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MacroAPE 1083:MYB ERMYB-Myb-ChIPSeq(GSE22095)/Homer: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;740;7;5942;359!2;1198;7;4673;1170!3;7;7027;7;7!4;2277;2255;2509;7!5;7;7;7027;7!6;7;7;7;7027!7;7;7;7;7027!8;3750;7;3284;7 |macroape_1083_sam...")
 
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179-129A1;0.00118483!12180-129A2;0.368849!12181-129A3;0.419708!12176-128I7;0.77548!12177-128I8;0.44577!12182-129A4;0.710655!12183-129A5;0.67223!12184-129A6;0.300972!10809-111A8;0.733414!10597-108E3;0.000554633!10717-109I6;0.109761!10455-106G5;0.130597!10534-107G3;1.03828e-05!10429-106D6;0.000125601!10464-106H5;1.34613e-05!10827-111C8;4.86412e-05!10789-110H6;4.76679e-05!10828-111C9;0.00139074!10788-110H5;0.00103528!10792-110H9;8.22733e-05!10765-110E9;2.3411e-05!10829-111D1;1.61863e-05!10830-111D2;6.53157e-06!10831-111D3;0.00319137!10832-111D4;0.00318366!10833-111D5;1.0657e-05!10764-110E8;6.10409e-06!10770-110F5;0.000720971!10399-106A3;0.000243535!10400-106A4;7.39205e-06!10405-106A9;4.68953e-07!10834-111D6;6.18956e-07!10835-111D7;2.29789e-05!10836-111D8;0.000447236!10837-111D9;0.00187546!10699-109G6;0.00058969!10802-111A1;5.86547e-06!10796-110I4;0.00275188!10010-101C1;0.0112392!10810-111A9;0.00486959!10421-106C7;0.000272544!10708-109H6;1.83464e-05!12235-129G3;0.00158847!12236-129G4;0.0163718!12237-129G5;0.91466!10167-103B5;0.0802991!10151-102I7;0.41797!10428-106D5;0.345425!10795-110I3;0.0297009!10805-111A4;9.71913e-05!10052-101G7;0.0124613!10189-103D9;0.00450699!10589-108D4;0.0251085!10425-106D2;0.00165482!10427-106D4;0.543926!10702-109G9;0.000270424!10432-106D9;0.00651395!10496-107C1;0.0315161!10718-109I7;0.857926!10011-101C2;6.64581e-06!10053-101G8;0.00106205!10686-109F2;0.987212!10084-102B3;0.56306!10012-101C3;0.140778!10085-102B4;0.308573!10482-107A5;0.482573!10419-106C5;0.163131!10080-102A8;0.0523862!10760-110E4;0.000501946!10709-109H7;0.084479!10710-109H8;0.00138116!10703-109H1;0.0182039!10719-109I8;0.0105525!10642-109A3;0.00318871!10177-103C6;0.00384621!10164-103B2;0.489775!10173-103C2;0.724525!10166-103B4;0.726858!10083-102B2;0.604489!10188-103D8;0.381221!10552-107I3;0.242316!10553-107I4;0.0107191!10013-101C4;0.674774!10536-107G5;0.000377101!10618-108G6;0.504791!10423-106C9;0.142448!10785-110H2;0.123186!12238-129G6;0.293706!12239-129G7;0.00039144!12240-129G8;0.000748746!10416-106C2;0.00105374!10801-110I9;0.000392939!10766-110F1;0.000214261!10824-111C5;0.000645743!10825-111C6;1.39503e-06!10826-111C7;5.10788e-06!10454-106G4;8.61544e-06!10409-106B4;7.35643e-05!10638-108I8;0.000276841!10636-108I6;0.0183724!10513-107D9;0.0195282!10420-106C6;0.0303958!10082-102B1;0.00316126!10014-101C5;0.0103471!10070-101I7;0.0100263!10452-106G2;0.00163891!10453-106G3;0.0374029!10449-106F8;0.00179011!10042-101F6;0.000819437!10069-101I6;0.302544!10193-103E4;0.00190373!10631-108I1;0.379209!10438-106E6;2.07777e-07!10488-107B2;0.0092913!10196-103E7;0.0626493!10071-101I8;0.00579159!10071-101I8;0.000942727!10041-101F5;0.654254!10451-106G1;0.0197829!10450-106F9;0.00556833!10604-108F1;0.0123262!10605-108F2;0.0794138!10606-108F3;0.0648687!10603-108E9;0.145778!10497-107C2;0.068228!10448-106F7;0.0581952!10643-109A4;0.0743684!10426-106D3;0.226218!10431-106D8;0.259275!10197-103E8;0.00452731!10443-106F2;0.0234574!10815-111B5;0.023678!10816-111B6;0.00129682!10817-111B7;0.00276774!10015-101C6;0.00171714!10410-106B5;0.00203288!10054-101G9;0.00989257!10758-110E2;0.00911652!10711-109H9;0.092498!10040-101F4;0.00163934!10470-106I2;0.454188!10415-106C1;0.0643901!10198-103E9;0.245957!10614-108G2;0.00548889!10612-108F9;0.928731!10549-107H9;0.0114861!10615-108G3;0.000120215!10487-107B1;0.000571085!10433-106E1;0.229781!10688-109F4;0.309794!10444-106F3;0.348419!10444-106F3;0.174967!10485-107A8;0.218376!10413-106B8;0.121686!10175-103C4;0.633115!10161-103A8;0.163485!12131-128D7;0.203091!10624-108H3;2.26977e-06!10712-109I1;0.409157!10205-103F7;8.03942e-06!10206-103F8;0.00226765!10207-103F9;0.00745739!10050-101G5;0.0033056!10051-101G6;0.157163!10016-101C7;0.00347725!10046-101G1;0.0231372!10778-110G4;0.128369!10633-108I3;4.30985e-05!10818-111B8;0.0431622!10819-111B9;0.0341552!10820-111C1;0.0317048!10484-107A7;0.024707!10808-111A7;0.152667!10169-103B7;4.928e-06!10153-102I9;0.507834!13425-144D5;0.304929!13433-144E4;0.097264!13437-144E8;0.0750946!11904-125F5;0.0609121!11905-125F6;0.448553!10039-101F3;0.603511!10791-110H8;0.425223!10017-101C8;0.848324!10045-101F9;0.00669859!10509-107D5;0.0308632!10839-111E2;0.025322!10692-109F8;0.996689!10079-102A7;0.124381!10078-102A6;0.00127776!10721-110A1;0.00331674!10569-108B2;0.0155687!10570-108B3;0.000152082!10571-108B4;0.00042346!10647-109A8;0.00735346!10752-110D5;4.41322e-05!10782-110G8;0.00102419!10726-110A6;0.00262199!10018-101C9;0.0175783!10086-102B5;0.00129472!10182-103D2;0.0656854!10165-103B3;0.154106!10499-107C4;0.200876!10408-106B3;0.335215!10019-101D1;0.0496241!10068-101I5;0.0244787!10075-102A3;0.273726!10077-102A5;0.00456446!10727-110A7;0.00542158!10775-110G1;0.00540525!10412-106B7;1.91357e-05!12231-129F8;0.412669!12232-129F9;0.0144733!12233-129G1;0.00951513!12234-129G2;0.0100852!10414-106B9;0.038787!10170-103B8;0.0122273!10183-103D3;0.459185!10150-102I6;0.288682!10174-103C3;0.269949!10155-103A2;0.127068!10038-101F2;0.194108!10838-111E1;0.137356!10759-110E3;0.0245104!10514-107E1;0.10276!10465-106H6;0.119264!10691-109F7;0.674451!10843-111E6;0.0872693!10844-111E7;0.004714!11747-123G1;0.0665987!11748-123G2;0.140439!11749-123G3;0.0251267!11750-123G4;0.378516!11751-123G5;0.0205689!11840-124H4;0.0278479!11752-123G6;0.00546771!11753-123G7;0.0115476!11754-123G8;0.0210196!11755-123G9;0.212523!11756-123H1;0.727965!11833-124G6;0.0673497!11760-123H5;0.00372231!11836-124G9;0.0334896!11758-123H3;0.0557193!11835-124G8;0.0060399!11762-123H7;0.000191561!11838-124H2;0.00322007!11757-123H2;0.00113021!11759-123H4;0.856739!11761-123H6;0.000696006!11842-124H6;0.00749674!11837-124H1;0.0053402!10568-108B1;0.000110947!13230-141I8;0.0466571!13231-141I9;0.000143088!10696-109G3;0.00108458!10493-107B7;0.417792!10494-107B8;0.112658!10850-111F4;0.72706!10851-111F5;0.596493!10852-111F6;0.0182632!10853-111F7;0.435073!10854-111F8;0.0592761!10855-111F9;0.0489939!10856-111G1;0.686454!10847-111F1;0.825886!10846-111E9;0.115933!10848-111F2;0.419531!10845-111E8;0.0874212!10857-111G2;0.0718636!10858-111G3;0.0131825!10156-103A3;0.0438963!11901-125F2;0.263179!11902-125F3;0.136832!11903-125F4;0.0968415!10689-109F5;0.204012!10648-109A9;0.503638!10784-110H1;0.907764!10744-110C6;0.179095!10772-110F7;0.012895!10474-106I6;5.71791e-05!10600-108E6;0.00103038!10684-109E9;0.19295!12226-129F3;0.0484131!12227-129F4;0.0707958!10508-107D4;1.86736e-07!10539-107G8;0.109879!10607-108F4;0.11675!10555-107I6;0.0387271!10774-110F9;0.104715!10637-108I7;0.0634248!10663-109C6;0.0417808!10728-110A8;0.0254864!10729-110A9;0.07032!10430-106D7;0.00249649!10730-110B1;7.54709e-07!10813-111B3;0.0158968!10812-111B2;0.00171601!10037-101F1;4.99781e-05!10172-103C1;0.486248!10163-103B1;0.475324!10076-102A4;0.244832!10073-102A1;0.228597!10036-101E9;0.6742!10195-103E6;0.3933!10277-104E7;0.312368!10434-106E2;0.0644604!10550-107I1;0.125166!10545-107H5;0.032594!10544-107H4;0.650049!10704-109H2;0.133406!10510-107D6;0.377756!10558-107I9;0.452373!10020-101D2;0.975663!10732-110B3;0.012765!10049-101G4;0.573197!10698-109G5;0.0140814!10437-106E5;0.191933!10417-106C3;0.0658577!10035-101E8;0.192273!10171-103B9;0.410866!10157-103A4;0.386271!10034-101E7;0.270647!10072-101I9;0.362713!10199-103F1;0.938353!10200-103F2;0.0188027!10697-109G4;0.000299604!10723-110A3;0.188784!10179-103C8;0.530797!10160-103A7;0.301553!10180-103C9;0.980724!10162-103A9;0.503305!10021-101D3;0.748923!10840-111E3;0.000439034!10706-109H4;2.69093e-05!10033-101E6;0.288041!10032-101E5;0.349929!10490-107B4;0.360533!10439-106E7;0.00273994!10022-101D4;0.0633772!10176-103C5;0.00228627!10469-106I1;0.691959!10067-101I4;0.345478!10411-106B6;0.0148916!10471-106I3;0.583481!10030-101E3;0.255432!10475-106I7;0.0134631!10787-110H4;0.0110285!10477-106I9;0.00193247!10695-109G2;0.0752757!11771-123I7;0.0021037!11772-123I8;0.401529!11773-123I9;0.0813496!10093-102C3;0.0228191!10442-106F1;0.00827284!10442-106F1;0.0447415!10201-103F3;0.0235523!10639-108I9;0.00157852!11843-124H7;0.4294!11841-124H5;0.325708!10693-109F9;0.00352812!10436-106E4;0.363853!10483-107A6;0.0615406!10282-104F3;0.0694231!10023-101D5;0.00165977!10066-101I3;0.00307934!10065-101I2;0.0112055!10800-110I8;0.00249096!10610-108F7;0.0109117!10841-111E4;0.0439818!10541-107H1;0.00191147!10842-111E5;0.0183551!10562-108A4;0.0142368!10024-101D6;0.00240117!10064-101I1;0.0103374!10609-108F6;0.00878733!10048-101G3;0.225885!10781-110G7;0.00175596!10181-103D1;0.444189!10159-103A6;0.0384532!10056-101H2;0.22211!10737-110B8;0.0368551!10025-101D7;0.00220451!10044-101F8;0.0558463!10424-106D1;0.0861246!10463-106H4;0.000243928!10616-108G4;0.360015!10486-107A9;0.409208!10062-101H8;0.180675!10202-103F4;0.000234268!10158-103A5;0.0016359!10441-106E9;0.126645!10031-101E4;0.0718319!10063-101H9;0.302612!10063-101H9;0.71505!11763-123H8;0.00468472!11765-123I1;0.0424506!11768-123I4;0.00220283!10807-111A6;0.0632134!10790-110H7;0.0214734!10798-110I6;0.00323143!10786-110H3;0.119689!10591-108D6;0.0726129!10593-108D8;0.0048267!10590-108D5;0.182517!10026-101D8;1.05069e-05!10096-102C6;2.236e-18!10168-103B6;6.72093e-26!10154-103A1;0.139359!10209-103G2;0.276258!10061-101H7;0.0187409!10027-101D9;0.0515494!10043-101F7;0.00422303!10783-110G9;0.428543!10028-101E1;0.299363!10060-101H6;0.0230813!10203-103F5;0.0162407!10059-101H5;0.00223425!10047-101G2;0.000504752!10029-101E2;0.0308647!10058-101H4;0.0620166!10418-106C4;0.0127748!10492-107B6;0.384595!10694-109G1;0.00307328!10797-110I5;0.00405425!10057-101H3;0.967639!10100-102D1;0.00414592!10055-101H1;0.00111132!10204-103F6;0.00543484!10191-103E2;0.00208743!10563-108A5;0.0158812
|name=MYB_ERMYB-Myb-ChIPSeq(GSE22095)/Homer
|name=MYB_ERMYB-Myb-ChIPSeq(GSE22095)/Homer
|tomtom_result=Myb#MA0100.1;0;9.77862e-07;0.000465462;0.000930924;8;GGCGGTTA;GGCCGTTG;+!Gamyb#MA0034.1;0;2.93331e-06;0.00139626;0.00139626;8;GGCGGTTA;GGCGGTTGTC;-!myb.Ph3#MA0054.1;1;0.00230819;1.0987;0.732466;8;GGCGGTTA;AAACGGTTA;-!ovo#MA0126.1;-1;0.00584602;2.78271;1;7;GGCGGTTA;ACTGTTACT;-!prd#MA0239.1;-1;0.00584602;2.78271;1;7;GGCGGTTA;ACTGTTACT;-!run::Bgb#MA0242.1;1;0.00696592;3.31578;1;8;GGCGGTTA;TTGCGGTTA;-!MIZF#MA0131.1;2;0.0090319;4.29919;1;8;GGCGGTTA;GCGGACGTTA;-!UME6#MA0412.1;2;0.0108305;5.1553;1;8;GGCGGTTA;TCGGCGGCTAATT;+!SKN7#MA0381.1;0;0.0131165;6.24347;1;6;GGCGGTTA;GGCCAT;+!YLL054C#MA0429.1;1;0.0205883;9.80002;1;6;GGCGGTTA;CGGCCGA;+
}}
}}

Latest revision as of 13:21, 7 September 2012

Full Name: MYB_ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Motif matrix
POACGT
174075942359
21198746731170
37702777
42277225525097
57770277
67777027
77777027
83750732847

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Myb#MA0100.109.77862e-070.0004654620.0009309248GGCGGTTAGGCCGTTG+
Gamyb#MA0034.102.93331e-060.001396260.001396268GGCGGTTAGGCGGTTGTC-
myb.Ph3#MA0054.110.002308191.09870.7324668GGCGGTTAAAACGGTTA-
ovo#MA0126.1-10.005846022.7827117GGCGGTTAACTGTTACT-
prd#MA0239.1-10.005846022.7827117GGCGGTTAACTGTTACT-
run::Bgb#MA0242.110.006965923.3157818GGCGGTTATTGCGGTTA-
MIZF#MA0131.120.00903194.2991918GGCGGTTAGCGGACGTTA-
UME6#MA0412.120.01083055.155318GGCGGTTATCGGCGGCTAATT+
SKN7#MA0381.100.01311656.2434716GGCGGTTAGGCCAT+
YLL054C#MA0429.110.02058839.8000216GGCGGTTACGGCCGA+
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:MYB_ERMYB-Myb-ChIPSeq(GSE22095)/Homer&oldid=2133970"