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MacroAPE 1083:Motif667: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;99511;9537;33687;14782!02;5621;965;147852;3079!03;8923;3306;139085;6203!04;9892;13683;125621;8321!05;0;157517;0;0!06;145142;1688;4488;6199!...")
 
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7-111C8;0.187575!10789-110H6;0.685185!10828-111C9;0.419767!10788-110H5;0.486502!10792-110H9;0.203582!10765-110E9;0.415052!10829-111D1;0.37134!10830-111D2;0.433289!10831-111D3;0.0614209!10832-111D4;0.338036!10833-111D5;0.417463!10764-110E8;0.435764!10770-110F5;0.397562!10399-106A3;0.694352!10400-106A4;0.31473!10405-106A9;0.350132!10834-111D6;0.283932!10835-111D7;0.585022!10836-111D8;0.275144!10837-111D9;0.244771!10699-109G6;0.294639!10802-111A1;0.215777!10796-110I4;0.39011!10010-101C1;0.833534!10810-111A9;0.0689957!10421-106C7;0.110573!10708-109H6;0.789023!12235-129G3;0.0688047!12236-129G4;0.00985325!12237-129G5;0.0718086!10167-103B5;0.0690685!10151-102I7;0.68058!10428-106D5;0.669885!10795-110I3;0.0718061!10805-111A4;0.422744!10052-101G7;0.203117!10189-103D9;0.253614!10589-108D4;0.106411!10425-106D2;0.154831!10427-106D4;0.165762!10702-109G9;0.411232!10432-106D9;0.228293!10496-107C1;0.790517!10718-109I7;0.704347!10011-101C2;0.480749!10053-101G8;0.169159!10686-109F2;0.459721!10084-102B3;0.94748!10012-101C3;0.700203!10085-102B4;0.86174!10482-107A5;0.230524!10419-106C5;0.288469!10080-102A8;0.23578!10760-110E4;0.227454!10709-109H7;0.616596!10710-109H8;0.392984!10703-109H1;0.538567!10719-109I8;0.0415177!10642-109A3;0.0139887!10177-103C6;0.0486297!10164-103B2;0.719408!10173-103C2;0.57804!10166-103B4;0.371737!10083-102B2;0.31692!10188-103D8;0.262606!10552-107I3;0.926682!10553-107I4;0.484835!10013-101C4;0.415211!10536-107G5;0.269796!10618-108G6;0.345182!10423-106C9;0.386074!10785-110H2;0.567128!12238-129G6;0.579452!12239-129G7;0.0291487!12240-129G8;0.0805865!10416-106C2;0.0664318!10801-110I9;0.412573!10766-110F1;0.487578!10824-111C5;0.408209!10825-111C6;0.287252!10826-111C7;0.30034!10454-106G4;0.317654!10409-106B4;0.272359!10638-108I8;0.390443!10636-108I6;0.254916!10513-107D9;0.549501!10420-106C6;0.497795!10082-102B1;0.0990554!10014-101C5;0.059448!10070-101I7;0.0509768!10452-106G2;0.173928!10453-106G3;0.0703408!10449-106F8;0.114902!10042-101F6;0.126911!10069-101I6;0.810095!10193-103E4;0.135188!10631-108I1;0.708798!10438-106E6;0.281037!10488-107B2;0.566069!10196-103E7;0.27517!10071-101I8;0.135131!10071-101I8;0.276039!10041-101F5;0.361992!10451-106G1;0.348328!10450-106F9;0.173842!10604-108F1;0.126032!10605-108F2;0.174826!10606-108F3;0.233821!10603-108E9;0.200657!10497-107C2;0.180349!10448-106F7;0.678699!10643-109A4;0.330007!10426-106D3;0.902941!10431-106D8;0.869287!10197-103E8;0.511226!10443-106F2;0.102842!10815-111B5;0.640354!10816-111B6;0.536529!10817-111B7;0.414646!10015-101C6;0.52448!10410-106B5;0.051806!10054-101G9;0.0618098!10758-110E2;0.14637!10711-109H9;0.330253!10040-101F4;0.238615!10470-106I2;0.613324!10415-106C1;0.455422!10198-103E9;0.744993!10614-108G2;0.115815!10612-108F9;0.478401!10549-107H9;0.572471!10615-108G3;0.0961072!10487-107B1;0.00895058!10433-106E1;0.837768!10688-109F4;0.197801!10444-106F3;0.877899!10444-106F3;0.71049!10485-107A8;0.765889!10413-106B8;0.212767!10175-103C4;0.378831!10161-103A8;0.634708!12131-128D7;0.870497!10624-108H3;0.113092!10712-109I1;0.289396!10205-103F7;0.726251!10206-103F8;0.132481!10207-103F9;0.0834116!10050-101G5;0.0741316!10051-101G6;0.00935431!10016-101C7;0.0325257!10046-101G1;0.0226088!10778-110G4;0.076544!10633-108I3;0.50648!10818-111B8;0.28531!10819-111B9;0.586354!10820-111C1;0.557732!10484-107A7;0.570295!10808-111A7;0.252311!10169-103B7;0.447302!10153-102I9;0.649681!13425-144D5;0.759391!13433-144E4;0.355021!13437-144E8;0.406357!11904-125F5;0.482276!11905-125F6;0.241151!10039-101F3;0.29576!10791-110H8;0.71801!10017-101C8;0.66083!10045-101F9;0.0278043!10509-107D5;0.222377!10839-111E2;0.0823782!10692-109F8;0.271443!10079-102A7;0.433927!10078-102A6;0.101125!10721-110A1;0.0256203!10569-108B2;0.277014!10570-108B3;0.236245!10571-108B4;0.056114!10647-109A8;0.290005!10752-110D5;0.171369!10782-110G8;0.323502!10726-110A6;0.0199466!10018-101C9;0.0665521!10086-102B5;0.1244!10182-103D2;0.0814608!10165-103B3;0.834724!10499-107C4;0.883287!10408-106B3;0.170108!10019-101D1;0.85714!10068-101I5;0.113574!10075-102A3;0.212231!10077-102A5;0.129962!10727-110A7;0.211755!10775-110G1;0.524152!10412-106B7;0.339164!12231-129F8;0.66657!12232-129F9;0.60025!12233-129G1;0.236331!12234-129G2;0.18616!10414-106B9;0.458908!10170-103B8;0.180131!10183-103D3;0.504275!10150-102I6;0.635309!10174-103C3;0.662756!10155-103A2;0.741615!10038-101F2;0.758883!10838-111E1;0.68422!10759-110E3;0.0905614!10514-107E1;0.431781!10465-106H6;0.0567771!10691-109F7;0.0916545!10843-111E6;0.979391!10844-111E7;0.0354145!11747-123G1;0.0250491!11748-123G2;0.822047!11749-123G3;0.773421!11750-123G4;0.656099!11751-123G5;0.866892!11840-124H4;0.693838!11752-123G6;0.472786!11753-123G7;0.354831!11754-123G8;0.592061!11755-123G9;0.773272!11756-123H1;0.252565!11833-124G6;0.521499!11760-123H5;0.874245!11836-124G9;0.365199!11758-123H3;0.832133!11835-124G8;0.231649!11762-123H7;0.179386!11838-124H2;0.240138!11757-123H2;0.0917095!11759-123H4;0.35952!11761-123H6;0.53139!11842-124H6;0.85798!11837-124H1;0.892199!10568-108B1;0.191668!13230-141I8;0.0559516!13231-141I9;0.548429!10696-109G3;0.526813!10493-107B7;0.842837!10494-107B8;0.561937!10850-111F4;0.80713!10851-111F5;0.937216!10852-111F6;0.916435!10853-111F7;0.727433!10854-111F8;0.442332!10855-111F9;0.75305!10856-111G1;0.041076!10847-111F1;0.880025!10846-111E9;0.478933!10848-111F2;0.836668!10845-111E8;0.777927!10857-111G2;0.479324!10858-111G3;0.857303!10156-103A3;0.982114!11901-125F2;0.687855!11902-125F3;0.258507!11903-125F4;0.217759!10689-109F5;0.160221!10648-109A9;0.420996!10784-110H1;0.416868!10744-110C6;0.492069!10772-110F7;0.260381!10474-106I6;0.320961!10600-108E6;0.904128!10684-109E9;0.392944!12226-129F3;0.0402394!12227-129F4;0.531788!10508-107D4;0.216512!10539-107G8;0.0244908!10607-108F4;0.168973!10555-107I6;0.0114417!10774-110F9;0.0902923!10637-108I7;0.0799916!10663-109C6;0.00077063!10728-110A8;0.00615847!10729-110A9;0.031034!10430-106D7;0.486819!10730-110B1;0.160105!10813-111B3;0.0302806!10812-111B2;0.799489!10037-101F1;0.124436!10172-103C1;0.720264!10163-103B1;0.456297!10076-102A4;0.685481!10073-102A1;0.563673!10036-101E9;0.146644!10195-103E6;0.739999!10277-104E7;0.730386!10434-106E2;0.791531!10550-107I1;0.612649!10545-107H5;0.387577!10544-107H4;0.899571!10704-109H2;0.725726!10510-107D6;0.723066!10558-107I9;0.112732!10020-101D2;0.131329!10732-110B3;0.475552!10049-101G4;0.215901!10698-109G5;0.145987!10437-106E5;0.351034!10417-106C3;0.589019!10035-101E8;0.844946!10171-103B9;0.643226!10157-103A4;0.497655!10034-101E7;0.649978!10072-101I9;0.66694!10199-103F1;0.156213!10200-103F2;0.0502315!10697-109G4;0.0629126!10723-110A3;0.000567179!10179-103C8;0.939851!10160-103A7;0.967334!10180-103C9;0.679207!10162-103A9;0.94882!10021-101D3;0.717259!10840-111E3;0.0809526!10706-109H4;0.274134!10033-101E6;0.688467!10032-101E5;0.88138!10490-107B4;0.721313!10439-106E7;0.256292!10022-101D4;0.460893!10176-103C5;0.184795!10469-106I1;0.471243!10067-101I4;0.523103!10411-106B6;0.496738!10471-106I3;0.580015!10030-101E3;0.361778!10475-106I7;0.3315!10787-110H4;0.0464108!10477-106I9;0.165687!10695-109G2;0.170291!11771-123I7;0.964629!11772-123I8;0.731961!11773-123I9;0.479464!10093-102C3;0.890358!10442-106F1;0.0734356!10442-106F1;0.156242!10201-103F3;0.152966!10639-108I9;0.197982!11843-124H7;0.582814!11841-124H5;0.354757!10693-109F9;0.223978!10436-106E4;0.931123!10483-107A6;0.961981!10282-104F3;0.870018!10023-101D5;0.0265882!10066-101I3;0.0354923!10065-101I2;0.156769!10800-110I8;0.153173!10610-108F7;0.0394973!10841-111E4;0.0463049!10541-107H1;0.0729849!10842-111E5;0.11608!10562-108A4;0.0894374!10024-101D6;0.0928016!10064-101I1;0.0235673!10609-108F6;0.0871253!10048-101G3;0.185603!10781-110G7;0.417373!10181-103D1;0.126691!10159-103A6;0.970973!10056-101H2;0.926873!10737-110B8;0.684204!10025-101D7;0.970365!10044-101F8;0.0613445!10424-106D1;0.107238!10463-106H4;0.399182!10616-108G4;0.665586!10486-107A9;0.630349!10062-101H8;0.575358!10202-103F4;0.110311!10158-103A5;0.0532418!10441-106E9;0.836283!10031-101E4;0.0447804!10063-101H9;0.855289!10063-101H9;0.200785!11763-123H8;0.16474!11765-123I1;0.482696!11768-123I4;0.420534!10807-111A6;0.266962!10790-110H7;0.194554!10798-110I6;0.117002!10786-110H3;0.301005!10591-108D6;0.317922!10593-108D8;0.243817!10590-108D5;0.246536!10026-101D8;0.312961!10096-102C6;0.250491!10168-103B6;0.0598825!10154-103A1;0.844231!10209-103G2;0.858034!10061-101H7;0.0482595!10027-101D9;0.147815!10043-101F7;0.231635!10783-110G9;0.331532!10028-101E1;0.482796!10060-101H6;0.0533324!10203-103F5;0.239173!10059-101H5;0.0335928!10047-101G2;0.0484482!10029-101E2;0.0290968!10058-101H4;0.0373024!10418-106C4;0.107008!10492-107B6;0.404097!10694-109G1;0.194544!10797-110I5;0.425336!10057-101H3;0.178512!10100-102D1;0.0700305!10055-101H1;0.362309!10204-103F6;0.396767!10191-103E2;0.340811!10563-108A5;0.0771983
|name=motif667
|name=motif667
|tomtom_result=PPARG::RXRA#MA0065.2;2;0.00193632;0.921688;1;7;AGGGCAG;GTAGGGCAAAGGTCA;+!ESR1#MA0112.2;0;0.00242591;1.15473;1;7;AGGGCAG;AGGTCAGGGTGACCTGGGCC;-!kni#MA0451.1;5;0.00397313;1.89121;1;7;AGGGCAG;AAACTAGAGCAC;+!abi4#MA0123.1;1;0.00630982;3.00347;1;7;AGGGCAG;GGGGGCACCG;-!SP1#MA0079.1;0;0.00752236;3.58064;1;7;AGGGCAG;GGGGCGGGGT;+!ESR2#MA0258.1;1;0.0134057;6.3811;1;7;AGGGCAG;CAGGTCACCGTGACCTTG;-!HNF4A#MA0114.1;0;0.0154871;7.37186;1;7;AGGGCAG;AGGCCAAAGGTCA;+!btd#MA0443.1;2;0.0165849;7.89441;1;7;AGGGCAG;AGGGGGCGGA;+!SPI1#MA0080.1;-1;0.0169884;8.08649;1;6;AGGGCAG;CGGAAG;+!NR4A2#MA0160.1;1;0.0174585;8.31027;1;7;AGGGCAG;AAGGTCAC;+!CTCF#MA0139.1;10;0.0197892;9.41968;1;7;AGGGCAG;TGGCCACCAGGGGGCGCTA;+!SKN7#MA0381.1;-1;0.0198582;9.45251;1;6;AGGGCAG;GGCCAT;+
}}
}}

Latest revision as of 12:56, 7 September 2012

Full Name: motif667

Motif matrix
POACGT
019951195373368714782
0256219651478523079
03892333061390856203
049892136831256218321
05015751700
06145142168844886199
07223917511520051522

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
PPARG::RXRA#MA0065.220.001936320.92168817AGGGCAGGTAGGGCAAAGGTCA+
ESR1#MA0112.200.002425911.1547317AGGGCAGAGGTCAGGGTGACCTGGGCC-
kni#MA0451.150.003973131.8912117AGGGCAGAAACTAGAGCAC+
abi4#MA0123.110.006309823.0034717AGGGCAGGGGGGCACCG-
SP1#MA0079.100.007522363.5806417AGGGCAGGGGGCGGGGT+
ESR2#MA0258.110.01340576.381117AGGGCAGCAGGTCACCGTGACCTTG-
HNF4A#MA0114.100.01548717.3718617AGGGCAGAGGCCAAAGGTCA+
btd#MA0443.120.01658497.8944117AGGGCAGAGGGGGCGGA+
SPI1#MA0080.1-10.01698848.0864916AGGGCAGCGGAAG+
NR4A2#MA0160.110.01745858.3102717AGGGCAGAAGGTCAC+
CTCF#MA0139.1100.01978929.4196817AGGGCAGTGGCCACCAGGGGGCGCTA+
SKN7#MA0381.1-10.01985829.4525116AGGGCAGGGCCAT+
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