.298457!10782-110G8;0.632733!10726-110A6;0.136024!10018-101C9;0.350919!10086-102B5;0.770924!10182-103D2;0.0858517!10165-103B3;0.675748!10499-107C4;0.609563!10408-106B3;0.89703!10019-101D1;0.919612!10068-101I5;0.627953!10075-102A3;0.807811!10077-102A5;0.636105!10727-110A7;0.737844!10775-110G1;0.676345!10412-106B7;0.500963!12231-129F8;0.694702!12232-129F9;0.00344548!12233-129G1;0.0166289!12234-129G2;0.00820376!10414-106B9;0.000849061!10170-103B8;0.754869!10183-103D3;0.577015!10150-102I6;0.548528!10174-103C3;0.664707!10155-103A2;0.796548!10038-101F2;0.773402!10838-111E1;0.66949!10759-110E3;0.367877!10514-107E1;0.349878!10465-106H6;0.125491!10691-109F7;0.530443!10843-111E6;0.710183!10844-111E7;0.223356!11747-123G1;0.281566!11748-123G2;0.0462912!11749-123G3;0.32712!11750-123G4;0.555389!11751-123G5;0.780976!11840-124H4;0.673376!11752-123G6;0.599376!11753-123G7;0.523452!11754-123G8;0.723113!11755-123G9;0.202042!11756-123H1;0.249477!11833-124G6;0.267394!11760-123H5;0.635955!11836-124G9;0.158469!11758-123H3;0.199652!11835-124G8;0.432382!11762-123H7;0.433309!11838-124H2;0.877949!11757-123H2;0.710974!11759-123H4;0.210629!11761-123H6;0.363761!11842-124H6;0.883401!11837-124H1;0.98495!10568-108B1;0.652082!13230-141I8;0.356941!13231-141I9;0.304094!10696-109G3;0.238016!10493-107B7;0.293375!10494-107B8;0.781635!10850-111F4;0.358148!10851-111F5;0.166627!10852-111F6;0.127712!10853-111F7;0.244313!10854-111F8;0.398599!10855-111F9;0.242501!10856-111G1;0.00662306!10847-111F1;0.464723!10846-111E9;0.0890349!10848-111F2;0.338511!10845-111E8;0.334331!10857-111G2;0.883778!10858-111G3;0.174692!10156-103A3;0.691278!11901-125F2;0.594784!11902-125F3;0.0145837!11903-125F4;0.0161227!10689-109F5;0.04052!10648-109A9;0.206376!10784-110H1;0.51102!10744-110C6;0.712572!10772-110F7;0.321144!10474-106I6;0.86856!10600-108E6;0.0236091!10684-109E9;0.327923!12226-129F3;0.684149!12227-129F4;0.507004!10508-107D4;0.126002!10539-107G8;0.12713!10607-108F4;0.204227!10555-107I6;0.152891!10774-110F9;0.122012!10637-108I7;0.0893265!10663-109C6;0.0670254!10728-110A8;0.0527923!10729-110A9;0.166911!10430-106D7;0.0383269!10730-110B1;0.64799!10813-111B3;0.107218!10812-111B2;0.0983018!10037-101F1;0.465861!10172-103C1;0.493995!10163-103B1;0.514083!10076-102A4;0.769553!10073-102A1;0.463397!10036-101E9;0.145205!10195-103E6;0.532598!10277-104E7;0.552737!10434-106E2;0.845429!10550-107I1;0.701488!10545-107H5;0.856419!10544-107H4;0.984073!10704-109H2;0.609223!10510-107D6;0.458127!10558-107I9;0.562173!10020-101D2;0.09838!10732-110B3;0.632378!10049-101G4;0.430453!10698-109G5;0.905167!10437-106E5;0.700455!10417-106C3;0.649283!10035-101E8;0.337703!10171-103B9;0.530456!10157-103A4;0.615644!10034-101E7;0.659688!10072-101I9;0.565737!10199-103F1;0.148483!10200-103F2;0.493041!10697-109G4;0.852153!10723-110A3;0.458514!10179-103C8;0.866538!10160-103A7;0.822231!10180-103C9;0.442452!10162-103A9;0.714054!10021-101D3;0.665553!10840-111E3;0.85154!10706-109H4;0.414532!10033-101E6;0.269699!10032-101E5;0.652556!10490-107B4;0.509686!10439-106E7;0.774726!10022-101D4;0.748405!10176-103C5;0.616145!10469-106I1;0.424312!10067-101I4;0.81301!10411-106B6;0.00907978!10471-106I3;0.890804!10030-101E3;0.372005!10475-106I7;0.649155!10787-110H4;0.180229!10477-106I9;0.376572!10695-109G2;0.090698!11771-123I7;0.602864!11772-123I8;0.522994!11773-123I9;0.521367!10093-102C3;0.0714824!10442-106F1;0.475421!10442-106F1;0.73237!10201-103F3;0.61145!10639-108I9;0.421285!11843-124H7;0.882656!11841-124H5;0.827267!10693-109F9;0.529619!10436-106E4;0.371024!10483-107A6;0.81673!10282-104F3;0.33812!10023-101D5;0.259854!10066-101I3;0.518224!10065-101I2;0.505119!10800-110I8;0.613774!10610-108F7;0.325608!10841-111E4;0.16561!10541-107H1;0.139366!10842-111E5;0.611172!10562-108A4;0.208423!10024-101D6;0.258766!10064-101I1;0.759824!10609-108F6;0.0702689!10048-101G3;0.545348!10781-110G7;0.91939!10181-103D1;0.726078!10159-103A6;0.563901!10056-101H2;0.807513!10737-110B8;0.196865!10025-101D7;0.04425!10044-101F8;0.72915!10424-106D1;0.733491!10463-106H4;0.237874!10616-108G4;0.730273!10486-107A9;0.320845!10062-101H8;0.120472!10202-103F4;0.967005!10158-103A5;0.852668!10441-106E9;0.969313!10031-101E4;0.161561!10063-101H9;0.553557!10063-101H9;0.168907!11763-123H8;0.343478!11765-123I1;0.172761!11768-123I4;0.27484!10807-111A6;0.084426!10790-110H7;0.16531!10798-110I6;0.233829!10786-110H3;0.389304!10591-108D6;0.471059!10593-108D8;0.55809!10590-108D5;0.685421!10026-101D8;0.492063!10096-102C6;0.927966!10168-103B6;0.757658!10154-103A1;0.575578!10209-103G2;0.6379!10061-101H7;0.961222!10027-101D9;0.46138!10043-101F7;0.89399!10783-110G9;0.817279!10028-101E1;0.277895!10060-101H6;0.795259!10203-103F5;0.808301!10059-101H5;0.808232!10047-101G2;0.818414!10029-101E2;0.733103!10058-101H4;0.944439!10418-106C4;0.512565!10492-107B6;0.760408!10694-109G1;0.943562!10797-110I5;0.128097!10057-101H3;0.416638!10100-102D1;0.44077!10055-101H1;0.671106!10204-103F6;0.0725332!10191-103E2;0.870117!10563-108A5;0.982003
|name=motif_GTNACT
|name=motif_GTNACT
|tomtom_result=ARG81#MA0272.1;0;0.00359681;1.71208;1;6;GTAACT;GTGACTCT;+!ovo#MA0126.1;3;0.00694151;3.30416;1;6;GTAACT;ACTGTTACT;-!prd#MA0239.1;3;0.00694151;3.30416;1;6;GTAACT;ACTGTTACT;-!Fos#MA0099.1;0;0.011119;5.29265;1;6;GTAACT;GTGAGTCA;+!Pax2#MA0067.1;2;0.0131884;6.27766;1;6;GTAACT;GCGTGACT;-!NFE2L2#MA0150.1;0;0.0172028;8.18855;1;6;GTAACT;ATGACTCAGCA;+
}}
}}

Latest revision as of 12:41, 7 September 2012

Full Name: motif_GTNACT

Motif matrix
POACGT
010016160
020001616
03404404404404
041616000
050161600
060001616

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ARG81#MA0272.100.003596811.7120816GTAACTGTGACTCT+
ovo#MA0126.130.006941513.3041616GTAACTACTGTTACT-
prd#MA0239.130.006941513.3041616GTAACTACTGTTACT-
Fos#MA0099.100.0111195.2926516GTAACTGTGAGTCA+
Pax2#MA0067.120.01318846.2776616GTAACTGCGTGACT-
NFE2L2#MA0150.100.01720288.1885516GTAACTATGACTCAGCA+
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