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MacroAPE 1083:CNhs12839 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;954.8001555623164;696.1490061050025;1244.637605941966;455.9361895556583!2;947.2119700433567;23.804470456379637;2325.5940491484143;54.9124675...")
 
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29A5;0.443925!12184-129A6;0.392968!10809-111A8;0.625829!10597-108E3;0.00466214!10717-109I6;0.180005!10455-106G5;0.0125045!10534-107G3;0.0125838!10429-106D6;0.0115437!10464-106H5;0.0139679!10827-111C8;0.0133979!10789-110H6;0.0616252!10828-111C9;0.00307854!10788-110H5;0.0078852!10792-110H9;0.00781434!10765-110E9;0.0124403!10829-111D1;0.0345036!10830-111D2;0.0306143!10831-111D3;0.105943!10832-111D4;0.00668009!10833-111D5;0.00511772!10764-110E8;0.00594745!10770-110F5;0.0295957!10399-106A3;0.152019!10400-106A4;0.0135356!10405-106A9;0.0111521!10834-111D6;0.0139416!10835-111D7;0.0503596!10836-111D8;0.00394064!10837-111D9;0.0128288!10699-109G6;0.00815832!10802-111A1;0.00318316!10796-110I4;0.00655763!10010-101C1;0.0223036!10810-111A9;0.00722676!10421-106C7;0.0446372!10708-109H6;0.00041882!12235-129G3;0.0154097!12236-129G4;0.599366!12237-129G5;0.302468!10167-103B5;0.402886!10151-102I7;0.000285276!10428-106D5;0.000425454!10795-110I3;0.162838!10805-111A4;0.0174179!10052-101G7;0.143035!10189-103D9;0.00594071!10589-108D4;0.0217788!10425-106D2;0.0851661!10427-106D4;0.744192!10702-109G9;0.00513634!10432-106D9;0.305851!10496-107C1;0.000426572!10718-109I7;0.0166736!10011-101C2;0.0109714!10053-101G8;0.00528551!10686-109F2;0.671988!10084-102B3;0.837029!10012-101C3;0.000303257!10085-102B4;0.000136716!10482-107A5;0.00618613!10419-106C5;0.0261277!10080-102A8;0.0155532!10760-110E4;0.0112583!10709-109H7;0.0402632!10710-109H8;0.0170699!10703-109H1;0.0055469!10719-109I8;0.520926!10642-109A3;0.715899!10177-103C6;0.659299!10164-103B2;0.000694828!10173-103C2;0.000431053!10166-103B4;0.00926667!10083-102B2;0.00370172!10188-103D8;0.00225196!10552-107I3;9.32335e-05!10553-107I4;0.00282703!10013-101C4;0.0720975!10536-107G5;0.00774459!10618-108G6;0.0533213!10423-106C9;0.00511148!10785-110H2;0.00444981!12238-129G6;0.0014936!12239-129G7;0.536836!12240-129G8;0.211556!10416-106C2;0.949352!10801-110I9;0.0107075!10766-110F1;0.00128054!10824-111C5;0.00154322!10825-111C6;0.000987834!10826-111C7;0.000856871!10454-106G4;0.000729203!10409-106B4;0.00395442!10638-108I8;0.0037313!10636-108I6;0.000301761!10513-107D9;0.00105323!10420-106C6;0.0273013!10082-102B1;0.238836!10014-101C5;0.0213304!10070-101I7;0.0222194!10452-106G2;0.0129323!10453-106G3;0.0569343!10449-106F8;0.0429738!10042-101F6;0.0463204!10069-101I6;0.00149625!10193-103E4;0.0102307!10631-108I1;0.000306421!10438-106E6;0.0200589!10488-107B2;0.0593026!10196-103E7;0.0133806!10071-101I8;0.0049023!10071-101I8;0.0172132!10041-101F5;0.00389631!10451-106G1;0.00288442!10450-106F9;0.0240542!10604-108F1;0.117018!10605-108F2;0.0182574!10606-108F3;0.0165466!10603-108E9;0.0370531!10497-107C2;0.0394798!10448-106F7;0.001746!10643-109A4;0.0551317!10426-106D3;0.0110821!10431-106D8;0.0132031!10197-103E8;0.0235309!10443-106F2;0.00393419!10815-111B5;0.0148014!10816-111B6;0.00212758!10817-111B7;0.0016672!10015-101C6;0.00199875!10410-106B5;0.0339136!10054-101G9;0.0786558!10758-110E2;0.0011413!10711-109H9;0.155414!10040-101F4;0.0112609!10470-106I2;0.000211791!10415-106C1;0.0019626!10198-103E9;0.000302087!10614-108G2;0.0135043!10612-108F9;0.00136812!10549-107H9;0.00168155!10615-108G3;0.063502!10487-107B1;0.291517!10433-106E1;0.0171998!10688-109F4;0.0214159!10444-106F3;0.0129332!10444-106F3;0.324858!10485-107A8;0.392937!10413-106B8;0.0274487!10175-103C4;0.00704966!10161-103A8;0.000834594!12131-128D7;0.00127716!10624-108H3;0.169224!10712-109I1;0.318712!10205-103F7;0.0182837!10206-103F8;0.0088844!10207-103F9;0.0131485!10050-101G5;0.0777461!10051-101G6;0.0760034!10016-101C7;0.0349942!10046-101G1;0.0379968!10778-110G4;0.0226692!10633-108I3;0.146487!10818-111B8;0.197639!10819-111B9;0.000592004!10820-111C1;0.000794661!10484-107A7;0.000942827!10808-111A7;0.0754148!10169-103B7;0.0289005!10153-102I9;0.000599355!13425-144D5;0.000469693!13433-144E4;0.324437!13437-144E8;0.438786!11904-125F5;0.297092!11905-125F6;0.0159636!10039-101F3;0.0262871!10791-110H8;0.000178714!10017-101C8;0.00463523!10045-101F9;0.00675794!10509-107D5;0.00507278!10839-111E2;0.00498636!10692-109F8;0.00560836!10079-102A7;0.027757!10078-102A6;0.00821731!10721-110A1;0.0353782!10569-108B2;0.0397077!10570-108B3;0.16054!10571-108B4;0.107735!10647-109A8;0.0322264!10752-110D5;0.0799753!10782-110G8;0.00577829!10726-110A6;0.777262!10018-101C9;0.011171!10086-102B5;0.254179!10182-103D2;0.278369!10165-103B3;0.000311956!10499-107C4;0.000803503!10408-106B3;0.00301361!10019-101D1;0.00345125!10068-101I5;0.042953!10075-102A3;0.0239418!10077-102A5;0.0179802!10727-110A7;0.0464118!10775-110G1;0.0095538!10412-106B7;0.0432975!12231-129F8;0.18405!12232-129F9;0.0320871!12233-129G1;0.0257611!12234-129G2;0.0212238!10414-106B9;0.0395032!10170-103B8;0.0112233!10183-103D3;0.000298317!10150-102I6;0.000143702!10174-103C3;0.000214782!10155-103A2;0.00135502!10038-101F2;0.000888537!10838-111E1;0.000504519!10759-110E3;0.563582!10514-107E1;0.0840237!10465-106H6;6.29667e-05!10691-109F7;0.00105504!10843-111E6;0.00100718!10844-111E7;0.352853!11747-123G1;0.874344!11748-123G2;0.479608!11749-123G3;0.357119!11750-123G4;0.977804!11751-123G5;0.78206!11840-124H4;0.257969!11752-123G6;0.294037!11753-123G7;0.562516!11754-123G8;0.940681!11755-123G9;0.837762!11756-123H1;0.115413!11833-124G6;0.701308!11760-123H5;0.160958!11836-124G9;0.598211!11758-123H3;0.0169992!11835-124G8;0.229938!11762-123H7;0.164506!11838-124H2;0.917853!11757-123H2;0.169221!11759-123H4;0.975951!11761-123H6;0.682775!11842-124H6;0.855473!11837-124H1;0.544403!10568-108B1;0.176129!13230-141I8;0.960303!13231-141I9;0.0556675!10696-109G3;0.0834742!10493-107B7;0.151509!10494-107B8;0.00353497!10850-111F4;0.056216!10851-111F5;0.000757084!10852-111F6;0.134169!10853-111F7;0.0873992!10854-111F8;0.00309942!10855-111F9;0.137558!10856-111G1;0.19202!10847-111F1;0.123043!10846-111E9;0.380684!10848-111F2;0.0416897!10845-111E8;0.00180711!10857-111G2;0.000854246!10858-111G3;0.0157934!10156-103A3;0.0229831!11901-125F2;0.000192317!11902-125F3;0.000844236!11903-125F4;0.000935148!10689-109F5;0.000879701!10648-109A9;0.00469838!10784-110H1;0.127962!10744-110C6;0.000403773!10772-110F7;0.0243626!10474-106I6;0.0288781!10600-108E6;0.123702!10684-109E9;0.053626!12226-129F3;0.0514491!12227-129F4;0.00303496!10508-107D4;0.0546611!10539-107G8;0.694709!10607-108F4;0.470126!10555-107I6;0.104991!10774-110F9;0.682216!10637-108I7;0.0357307!10663-109C6;0.166807!10728-110A8;0.352731!10729-110A9;0.133806!10430-106D7;0.191618!10730-110B1;0.0152417!10813-111B3;0.668922!10812-111B2;0.461559!10037-101F1;0.326175!10172-103C1;0.000200766!10163-103B1;0.000868646!10076-102A4;0.000275472!10073-102A1;0.000209318!10036-101E9;0.0114662!10195-103E6;0.00022702!10277-104E7;0.000179027!10434-106E2;0.00557744!10550-107I1;0.0361701!10545-107H5;0.0565201!10544-107H4;0.00984158!10704-109H2;0.00687932!10510-107D6;0.41795!10558-107I9;0.094168!10020-101D2;0.281532!10732-110B3;0.0140384!10049-101G4;0.16737!10698-109G5;0.0706055!10437-106E5;0.017192!10417-106C3;0.0399544!10035-101E8;0.000523308!10171-103B9;0.000190761!10157-103A4;0.000303457!10034-101E7;0.000151198!10072-101I9;0.000165436!10199-103F1;0.0114708!10200-103F2;0.0100089!10697-109G4;0.00656331!10723-110A3;0.278544!10179-103C8;0.275123!10160-103A7;0.000158603!10180-103C9;0.000155603!10162-103A9;8.14687e-05!10021-101D3;0.00072883!10840-111E3;0.0564392!10706-109H4;0.00772607!10033-101E6;0.0135194!10032-101E5;0.000327415!10490-107B4;0.000147983!10439-106E7;0.00238168!10022-101D4;0.0462719!10176-103C5;0.00399182!10469-106I1;0.000552899!10067-101I4;0.0222899!10411-106B6;0.00547382!10471-106I3;0.0314574!10030-101E3;0.00340634!10475-106I7;0.00120563!10787-110H4;0.125067!10477-106I9;0.0429697!10695-109G2;0.50752!11771-123I7;0.0947889!11772-123I8;0.0390198!11773-123I9;0.166708!10093-102C3;0.441311!10442-106F1;0.0281392!10442-106F1;0.022832!10201-103F3;0.0360776!10639-108I9;0.00225205!11843-124H7;0.165392!11841-124H5;0.0131854!10693-109F9;0.0479506!10436-106E4;0.0135668!10483-107A6;0.00256462!10282-104F3;0.00151932!10023-101D5;0.0863844!10066-101I3;0.029329!10065-101I2;0.00748157!10800-110I8;0.0235936!10610-108F7;0.216213!10841-111E4;0.366654!10541-107H1;0.192178!10842-111E5;0.221779!10562-108A4;0.535916!10024-101D6;0.277283!10064-101I1;0.0586889!10609-108F6;0.0440019!10048-101G3;0.36848!10781-110G7;0.00290549!10181-103D1;0.841256!10159-103A6;0.000553675!10056-101H2;0.00259527!10737-110B8;0.000733515!10025-101D7;0.328941!10044-101F8;0.0969161!10424-106D1;0.0684393!10463-106H4;0.00255108!10616-108G4;0.0171698!10486-107A9;0.00530786!10062-101H8;0.0108421!10202-103F4;0.0341694!10158-103A5;0.0320195!10441-106E9;0.00323895!10031-101E4;0.151131!10063-101H9;0.000165214!10063-101H9;0.00867323!11763-123H8;0.00560314!11765-123I1;0.128387!11768-123I4;0.163792!10807-111A6;0.136966!10790-110H7;0.0521322!10798-110I6;0.0884426!10786-110H3;0.099223!10591-108D6;0.0681932!10593-108D8;0.0383166!10590-108D5;0.0623499!10026-101D8;0.00597399!10096-102C6;0.0550739!10168-103B6;0.693385!10154-103A1;0.000882262!10209-103G2;0.000805351!10061-101H7;0.023236!10027-101D9;0.0145542!10043-101F7;0.362694!10783-110G9;0.533913!10028-101E1;0.155961!10060-101H6;0.104544!10203-103F5;0.035309!10059-101H5;0.0508312!10047-101G2;0.0791762!10029-101E2;0.125398!10058-101H4;0.0345531!10418-106C4;0.00965215!10492-107B6;0.0875828!10694-109G1;0.00566881!10797-110I5;0.569028!10057-101H3;0.0137261!10100-102D1;0.0271724!10055-101H1;0.0104017!10204-103F6;0.0215624!10191-103E2;0.0129699!10563-108A5;0.0188889
|name=CNhs12839_bu_f2
|name=CNhs12839_bu_f2
|tomtom_result=Hand1::Tcfe2a#MA0092.1;2;0.00895115;4.26075;1;8;GGCAGAGC;ATGCCAGACC;-!SOK2#MA0385.1;3;0.0107876;5.13491;1;8;GGCAGAGC;ACCTGCAGGCA;+!Trl#MA0205.1;0;0.0130973;6.23433;1;8;GGCAGAGC;GAGAGAGCAA;-!TLX1::NFIC#MA0119.1;1;0.0152933;7.27962;1;8;GGCAGAGC;TGGCACCATGCCAA;+!REST#MA0138.2;11;0.0174704;8.31592;1;8;GGCAGAGC;TCAGCACCATGGACAGCGC;-!REST#MA0138.2;12;0.0187727;8.93581;1;8;GGCAGAGC;TTCAGCACCATGGACAGCGCC;+!CHA4#MA0283.1;0;0.0209692;9.98133;1;8;GGCAGAGC;GGCGGAGA;+
}}
}}

Latest revision as of 13:29, 7 September 2012

Full Name: CNhs12839_bu_f2

Motif matrix
POACGT
1954.8001555623164696.14900610500251244.637605941966455.9361895556583
2947.211970043356723.8044704563796372325.594049148414354.91246751678639
35.4640320977530023335.13086087168775.4640320977530025.464032097753002
43351.52295716494650.00.00.0
59.7254182483539799.7254182483539793322.3467024198859.725418248353979
61745.82479271603421171.4266497373399355.1215086055322679.15000610603599
7809.4847483877983980.60532788577391323.860855985203237.5720249061689
8716.91958580038251363.2393439697285662.51380679044608.8502206043934

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Hand1::Tcfe2a#MA0092.120.008951154.2607518GGCAGAGCATGCCAGACC-
SOK2#MA0385.130.01078765.1349118GGCAGAGCACCTGCAGGCA+
Trl#MA0205.100.01309736.2343318GGCAGAGCGAGAGAGCAA-
TLX1::NFIC#MA0119.110.01529337.2796218GGCAGAGCTGGCACCATGCCAA+
REST#MA0138.2110.01747048.3159218GGCAGAGCTCAGCACCATGGACAGCGC-
REST#MA0138.2120.01877278.9358118GGCAGAGCTTCAGCACCATGGACAGCGCC+
CHA4#MA0283.100.02096929.9813318GGCAGAGCGGCGGAGA+
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