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MacroAPE 1083:COE1 f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;182.51539556040018;543.2421476854983;576.8183564021358;502.6258187099166!2;70.91794422713683;373.4261075689057;129.46480076197;1231.39286579...")
 
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574074!10597-108E3;0.0986102!10717-109I6;0.0383636!10455-106G5;0.05064!10534-107G3;0.0333633!10429-106D6;0.8111!10464-106H5;0.805906!10827-111C8;0.628191!10789-110H6;0.533778!10828-111C9;0.033989!10788-110H5;0.00103758!10792-110H9;0.661841!10765-110E9;0.0594848!10829-111D1;0.335129!10830-111D2;0.402106!10831-111D3;0.304839!10832-111D4;0.0390393!10833-111D5;0.389199!10764-110E8;0.875933!10770-110F5;0.463267!10399-106A3;0.665233!10400-106A4;0.473429!10405-106A9;0.347327!10834-111D6;0.288845!10835-111D7;0.297013!10836-111D8;0.433392!10837-111D9;0.132093!10699-109G6;0.980114!10802-111A1;0.960883!10796-110I4;0.299936!10010-101C1;0.222101!10810-111A9;0.0315404!10421-106C7;0.0218664!10708-109H6;0.0302729!12235-129G3;0.0107624!12236-129G4;0.551067!12237-129G5;0.645121!10167-103B5;0.932444!10151-102I7;0.374845!10428-106D5;0.511349!10795-110I3;0.0728883!10805-111A4;0.638933!10052-101G7;0.00363901!10189-103D9;0.242863!10589-108D4;0.00198065!10425-106D2;0.26907!10427-106D4;0.017899!10702-109G9;0.00190631!10432-106D9;0.179722!10496-107C1;0.202014!10718-109I7;0.524856!10011-101C2;0.445825!10053-101G8;0.316304!10686-109F2;0.0116393!10084-102B3;0.0156636!10012-101C3;0.65668!10085-102B4;0.657176!10482-107A5;0.151589!10419-106C5;0.0567153!10080-102A8;0.115737!10760-110E4;0.30538!10709-109H7;0.0479779!10710-109H8;0.303511!10703-109H1;0.126268!10719-109I8;0.156167!10642-109A3;0.0972606!10177-103C6;0.00394858!10164-103B2;0.669571!10173-103C2;0.663808!10166-103B4;0.317183!10083-102B2;0.364097!10188-103D8;0.307103!10552-107I3;0.66242!10553-107I4;0.430286!10013-101C4;0.141269!10536-107G5;0.0820649!10618-108G6;0.0129852!10423-106C9;0.348247!10785-110H2;0.822311!12238-129G6;0.936918!12239-129G7;0.327299!12240-129G8;0.0332761!10416-106C2;0.0676802!10801-110I9;0.394952!10766-110F1;0.914301!10824-111C5;0.572547!10825-111C6;0.340894!10826-111C7;0.363711!10454-106G4;0.33403!10409-106B4;0.177012!10638-108I8;0.284192!10636-108I6;0.569796!10513-107D9;0.43973!10420-106C6;0.0102773!10082-102B1;0.0366709!10014-101C5;0.319184!10070-101I7;0.0309626!10452-106G2;0.132373!10453-106G3;0.188514!10449-106F8;0.385724!10042-101F6;0.435328!10069-101I6;0.879681!10193-103E4;0.101627!10631-108I1;0.581461!10438-106E6;0.435107!10488-107B2;0.102289!10196-103E7;0.0438168!10071-101I8;0.452079!10071-101I8;0.100088!10041-101F5;0.142705!10451-106G1;0.255648!10450-106F9;0.0117679!10604-108F1;0.0108225!10605-108F2;0.0043161!10606-108F3;0.0172512!10603-108E9;0.00432759!10497-107C2;0.0191145!10448-106F7;0.389939!10643-109A4;0.0402118!10426-106D3;0.102802!10431-106D8;0.0214264!10197-103E8;0.0041307!10443-106F2;0.0101053!10815-111B5;0.101951!10816-111B6;0.591329!10817-111B7;0.521274!10015-101C6;0.450515!10410-106B5;0.0249488!10054-101G9;0.0697794!10758-110E2;0.195527!10711-109H9;0.00105615!10040-101F4;0.164224!10470-106I2;0.531068!10415-106C1;0.92225!10198-103E9;0.782922!10614-108G2;0.0878479!10612-108F9;0.146349!10549-107H9;0.453624!10615-108G3;0.00420706!10487-107B1;0.0090175!10433-106E1;0.584639!10688-109F4;0.439118!10444-106F3;0.231861!10444-106F3;0.124308!10485-107A8;0.225482!10413-106B8;0.0272126!10175-103C4;0.00178553!10161-103A8;0.514659!12131-128D7;0.988234!10624-108H3;0.224639!10712-109I1;0.000112843!10205-103F7;0.00643692!10206-103F8;0.63601!10207-103F9;0.479437!10050-101G5;0.178122!10051-101G6;0.538229!10016-101C7;0.193276!10046-101G1;0.414445!10778-110G4;0.607668!10633-108I3;0.00907935!10818-111B8;0.00264453!10819-111B9;0.18758!10820-111C1;0.170484!10484-107A7;0.163405!10808-111A7;0.0797655!10169-103B7;0.382834!10153-102I9;0.668571!13425-144D5;0.684479!13433-144E4;0.143495!13437-144E8;0.204821!11904-125F5;0.471352!11905-125F6;0.24644!10039-101F3;0.95209!10791-110H8;0.543563!10017-101C8;0.0976082!10045-101F9;0.0010564!10509-107D5;0.104801!10839-111E2;0.222348!10692-109F8;0.916949!10079-102A7;0.0036336!10078-102A6;0.152646!10721-110A1;0.322257!10569-108B2;0.0364826!10570-108B3;0.502459!10571-108B4;0.428108!10647-109A8;0.947771!10752-110D5;0.0219725!10782-110G8;0.0152253!10726-110A6;0.0144393!10018-101C9;0.00188411!10086-102B5;0.00063816!10182-103D2;0.0357823!10165-103B3;0.365594!10499-107C4;0.830284!10408-106B3;0.113074!10019-101D1;0.721176!10068-101I5;0.00648925!10075-102A3;0.0458893!10077-102A5;0.00402567!10727-110A7;0.00286263!10775-110G1;0.107671!10412-106B7;0.136507!12231-129F8;0.00486506!12232-129F9;0.0956162!12233-129G1;0.390817!12234-129G2;0.286072!10414-106B9;0.107918!10170-103B8;0.00051696!10183-103D3;0.51394!10150-102I6;0.456097!10174-103C3;0.647729!10155-103A2;0.774173!10038-101F2;0.647231!10838-111E1;0.915193!10759-110E3;0.0428863!10514-107E1;0.0279033!10465-106H6;0.122979!10691-109F7;0.138241!10843-111E6;0.371431!10844-111E7;0.0200308!11747-123G1;0.104227!11748-123G2;0.59852!11749-123G3;0.87281!11750-123G4;0.370362!11751-123G5;0.693291!11840-124H4;0.445584!11752-123G6;0.242824!11753-123G7;0.933156!11754-123G8;0.806783!11755-123G9;0.907302!11756-123H1;0.622869!11833-124G6;0.471533!11760-123H5;0.792292!11836-124G9;0.264538!11758-123H3;0.590382!11835-124G8;0.843139!11762-123H7;0.514183!11838-124H2;0.983365!11757-123H2;0.258438!11759-123H4;0.633199!11761-123H6;0.9651!11842-124H6;0.949905!11837-124H1;0.225237!10568-108B1;0.44039!13230-141I8;0.155934!13231-141I9;0.39165!10696-109G3;0.409802!10493-107B7;0.0162224!10494-107B8;0.00778885!10850-111F4;0.0782897!10851-111F5;0.00322882!10852-111F6;0.0544785!10853-111F7;0.000112944!10854-111F8;0.0678303!10855-111F9;0.0509666!10856-111G1;0.77909!10847-111F1;0.145235!10846-111E9;0.000160026!10848-111F2;0.00952293!10845-111E8;0.159569!10857-111G2;0.211096!10858-111G3;0.125549!10156-103A3;0.00860537!11901-125F2;0.674276!11902-125F3;0.0852117!11903-125F4;0.421908!10689-109F5;0.0522985!10648-109A9;0.0258025!10784-110H1;0.177383!10744-110C6;0.0329939!10772-110F7;0.125815!10474-106I6;0.899939!10600-108E6;0.00185586!10684-109E9;0.00121986!12226-129F3;0.199932!12227-129F4;0.950945!10508-107D4;0.0250536!10539-107G8;0.0604348!10607-108F4;0.0398469!10555-107I6;0.0134537!10774-110F9;0.0562716!10637-108I7;0.0963622!10663-109C6;0.0390146!10728-110A8;0.0187173!10729-110A9;0.0137346!10430-106D7;0.00388575!10730-110B1;0.464057!10813-111B3;0.246349!10812-111B2;0.393152!10037-101F1;0.705496!10172-103C1;0.544993!10163-103B1;0.502983!10076-102A4;0.682551!10073-102A1;0.418371!10036-101E9;0.0869261!10195-103E6;0.527808!10277-104E7;0.599559!10434-106E2;0.426355!10550-107I1;0.0767263!10545-107H5;0.000274388!10544-107H4;0.86152!10704-109H2;1.32167e-06!10510-107D6;0.335621!10558-107I9;0.0130939!10020-101D2;1.79329e-05!10732-110B3;0.296481!10049-101G4;0.0454438!10698-109G5;0.762943!10437-106E5;0.460962!10417-106C3;0.0225762!10035-101E8;0.903817!10171-103B9;0.483139!10157-103A4;0.473875!10034-101E7;0.654178!10072-101I9;0.518965!10199-103F1;0.115186!10200-103F2;0.0155223!10697-109G4;0.0319166!10723-110A3;0.149998!10179-103C8;0.148828!10160-103A7;0.520945!10180-103C9;0.94716!10162-103A9;0.856093!10021-101D3;0.849505!10840-111E3;0.028058!10706-109H4;0.011018!10033-101E6;0.0160033!10032-101E5;0.512164!10490-107B4;0.567908!10439-106E7;0.028091!10022-101D4;0.34712!10176-103C5;0.171271!10469-106I1;0.523565!10067-101I4;0.20235!10411-106B6;0.7211!10471-106I3;0.127295!10030-101E3;0.332271!10475-106I7;0.194203!10787-110H4;0.145081!10477-106I9;0.218132!10695-109G2;0.00436195!11771-123I7;0.0132431!11772-123I8;0.0222342!11773-123I9;0.0123862!10093-102C3;0.00264265!10442-106F1;0.0011094!10442-106F1;0.225217!10201-103F3;0.117784!10639-108I9;0.0951136!11843-124H7;0.233228!11841-124H5;0.0599533!10693-109F9;0.238197!10436-106E4;0.0210657!10483-107A6;0.872104!10282-104F3;0.397476!10023-101D5;0.771081!10066-101I3;0.191332!10065-101I2;0.175904!10800-110I8;0.0420348!10610-108F7;0.00380652!10841-111E4;0.205855!10541-107H1;0.00903387!10842-111E5;0.0134005!10562-108A4;0.069497!10024-101D6;0.0295404!10064-101I1;0.0177844!10609-108F6;0.107274!10048-101G3;0.114199!10781-110G7;0.436807!10181-103D1;0.0393073!10159-103A6;0.782905!10056-101H2;0.472535!10737-110B8;0.919961!10025-101D7;0.00314709!10044-101F8;3.14056e-05!10424-106D1;0.000402068!10463-106H4;0.0334479!10616-108G4;0.00140151!10486-107A9;0.813733!10062-101H8;0.634456!10202-103F4;0.8519!10158-103A5;0.000435571!10441-106E9;0.535847!10031-101E4;0.00253594!10063-101H9;0.603187!10063-101H9;0.099318!11763-123H8;0.0530413!11765-123I1;0.212033!11768-123I4;0.374941!10807-111A6;0.102051!10790-110H7;0.00823212!10798-110I6;0.0586355!10786-110H3;0.341611!10591-108D6;0.0631957!10593-108D8;0.387637!10590-108D5;0.389659!10026-101D8;0.060967!10096-102C6;0.485693!10168-103B6;0.0165183!10154-103A1;0.466763!10209-103G2;0.874593!10061-101H7;0.000841839!10027-101D9;0.098805!10043-101F7;0.0440927!10783-110G9;0.0028206!10028-101E1;0.104961!10060-101H6;0.00600923!10203-103F5;0.30632!10059-101H5;0.0122661!10047-101G2;0.0648683!10029-101E2;5.39202e-05!10058-101H4;0.00462561!10418-106C4;0.157989!10492-107B6;0.0133737!10694-109G1;0.404383!10797-110I5;0.000953137!10057-101H3;0.00947187!10100-102D1;0.210487!10055-101H1;0.15355!10204-103F6;0.581043!10191-103E2;0.975257!10563-108A5;0.000672649
|name=COE1_f2
|name=COE1_f2
|tomtom_result=EBF1#MA0154.1;-1;1.04188e-06;0.000495933;0.000986099;10;GTCCCTGGGGAC;TCCCTTGGGT;-!Zfp423#MA0116.1;2;0.00204528;0.973553;0.540371;12;GTCCCTGGGGAC;GCACCCCTGGGTGCC;-!MZF1_1-4#MA0056.1;-5;0.00298846;1.42251;0.540371;6;GTCCCTGGGGAC;TGGGGA;+!PUT3#MA0358.1;0;0.00324221;1.54329;0.540371;8;GTCCCTGGGGAC;TTCCCGGG;-!INSM1#MA0155.1;-1;0.00342562;1.63059;0.540371;11;GTCCCTGGGGAC;TGTCAGGGGGCG;+!YJL103C#MA0427.1;-1;0.00465366;2.21514;0.548664;11;GTCCCTGGGGAC;TCTCCGGAGCT;-!TFAP2A#MA0003.1;-1;0.00583696;2.77839;0.548664;9;GTCCCTGGGGAC;GCCCGGGGG;+!REI1#MA0364.1;-3;0.0062908;2.99442;0.548664;7;GTCCCTGGGGAC;TCAGGGG;-!PLAG1#MA0163.1;0;0.00695638;3.31124;0.548664;12;GTCCCTGGGGAC;CCCCCTTGGGCCCC;-!RME1#MA0370.1;-1;0.00998616;4.75341;0.58481;10;GTCCCTGGGGAC;TTCCTTTGGA;-!YPR022C#MA0436.1;-3;0.0107021;5.09419;0.58481;7;GTCCCTGGGGAC;CGTGGGG;-!NHP10#MA0344.1;-1;0.0117066;5.57233;0.58481;8;GTCCCTGGGGAC;TCCCCGGC;-!RGM1#MA0366.1;-1;0.0117399;5.58819;0.58481;5;GTCCCTGGGGAC;CCCCT;-!ADR1#MA0268.1;-4;0.0134987;6.42539;0.608384;7;GTCCCTGGGGAC;GTGGGGT;-!MIG1#MA0337.1;-4;0.0134987;6.42539;0.608384;7;GTCCCTGGGGAC;GCGGGGG;-!MET28#MA0332.1;-4;0.0181997;8.66305;0.782971;6;GTCCCTGGGGAC;CTGTGG;+!CTCF#MA0139.1;5;0.0204195;9.71969;0.82355;12;GTCCCTGGGGAC;TAGCGCCCCCTGGTGGCCA;-
}}
}}

Latest revision as of 13:20, 7 September 2012

Full Name: COE1_f2

Motif matrix
POACGT
1182.51539556040018543.2421476854983576.8183564021358502.6258187099166
270.91794422713683373.4261075689057129.464800761971231.3928657999181
31.5423921804480461799.93951408890353.1810579818495630.5387541067148484
47.8843378855583591608.045675158058913.21034723255858176.06135808174844
52.05864043856694151726.1119269727931.51988633185209375.51126461470419
6381.049760209009154.68783520974375388.493248536383791330.9708744027962
7130.0202933231087515.6280743367566311248.177620521275411.3757301767931
8106.9104116677222735.500286671147031661.19987406777571.5911459512727935
9433.252276785640840.01324.000154388765447.94928718352115
100.494595387045436760.484863054795103941804.22225991607520.0
11966.4226399737722145.61719231821368441.29490103797434251.86698502797753
12421.51671610287826737.2106387585017467.2942005535073179.1801629430596

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
EBF1#MA0154.1-11.04188e-060.0004959330.00098609910GTCCCTGGGGACTCCCTTGGGT-
Zfp423#MA0116.120.002045280.9735530.54037112GTCCCTGGGGACGCACCCCTGGGTGCC-
MZF1_1-4#MA0056.1-50.002988461.422510.5403716GTCCCTGGGGACTGGGGA+
PUT3#MA0358.100.003242211.543290.5403718GTCCCTGGGGACTTCCCGGG-
INSM1#MA0155.1-10.003425621.630590.54037111GTCCCTGGGGACTGTCAGGGGGCG+
YJL103C#MA0427.1-10.004653662.215140.54866411GTCCCTGGGGACTCTCCGGAGCT-
TFAP2A#MA0003.1-10.005836962.778390.5486649GTCCCTGGGGACGCCCGGGGG+
REI1#MA0364.1-30.00629082.994420.5486647GTCCCTGGGGACTCAGGGG-
PLAG1#MA0163.100.006956383.311240.54866412GTCCCTGGGGACCCCCCTTGGGCCCC-
RME1#MA0370.1-10.009986164.753410.5848110GTCCCTGGGGACTTCCTTTGGA-
YPR022C#MA0436.1-30.01070215.094190.584817GTCCCTGGGGACCGTGGGG-
NHP10#MA0344.1-10.01170665.572330.584818GTCCCTGGGGACTCCCCGGC-
RGM1#MA0366.1-10.01173995.588190.584815GTCCCTGGGGACCCCCT-
ADR1#MA0268.1-40.01349876.425390.6083847GTCCCTGGGGACGTGGGGT-
MIG1#MA0337.1-40.01349876.425390.6083847GTCCCTGGGGACGCGGGGG-
MET28#MA0332.1-40.01819978.663050.7829716GTCCCTGGGGACCTGTGG+
CTCF#MA0139.150.02041959.719690.8235512GTCCCTGGGGACTAGCGCCCCCTGGTGGCCA-
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:COE1_f2&oldid=2133967"