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MacroAPE 1083:CNhs12043 bu f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;223.99482677798483;521.2336186134161;335.9564193213183;32.21224977269232!2;321.63806282327073;400.7225529260366;59.09860644956397;331.937892...")
 
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;0.278941!10455-106G5;0.710707!10534-107G3;0.0452281!10429-106D6;0.0904175!10464-106H5;0.246041!10827-111C8;0.0371496!10789-110H6;0.0799955!10828-111C9;0.0617208!10788-110H5;0.0169357!10792-110H9;0.0075433!10765-110E9;0.0150763!10829-111D1;0.0138814!10830-111D2;0.00914613!10831-111D3;0.0506804!10832-111D4;0.171864!10833-111D5;0.010205!10764-110E8;0.0050727!10770-110F5;0.00177725!10399-106A3;0.0160473!10400-106A4;0.00931396!10405-106A9;0.010054!10834-111D6;0.016846!10835-111D7;0.0132481!10836-111D8;0.106077!10837-111D9;0.167279!10699-109G6;0.0680227!10802-111A1;0.386121!10796-110I4;0.0510912!10010-101C1;0.495939!10810-111A9;0.0806009!10421-106C7;0.229463!10708-109H6;0.0589081!12235-129G3;0.445924!12236-129G4;0.788953!12237-129G5;0.0834483!10167-103B5;0.582285!10151-102I7;0.425081!10428-106D5;0.209618!10795-110I3;0.801161!10805-111A4;0.0185296!10052-101G7;0.462027!10189-103D9;0.000541285!10589-108D4;0.00957151!10425-106D2;0.674974!10427-106D4;0.89178!10702-109G9;0.0603628!10432-106D9;0.291817!10496-107C1;0.923842!10718-109I7;0.508644!10011-101C2;0.0190806!10053-101G8;0.00180217!10686-109F2;0.170228!10084-102B3;0.00241357!10012-101C3;0.215134!10085-102B4;0.276908!10482-107A5;0.219801!10419-106C5;0.572063!10080-102A8;0.644537!10760-110E4;0.012566!10709-109H7;0.878859!10710-109H8;0.728586!10703-109H1;0.202935!10719-109I8;0.918497!10642-109A3;0.600901!10177-103C6;0.499699!10164-103B2;0.182826!10173-103C2;0.195216!10166-103B4;0.52712!10083-102B2;0.258189!10188-103D8;0.31157!10552-107I3;0.141536!10553-107I4;0.33571!10013-101C4;0.291395!10536-107G5;0.000351326!10618-108G6;0.507012!10423-106C9;0.338478!10785-110H2;0.0534298!12238-129G6;0.143885!12239-129G7;0.526468!12240-129G8;0.335709!10416-106C2;0.542576!10801-110I9;0.0646353!10766-110F1;0.0398273!10824-111C5;0.0631927!10825-111C6;0.33124!10826-111C7;0.344004!10454-106G4;0.358135!10409-106B4;0.231531!10638-108I8;0.0477997!10636-108I6;0.404834!10513-107D9;0.714041!10420-106C6;0.538612!10082-102B1;0.171858!10014-101C5;0.00159549!10070-101I7;0.0294421!10452-106G2;0.00996532!10453-106G3;0.0544137!10449-106F8;0.0355236!10042-101F6;0.0404937!10069-101I6;0.104254!10193-103E4;0.0375305!10631-108I1;0.231002!10438-106E6;0.0148385!10488-107B2;0.561726!10196-103E7;0.181348!10071-101I8;0.00267904!10071-101I8;0.00264744!10041-101F5;0.295502!10451-106G1;0.0352424!10450-106F9;0.232875!10604-108F1;0.519459!10605-108F2;0.954062!10606-108F3;0.474694!10603-108E9;0.959231!10497-107C2;0.882941!10448-106F7;0.635677!10643-109A4;0.495638!10426-106D3;0.138486!10431-106D8;0.425291!10197-103E8;0.956704!10443-106F2;0.0191778!10815-111B5;0.953143!10816-111B6;0.179485!10817-111B7;0.347533!10015-101C6;0.227338!10410-106B5;0.00860233!10054-101G9;0.37318!10758-110E2;0.00771717!10711-109H9;0.700446!10040-101F4;0.520796!10470-106I2;0.300867!10415-106C1;0.956417!10198-103E9;0.270032!10614-108G2;0.00363952!10612-108F9;0.501726!10549-107H9;0.953266!10615-108G3;0.140198!10487-107B1;0.646187!10433-106E1;0.0863635!10688-109F4;0.931784!10444-106F3;0.43234!10444-106F3;0.496933!10485-107A8;0.381241!10413-106B8;0.9429!10175-103C4;0.731693!10161-103A8;0.18855!12131-128D7;0.131159!10624-108H3;0.61779!10712-109I1;0.0428796!10205-103F7;0.0259475!10206-103F8;0.00465207!10207-103F9;0.00793457!10050-101G5;0.00175566!10051-101G6;0.0382587!10016-101C7;0.0732786!10046-101G1;0.0982807!10778-110G4;0.00626673!10633-108I3;0.400102!10818-111B8;0.143777!10819-111B9;0.394129!10820-111C1;0.418907!10484-107A7;0.421383!10808-111A7;0.697304!10169-103B7;0.0752156!10153-102I9;0.308425!13425-144D5;0.156554!13433-144E4;0.488001!13437-144E8;0.533408!11904-125F5;0.412985!11905-125F6;0.179314!10039-101F3;0.93965!10791-110H8;0.267931!10017-101C8;0.391582!10045-101F9;0.0806338!10509-107D5;0.0158762!10839-111E2;0.810061!10692-109F8;0.226159!10079-102A7;0.409486!10078-102A6;0.0667986!10721-110A1;0.235594!10569-108B2;0.286472!10570-108B3;0.869384!10571-108B4;0.947891!10647-109A8;0.743353!10752-110D5;0.447885!10782-110G8;0.0496779!10726-110A6;0.301966!10018-101C9;0.420438!10086-102B5;0.412731!10182-103D2;0.398102!10165-103B3;0.216141!10499-107C4;0.184919!10408-106B3;0.364904!10019-101D1;0.34069!10068-101I5;0.00651982!10075-102A3;0.000377534!10077-102A5;0.00189099!10727-110A7;0.973311!10775-110G1;0.00160066!10412-106B7;0.0198022!12231-129F8;0.336987!12232-129F9;0.378411!12233-129G1;0.208834!12234-129G2;0.561109!10414-106B9;0.760299!10170-103B8;0.319024!10183-103D3;0.492914!10150-102I6;0.366488!10174-103C3;0.221425!10155-103A2;0.124994!10038-101F2;0.0749745!10838-111E1;0.0931758!10759-110E3;0.98898!10514-107E1;0.573427!10465-106H6;0.0247922!10691-109F7;0.0581916!10843-111E6;0.766971!10844-111E7;0.964727!11747-123G1;0.921436!11748-123G2;0.792377!11749-123G3;0.688488!11750-123G4;0.775735!11751-123G5;0.209686!11840-124H4;0.151245!11752-123G6;0.504011!11753-123G7;0.936045!11754-123G8;0.302196!11755-123G9;0.684222!11756-123H1;0.641185!11833-124G6;0.472542!11760-123H5;0.879839!11836-124G9;0.512342!11758-123H3;0.794474!11835-124G8;0.866817!11762-123H7;0.407441!11838-124H2;0.217535!11757-123H2;0.649468!11759-123H4;0.942086!11761-123H6;0.776547!11842-124H6;0.175146!11837-124H1;0.545429!10568-108B1;0.19771!13230-141I8;0.522854!13231-141I9;0.51527!10696-109G3;0.437395!10493-107B7;0.0424163!10494-107B8;0.630851!10850-111F4;0.362231!10851-111F5;0.829672!10852-111F6;0.167811!10853-111F7;0.355754!10854-111F8;0.617907!10855-111F9;0.95756!10856-111G1;0.0935723!10847-111F1;0.224221!10846-111E9;0.0941169!10848-111F2;0.53648!10845-111E8;0.483092!10857-111G2;0.38065!10858-111G3;0.662914!10156-103A3;0.712221!11901-125F2;0.216535!11902-125F3;0.0201808!11903-125F4;0.051159!10689-109F5;0.0367645!10648-109A9;0.89833!10784-110H1;0.405384!10744-110C6;0.973699!10772-110F7;0.00671035!10474-106I6;0.0294228!10600-108E6;0.0019638!10684-109E9;0.983384!12226-129F3;0.943068!12227-129F4;0.519327!10508-107D4;0.0647737!10539-107G8;0.912664!10607-108F4;0.96215!10555-107I6;0.0669163!10774-110F9;0.988158!10637-108I7;0.040774!10663-109C6;0.422168!10728-110A8;0.427097!10729-110A9;0.353178!10430-106D7;0.0249405!10730-110B1;0.20374!10813-111B3;0.74161!10812-111B2;0.028128!10037-101F1;0.618736!10172-103C1;0.235229!10163-103B1;0.346665!10076-102A4;0.215844!10073-102A1;0.28917!10036-101E9;0.483544!10195-103E6;0.230809!10277-104E7;0.23566!10434-106E2;0.172762!10550-107I1;0.788771!10545-107H5;0.367627!10544-107H4;0.534225!10704-109H2;0.53685!10510-107D6;0.0643888!10558-107I9;0.680152!10020-101D2;0.486225!10732-110B3;0.00376797!10049-101G4;0.397179!10698-109G5;0.0577054!10437-106E5;0.0399537!10417-106C3;0.615593!10035-101E8;0.545713!10171-103B9;0.316133!10157-103A4;0.364932!10034-101E7;0.223689!10072-101I9;0.256683!10199-103F1;0.408387!10200-103F2;0.0349342!10697-109G4;0.018987!10723-110A3;0.510649!10179-103C8;0.581169!10160-103A7;0.374834!10180-103C9;0.32592!10162-103A9;0.105959!10021-101D3;0.0608204!10840-111E3;0.033993!10706-109H4;0.0231461!10033-101E6;0.417354!10032-101E5;0.234056!10490-107B4;0.283276!10439-106E7;0.639418!10022-101D4;0.867826!10176-103C5;0.00108995!10469-106I1;0.274741!10067-101I4;0.670036!10411-106B6;0.000792972!10471-106I3;0.480092!10030-101E3;0.59819!10475-106I7;0.00968504!10787-110H4;0.559192!10477-106I9;0.359443!10695-109G2;0.932666!11771-123I7;0.0199754!11772-123I8;0.712605!11773-123I9;0.428533!10093-102C3;0.160785!10442-106F1;0.0267084!10442-106F1;0.215971!10201-103F3;0.258487!10639-108I9;0.000879497!11843-124H7;0.294813!11841-124H5;0.302187!10693-109F9;0.643317!10436-106E4;0.653774!10483-107A6;0.756741!10282-104F3;0.967842!10023-101D5;0.666308!10066-101I3;0.310108!10065-101I2;0.0239202!10800-110I8;0.00342742!10610-108F7;0.94865!10841-111E4;0.858132!10541-107H1;0.420017!10842-111E5;0.24664!10562-108A4;0.8383!10024-101D6;0.865928!10064-101I1;0.0568985!10609-108F6;0.0330542!10048-101G3;0.841502!10781-110G7;0.000902218!10181-103D1;0.943895!10159-103A6;0.172778!10056-101H2;0.180804!10737-110B8;0.044703!10025-101D7;0.0459349!10044-101F8;0.397702!10424-106D1;0.0512781!10463-106H4;0.0144306!10616-108G4;0.235377!10486-107A9;0.97641!10062-101H8;0.783857!10202-103F4;0.000411165!10158-103A5;0.00731104!10441-106E9;0.116421!10031-101E4;0.505511!10063-101H9;0.20912!10063-101H9;0.325241!11763-123H8;0.0141084!11765-123I1;0.0909579!11768-123I4;0.176061!10807-111A6;0.182181!10790-110H7;0.275342!10798-110I6;0.307549!10786-110H3;0.667757!10591-108D6;0.819071!10593-108D8;0.913966!10590-108D5;0.628091!10026-101D8;0.231541!10096-102C6;0.0691399!10168-103B6;0.847443!10154-103A1;0.213272!10209-103G2;0.154922!10061-101H7;0.0239685!10027-101D9;0.00256747!10043-101F7;0.947896!10783-110G9;0.327982!10028-101E1;0.893691!10060-101H6;0.0392287!10203-103F5;0.00290278!10059-101H5;0.0282653!10047-101G2;0.0683363!10029-101E2;0.0365917!10058-101H4;0.00783554!10418-106C4;0.00273226!10492-107B6;0.8354!10694-109G1;0.95689!10797-110I5;0.0440015!10057-101H3;0.718185!10100-102D1;0.0204793!10055-101H1;0.00019943!10204-103F6;0.000134884!10191-103E2;0.00166152!10563-108A5;0.0185163
|name=CNhs12043_bu_f1
|name=CNhs12043_bu_f1
|tomtom_result=STAT1#MA0137.2;5;2.14338e-05;0.0102025;0.0204049;10;CCGGGAGAAC;GGTTTCCGGGAAATG;-!Stat3#MA0144.1;2;0.00214611;1.02155;0.648006;8;CCGGGAGAAC;TTCCAGGAAG;+!znf143#MA0088.1;10;0.00272271;1.29601;0.648006;10;CCGGGAGAAC;GCAAGGCATGATGGGAAATC;-!ELF5#MA0136.1;-1;0.00756799;3.60236;1;9;CCGGGAGAAC;AAGGAAGTA;-!REL#MA0101.1;-3;0.00851546;4.05336;1;7;CCGGGAGAAC;GGAAATCCCC;-!NFATC2#MA0152.1;-2;0.00936045;4.45557;1;7;CCGGGAGAAC;TGGAAAA;-!Trl#MA0205.1;0;0.0112005;5.33143;1;10;CCGGGAGAAC;GAGAGAGCAA;-!ETS1#MA0098.1;-2;0.0129928;6.18457;1;6;CCGGGAGAAC;CGGAAA;-!GCR2#MA0305.1;-2;0.0150055;7.14262;1;7;CCGGGAGAAC;AGGAAGC;-!Macho-1#MA0118.1;-1;0.0159107;7.5735;1;9;CCGGGAGAAC;TGGGGGGTC;+!dl_2#MA0023.1;-3;0.0188085;8.95284;1;7;CCGGGAGAAC;GGAAAACCCC;-!PUT3#MA0358.1;1;0.0189696;9.02955;1;7;CCGGGAGAAC;CCCGGGAA;+!SPI1#MA0080.1;-2;0.0204438;9.73125;1;6;CCGGGAGAAC;CGGAAG;+
}}
}}

Latest revision as of 13:08, 7 September 2012

Full Name: CNhs12043_bu_f1

Motif matrix
POACGT
1223.99482677798483521.2336186134161335.956419321318332.21224977269232
2321.63806282327073400.722552926036659.09860644956397331.9378922865409
3450.64598982960610.6537770365948691473.2360637863106188.8612838329002
40.00.01113.39711448541040.0
50.00.01113.39711448541040.0
61113.39711448541040.00.00.0
7443.34016228897380.29445965735332386669.46803288173010.29445965735332386
8620.4911651766855187.16487313044865301.840307807807053.9007683704706713
9359.0351716390309334.0034124954638296.8661619572933123.49236839362365
10310.4430651364486364.9925033921228333.1714648683026104.79008108853787

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
STAT1#MA0137.252.14338e-050.01020250.020404910CCGGGAGAACGGTTTCCGGGAAATG-
Stat3#MA0144.120.002146111.021550.6480068CCGGGAGAACTTCCAGGAAG+
znf143#MA0088.1100.002722711.296010.64800610CCGGGAGAACGCAAGGCATGATGGGAAATC-
ELF5#MA0136.1-10.007567993.6023619CCGGGAGAACAAGGAAGTA-
REL#MA0101.1-30.008515464.0533617CCGGGAGAACGGAAATCCCC-
NFATC2#MA0152.1-20.009360454.4555717CCGGGAGAACTGGAAAA-
Trl#MA0205.100.01120055.33143110CCGGGAGAACGAGAGAGCAA-
ETS1#MA0098.1-20.01299286.1845716CCGGGAGAACCGGAAA-
GCR2#MA0305.1-20.01500557.1426217CCGGGAGAACAGGAAGC-
Macho-1#MA0118.1-10.01591077.573519CCGGGAGAACTGGGGGGTC+
dl_2#MA0023.1-30.01880858.9528417CCGGGAGAACGGAAAACCCC-
PUT3#MA0358.110.01896969.0295517CCGGGAGAACCCCGGGAA+
SPI1#MA0080.1-20.02044389.7312516CCGGGAGAACCGGAAG+
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