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MacroAPE 1083:Motif TGNACT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;5744!02;0;0;5744;0!03;1436;1436;1436;1436!04;5744;0;0;0!05;0;5744;0;0!06;0;0;0;5744 |macroape_1083_sample_pvalues=11376-118A8;0.6001...")
 
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0.262326!10788-110H5;0.271595!10792-110H9;0.405923!10765-110E9;0.450957!10829-111D1;0.463141!10830-111D2;0.499425!10831-111D3;0.157011!10832-111D4;0.432203!10833-111D5;0.443704!10764-110E8;0.413089!10770-110F5;0.899092!10399-106A3;0.577994!10400-106A4;0.691441!10405-106A9;0.651308!10834-111D6;0.610407!10835-111D7;0.376157!10836-111D8;0.173874!10837-111D9;0.131549!10699-109G6;0.281455!10802-111A1;0.0328858!10796-110I4;0.304349!10010-101C1;0.530737!10810-111A9;0.379871!10421-106C7;0.536373!10708-109H6;0.156961!12235-129G3;0.902482!12236-129G4;0.0968193!12237-129G5;0.911338!10167-103B5;0.199171!10151-102I7;0.538279!10428-106D5;0.385861!10795-110I3;0.103695!10805-111A4;0.13908!10052-101G7;0.700826!10189-103D9;0.605503!10589-108D4;0.292339!10425-106D2;0.695266!10427-106D4;0.990115!10702-109G9;0.277039!10432-106D9;0.450342!10496-107C1;0.889847!10718-109I7;0.335316!10011-101C2;0.219646!10053-101G8;0.577539!10686-109F2;0.744778!10084-102B3;0.695839!10012-101C3;0.309811!10085-102B4;0.485081!10482-107A5;0.650914!10419-106C5;0.603253!10080-102A8;0.968267!10760-110E4;0.321223!10709-109H7;0.487408!10710-109H8;0.414464!10703-109H1;0.267539!10719-109I8;0.992841!10642-109A3;0.680857!10177-103C6;0.532828!10164-103B2;0.435032!10173-103C2;0.422442!10166-103B4;0.277241!10083-102B2;0.267996!10188-103D8;0.320572!10552-107I3;0.51911!10553-107I4;0.63233!10013-101C4;0.633377!10536-107G5;0.280581!10618-108G6;0.388576!10423-106C9;0.0409819!10785-110H2;0.27306!12238-129G6;0.222126!12239-129G7;0.977331!12240-129G8;0.677326!10416-106C2;0.460687!10801-110I9;0.466641!10766-110F1;0.15052!10824-111C5;0.139733!10825-111C6;0.0764555!10826-111C7;0.0444946!10454-106G4;0.0376708!10409-106B4;0.107276!10638-108I8;0.401836!10636-108I6;0.914172!10513-107D9;0.831846!10420-106C6;0.799373!10082-102B1;0.962945!10014-101C5;0.161252!10070-101I7;0.105446!10452-106G2;0.07104!10453-106G3;0.316631!10449-106F8;0.35211!10042-101F6;0.466333!10069-101I6;0.513808!10193-103E4;0.609752!10631-108I1;0.365553!10438-106E6;0.324076!10488-107B2;0.463774!10196-103E7;0.324437!10071-101I8;0.656842!10071-101I8;0.114474!10041-101F5;0.487381!10451-106G1;0.436139!10450-106F9;0.280486!10604-108F1;0.680835!10605-108F2;0.445433!10606-108F3;0.6924!10603-108E9;0.307538!10497-107C2;0.316716!10448-106F7;0.790315!10643-109A4;0.346455!10426-106D3;0.939199!10431-106D8;0.907235!10197-103E8;0.623142!10443-106F2;0.24835!10815-111B5;0.19682!10816-111B6;0.413892!10817-111B7;0.319009!10015-101C6;0.368724!10410-106B5;0.670861!10054-101G9;0.0241385!10758-110E2;0.522165!10711-109H9;0.947276!10040-101F4;0.13903!10470-106I2;0.420103!10415-106C1;0.499159!10198-103E9;0.823634!10614-108G2;0.188641!10612-108F9;0.895625!10549-107H9;0.869942!10615-108G3;0.688115!10487-107B1;0.862468!10433-106E1;0.314234!10688-109F4;0.296354!10444-106F3;0.751699!10444-106F3;0.835857!10485-107A8;0.881028!10413-106B8;0.955745!10175-103C4;0.731666!10161-103A8;0.534454!12131-128D7;0.480259!10624-108H3;0.328794!10712-109I1;0.118374!10205-103F7;0.586307!10206-103F8;0.587185!10207-103F9;0.720527!10050-101G5;0.926117!10051-101G6;0.788039!10016-101C7;0.858747!10046-101G1;0.726809!10778-110G4;0.905953!10633-108I3;0.251245!10818-111B8;0.95387!10819-111B9;0.503345!10820-111C1;0.473573!10484-107A7;0.468986!10808-111A7;0.828237!10169-103B7;0.224285!10153-102I9;0.372398!13425-144D5;0.346821!13433-144E4;0.821742!13437-144E8;0.821677!11904-125F5;0.741183!11905-125F6;0.151421!10039-101F3;0.0397367!10791-110H8;0.49394!10017-101C8;0.8976!10045-101F9;0.0748925!10509-107D5;0.237385!10839-111E2;0.114294!10692-109F8;0.853772!10079-102A7;0.526454!10078-102A6;0.764929!10721-110A1;0.988602!10569-108B2;0.262926!10570-108B3;0.584517!10571-108B4;0.873843!10647-109A8;0.494923!10752-110D5;0.739588!10782-110G8;0.141623!10726-110A6;0.236064!10018-101C9;0.630062!10086-102B5;0.0943946!10182-103D2;0.162107!10165-103B3;0.386818!10499-107C4;0.39866!10408-106B3;0.768459!10019-101D1;0.889277!10068-101I5;0.584315!10075-102A3;0.35027!10077-102A5;0.439213!10727-110A7;0.562802!10775-110G1;0.0172401!10412-106B7;0.651786!12231-129F8;0.841805!12232-129F9;0.284389!12233-129G1;0.446179!12234-129G2;0.0777238!10414-106B9;0.0512713!10170-103B8;0.57647!10183-103D3;0.351916!10150-102I6;0.389497!10174-103C3;0.406061!10155-103A2;0.311213!10038-101F2;0.378712!10838-111E1;0.509299!10759-110E3;0.901109!10514-107E1;0.91763!10465-106H6;0.205031!10691-109F7;0.307638!10843-111E6;0.463864!10844-111E7;0.814518!11747-123G1;0.959293!11748-123G2;0.24334!11749-123G3;0.0795346!11750-123G4;0.0560174!11751-123G5;0.211702!11840-124H4;0.152134!11752-123G6;0.378447!11753-123G7;0.487102!11754-123G8;0.046303!11755-123G9;0.276443!11756-123H1;0.722587!11833-124G6;0.324675!11760-123H5;0.36331!11836-124G9;0.0232931!11758-123H3;0.203249!11835-124G8;0.223709!11762-123H7;0.0473244!11838-124H2;0.0167402!11757-123H2;0.0640309!11759-123H4;0.161765!11761-123H6;0.11742!11842-124H6;0.00621856!11837-124H1;0.0253853!10568-108B1;0.0906545!13230-141I8;0.842975!13231-141I9;0.157139!10696-109G3;0.153848!10493-107B7;0.783422!10494-107B8;0.284886!10850-111F4;0.964378!10851-111F5;0.688617!10852-111F6;0.870546!10853-111F7;0.667115!10854-111F8;0.836433!10855-111F9;0.845264!10856-111G1;0.953828!10847-111F1;0.865282!10846-111E9;0.807019!10848-111F2;0.671546!10845-111E8;0.549757!10857-111G2;0.98134!10858-111G3;0.535856!10156-103A3;0.506332!11901-125F2;0.4608!11902-125F3;0.03688!11903-125F4;0.0206992!10689-109F5;0.0606631!10648-109A9;0.717151!10784-110H1;0.694515!10744-110C6;0.446054!10772-110F7;0.351632!10474-106I6;0.554451!10600-108E6;0.618782!10684-109E9;0.956474!12226-129F3;0.752029!12227-129F4;0.368019!10508-107D4;0.87313!10539-107G8;0.879256!10607-108F4;0.767418!10555-107I6;0.768076!10774-110F9;0.864724!10637-108I7;0.776492!10663-109C6;0.742092!10728-110A8;0.931812!10729-110A9;0.52481!10430-106D7;0.899022!10730-110B1;0.430939!10813-111B3;0.922198!10812-111B2;0.779357!10037-101F1;0.484473!10172-103C1;0.441922!10163-103B1;0.398361!10076-102A4;0.444136!10073-102A1;0.357362!10036-101E9;0.330457!10195-103E6;0.524597!10277-104E7;0.416279!10434-106E2;0.706422!10550-107I1;0.372448!10545-107H5;0.575935!10544-107H4;0.895895!10704-109H2;0.600487!10510-107D6;0.169687!10558-107I9;0.793627!10020-101D2;0.877214!10732-110B3;0.302401!10049-101G4;0.489501!10698-109G5;0.209049!10437-106E5;0.152855!10417-106C3;0.535146!10035-101E8;0.521822!10171-103B9;0.447489!10157-103A4;0.327367!10034-101E7;0.376881!10072-101I9;0.479131!10199-103F1;0.34624!10200-103F2;0.7168!10697-109G4;0.567388!10723-110A3;0.833117!10179-103C8;0.701952!10160-103A7;0.675844!10180-103C9;0.64023!10162-103A9;0.807626!10021-101D3;0.650937!10840-111E3;0.957555!10706-109H4;0.499492!10033-101E6;0.126615!10032-101E5;0.440244!10490-107B4;0.511707!10439-106E7;0.562192!10022-101D4;0.968644!10176-103C5;0.404135!10469-106I1;0.487507!10067-101I4;0.457506!10411-106B6;0.24284!10471-106I3;0.810877!10030-101E3;0.639853!10475-106I7;0.712685!10787-110H4;0.599744!10477-106I9;0.856809!10695-109G2;0.859292!11771-123I7;0.486014!11772-123I8;0.845411!11773-123I9;0.386698!10093-102C3;0.666138!10442-106F1;0.54733!10442-106F1;0.478918!10201-103F3;0.663591!10639-108I9;0.34879!11843-124H7;0.717309!11841-124H5;0.945!10693-109F9;0.889454!10436-106E4;0.571879!10483-107A6;0.368498!10282-104F3;0.81299!10023-101D5;0.926767!10066-101I3;0.991281!10065-101I2;0.585534!10800-110I8;0.384259!10610-108F7;0.471793!10841-111E4;0.718922!10541-107H1;0.833507!10842-111E5;0.791618!10562-108A4;0.93518!10024-101D6;0.0983101!10064-101I1;0.0254644!10609-108F6;0.0175548!10048-101G3;0.168541!10781-110G7;0.742698!10181-103D1;0.16515!10159-103A6;0.384134!10056-101H2;0.389674!10737-110B8;0.32643!10025-101D7;0.954934!10044-101F8;0.48713!10424-106D1;0.723338!10463-106H4;0.198428!10616-108G4;0.341262!10486-107A9;0.380168!10062-101H8;0.122382!10202-103F4;0.280071!10158-103A5;0.585586!10441-106E9;0.497753!10031-101E4;0.473203!10063-101H9;0.512718!10063-101H9;0.461345!11763-123H8;0.0610335!11765-123I1;0.045969!11768-123I4;0.462235!10807-111A6;0.634754!10790-110H7;0.872868!10798-110I6;0.933703!10786-110H3;0.508859!10591-108D6;0.277343!10593-108D8;0.699989!10590-108D5;0.846289!10026-101D8;0.612097!10096-102C6;0.152268!10168-103B6;0.784792!10154-103A1;0.445102!10209-103G2;0.420231!10061-101H7;0.63288!10027-101D9;0.427367!10043-101F7;0.935474!10783-110G9;0.930357!10028-101E1;0.555229!10060-101H6;0.520888!10203-103F5;0.37385!10059-101H5;0.642429!10047-101G2;0.493748!10029-101E2;0.876682!10058-101H4;0.636942!10418-106C4;0.408745!10492-107B6;0.931037!10694-109G1;0.597238!10797-110I5;0.686587!10057-101H3;0.998388!10100-102D1;0.851197!10055-101H1;0.38374!10204-103F6;0.239218!10191-103E2;0.859742!10563-108A5;0.51679
|name=motif_TGNACT
|name=motif_TGNACT
|tomtom_result=HNF4A#MA0114.1;0;0.00667828;3.17886;1;6;TGAACT;TGACCTTTGGCCT;-!RXRA::VDR#MA0074.1;0;0.0165922;7.89787;1;6;TGAACT;TGAACCCGATGACCC;-!NR2F1#MA0017.1;0;0.0196692;9.36253;1;6;TGAACT;TGACCTTTGAACCT;+
}}
}}

Latest revision as of 13:26, 7 September 2012

Full Name: motif_TGNACT

Motif matrix
POACGT
010005744
020057440
031436143614361436
045744000
050574400
060005744

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
HNF4A#MA0114.100.006678283.1788616TGAACTTGACCTTTGGCCT-
RXRA::VDR#MA0074.100.01659227.8978716TGAACTTGAACCCGATGACCC-
NR2F1#MA0017.100.01966929.3625316TGAACTTGACCTTTGAACCT+
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