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MacroAPE 1083:TTCGTTCC,motif579: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;1.283;1.283;93.659;1186.775!2;1.283;160.375;1.283;1120.059!3;409.277;614.557;257.883;1.283!4;1.283;78.263;1202.171;1.283!5;78.263;1.283;1.28...")
 
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-129A6;0.00106483!10809-111A8;0.00116256!10597-108E3;0.414185!10717-109I6;0.180503!10455-106G5;0.334074!10534-107G3;0.300641!10429-106D6;0.466257!10464-106H5;0.536898!10827-111C8;0.383016!10789-110H6;0.0248986!10828-111C9;0.00555431!10788-110H5;0.00272744!10792-110H9;0.143082!10765-110E9;0.0083269!10829-111D1;0.014593!10830-111D2;0.238408!10831-111D3;0.0418472!10832-111D4;0.0164403!10833-111D5;0.190486!10764-110E8;0.152714!10770-110F5;0.104891!10399-106A3;0.0116622!10400-106A4;0.158449!10405-106A9;0.0826622!10834-111D6;0.11509!10835-111D7;0.0299001!10836-111D8;0.999622!10837-111D9;0.675386!10699-109G6;0.150174!10802-111A1;0.0881979!10796-110I4;0.555582!10010-101C1;0.11534!10810-111A9;0.301787!10421-106C7;0.152727!10708-109H6;0.0788429!12235-129G3;0.247861!12236-129G4;0.278838!12237-129G5;0.294841!10167-103B5;0.162453!10151-102I7;0.137605!10428-106D5;0.225303!10795-110I3;0.110162!10805-111A4;0.983535!10052-101G7;0.172641!10189-103D9;0.607324!10589-108D4;0.502403!10425-106D2;0.0186225!10427-106D4;0.28738!10702-109G9;0.623546!10432-106D9;0.8169!10496-107C1;0.52407!10718-109I7;0.334607!10011-101C2;0.15803!10053-101G8;0.818145!10686-109F2;7.99944e-05!10084-102B3;0.975162!10012-101C3;0.169411!10085-102B4;0.212413!10482-107A5;0.096471!10419-106C5;0.0449649!10080-102A8;0.385031!10760-110E4;0.736175!10709-109H7;0.521938!10710-109H8;0.730501!10703-109H1;0.264467!10719-109I8;0.0744935!10642-109A3;0.468551!10177-103C6;0.0453492!10164-103B2;0.0873944!10173-103C2;0.129319!10166-103B4;0.0578493!10083-102B2;0.0901129!10188-103D8;0.0762041!10552-107I3;0.0766908!10553-107I4;0.715715!10013-101C4;0.101251!10536-107G5;0.702234!10618-108G6;0.026021!10423-106C9;0.627177!10785-110H2;0.376954!12238-129G6;0.243639!12239-129G7;0.301649!12240-129G8;0.253456!10416-106C2;0.635068!10801-110I9;0.338213!10766-110F1;0.0202373!10824-111C5;0.10489!10825-111C6;0.823878!10826-111C7;0.802085!10454-106G4;0.643843!10409-106B4;0.964881!10638-108I8;0.0674033!10636-108I6;0.666704!10513-107D9;0.121374!10420-106C6;0.0420502!10082-102B1;0.466984!10014-101C5;0.560551!10070-101I7;0.483837!10452-106G2;0.64739!10453-106G3;0.949929!10449-106F8;0.966497!10042-101F6;0.956143!10069-101I6;0.404624!10193-103E4;0.921648!10631-108I1;0.134845!10438-106E6;0.628632!10488-107B2;0.390113!10196-103E7;0.551708!10071-101I8;0.303277!10071-101I8;0.365072!10041-101F5;0.101354!10451-106G1;0.407323!10450-106F9;0.147314!10604-108F1;0.105032!10605-108F2;0.729664!10606-108F3;0.934406!10603-108E9;0.998207!10497-107C2;0.902605!10448-106F7;0.013681!10643-109A4;0.685979!10426-106D3;0.0355614!10431-106D8;0.838796!10197-103E8;0.700328!10443-106F2;0.617809!10815-111B5;0.58688!10816-111B6;0.439331!10817-111B7;0.510783!10015-101C6;0.457141!10410-106B5;0.759857!10054-101G9;0.380717!10758-110E2;0.0832525!10711-109H9;0.065402!10040-101F4;0.980359!10470-106I2;0.205875!10415-106C1;0.108478!10198-103E9;0.807566!10614-108G2;0.820695!10612-108F9;0.0943042!10549-107H9;0.0845058!10615-108G3;0.151748!10487-107B1;0.0368357!10433-106E1;0.895737!10688-109F4;0.572556!10444-106F3;0.225753!10444-106F3;0.474608!10485-107A8;0.697329!10413-106B8;0.347975!10175-103C4;0.13559!10161-103A8;0.114198!12131-128D7;0.322313!10624-108H3;0.123148!10712-109I1;0.0553119!10205-103F7;0.534563!10206-103F8;0.875249!10207-103F9;0.813954!10050-101G5;0.980898!10051-101G6;0.265646!10016-101C7;0.606773!10046-101G1;0.893915!10778-110G4;0.87076!10633-108I3;0.174312!10818-111B8;0.00761726!10819-111B9;0.0338928!10820-111C1;0.0297834!10484-107A7;0.0344308!10808-111A7;0.0300087!10169-103B7;0.760849!10153-102I9;0.193092!13425-144D5;0.240292!13433-144E4;0.0774622!13437-144E8;0.0441999!11904-125F5;0.0524946!11905-125F6;0.0993714!10039-101F3;0.458565!10791-110H8;0.211235!10017-101C8;0.193998!10045-101F9;0.605712!10509-107D5;0.579774!10839-111E2;0.53654!10692-109F8;0.428946!10079-102A7;0.241768!10078-102A6;0.784841!10721-110A1;0.995907!10569-108B2;0.206413!10570-108B3;0.51132!10571-108B4;0.625267!10647-109A8;0.649218!10752-110D5;0.275748!10782-110G8;0.255391!10726-110A6;0.139309!10018-101C9;0.438256!10086-102B5;0.644363!10182-103D2;0.443704!10165-103B3;0.154614!10499-107C4;0.183266!10408-106B3;0.0272986!10019-101D1;0.0368517!10068-101I5;0.700045!10075-102A3;0.791592!10077-102A5;0.405649!10727-110A7;0.0118451!10775-110G1;0.468591!10412-106B7;0.671659!12231-129F8;0.950621!12232-129F9;0.448141!12233-129G1;0.963278!12234-129G2;0.678085!10414-106B9;0.784989!10170-103B8;0.0315392!10183-103D3;0.114243!10150-102I6;0.133723!10174-103C3;0.174812!10155-103A2;0.163249!10038-101F2;0.23931!10838-111E1;0.360051!10759-110E3;0.207129!10514-107E1;0.792124!10465-106H6;0.348142!10691-109F7;0.438662!10843-111E6;0.888368!10844-111E7;0.0653963!11747-123G1;0.0976594!11748-123G2;0.396522!11749-123G3;0.108123!11750-123G4;0.271093!11751-123G5;0.490731!11840-124H4;0.163345!11752-123G6;0.943761!11753-123G7;0.189664!11754-123G8;0.348782!11755-123G9;0.940722!11756-123H1;0.837712!11833-124G6;0.91783!11760-123H5;0.328367!11836-124G9;0.312536!11758-123H3;0.368037!11835-124G8;0.665946!11762-123H7;0.293852!11838-124H2;0.18133!11757-123H2;0.153825!11759-123H4;0.984845!11761-123H6;0.465625!11842-124H6;0.308122!11837-124H1;0.22402!10568-108B1;0.239457!13230-141I8;0.979617!13231-141I9;0.835657!10696-109G3;0.672499!10493-107B7;0.749273!10494-107B8;0.524916!10850-111F4;0.0650395!10851-111F5;0.000384099!10852-111F6;0.160398!10853-111F7;0.241717!10854-111F8;0.25536!10855-111F9;0.0696917!10856-111G1;0.120615!10847-111F1;0.00558439!10846-111E9;0.56765!10848-111F2;0.330247!10845-111E8;0.533266!10857-111G2;0.0156666!10858-111G3;0.0196531!10156-103A3;0.300669!11901-125F2;0.186525!11902-125F3;0.63406!11903-125F4;0.461747!10689-109F5;0.476087!10648-109A9;0.269942!10784-110H1;0.00529137!10744-110C6;0.270626!10772-110F7;0.00794567!10474-106I6;0.0706757!10600-108E6;0.238961!10684-109E9;0.492612!12226-129F3;0.646194!12227-129F4;0.251673!10508-107D4;0.903455!10539-107G8;0.0952934!10607-108F4;0.0165899!10555-107I6;0.0454775!10774-110F9;0.0527982!10637-108I7;0.562321!10663-109C6;0.513752!10728-110A8;0.278801!10729-110A9;0.477614!10430-106D7;0.271876!10730-110B1;0.23794!10813-111B3;0.0595381!10812-111B2;0.115523!10037-101F1;0.162946!10172-103C1;0.213486!10163-103B1;0.123943!10076-102A4;0.22624!10073-102A1;0.197543!10036-101E9;0.123674!10195-103E6;0.170489!10277-104E7;0.151791!10434-106E2;0.304024!10550-107I1;0.521433!10545-107H5;0.100014!10544-107H4;0.587249!10704-109H2;0.33088!10510-107D6;0.728877!10558-107I9;0.935426!10020-101D2;0.207848!10732-110B3;0.609921!10049-101G4;0.993646!10698-109G5;0.113934!10437-106E5;0.449191!10417-106C3;0.557944!10035-101E8;0.635466!10171-103B9;0.160824!10157-103A4;0.125435!10034-101E7;0.186602!10072-101I9;0.207716!10199-103F1;0.0997287!10200-103F2;0.697096!10697-109G4;0.783473!10723-110A3;0.795922!10179-103C8;0.106223!10160-103A7;0.171287!10180-103C9;0.193826!10162-103A9;0.0805726!10021-101D3;0.131237!10840-111E3;0.987552!10706-109H4;0.250086!10033-101E6;0.897551!10032-101E5;0.228081!10490-107B4;0.203666!10439-106E7;0.564125!10022-101D4;0.865401!10176-103C5;0.598578!10469-106I1;0.129751!10067-101I4;0.259216!10411-106B6;0.460183!10471-106I3;0.18926!10030-101E3;0.398382!10475-106I7;0.314762!10787-110H4;0.310427!10477-106I9;0.335227!10695-109G2;0.200137!11771-123I7;0.099857!11772-123I8;0.362828!11773-123I9;0.000877941!10093-102C3;0.0082487!10442-106F1;0.513441!10442-106F1;0.224413!10201-103F3;0.150348!10639-108I9;0.304089!11843-124H7;0.00539966!11841-124H5;0.270859!10693-109F9;0.705727!10436-106E4;0.0111555!10483-107A6;0.833985!10282-104F3;0.346973!10023-101D5;0.581707!10066-101I3;0.957535!10065-101I2;0.854394!10800-110I8;0.528425!10610-108F7;0.10283!10841-111E4;0.0115999!10541-107H1;0.153733!10842-111E5;0.324971!10562-108A4;0.232701!10024-101D6;0.236706!10064-101I1;0.576512!10609-108F6;0.281663!10048-101G3;0.0397255!10781-110G7;0.645952!10181-103D1;0.0043452!10159-103A6;0.314241!10056-101H2;0.608424!10737-110B8;0.106397!10025-101D7;0.488035!10044-101F8;0.0203121!10424-106D1;0.0328787!10463-106H4;0.316879!10616-108G4;0.306205!10486-107A9;0.91541!10062-101H8;0.814667!10202-103F4;0.478878!10158-103A5;0.973451!10441-106E9;0.597683!10031-101E4;0.382636!10063-101H9;0.177447!10063-101H9;0.0980395!11763-123H8;0.247022!11765-123I1;0.27298!11768-123I4;0.398077!10807-111A6;0.59483!10790-110H7;0.0771157!10798-110I6;0.127317!10786-110H3;0.430769!10591-108D6;0.558667!10593-108D8;0.124845!10590-108D5;0.303246!10026-101D8;0.286138!10096-102C6;0.320128!10168-103B6;0.0247348!10154-103A1;0.128792!10209-103G2;0.295093!10061-101H7;0.918293!10027-101D9;0.720451!10043-101F7;0.00176275!10783-110G9;0.0189295!10028-101E1;0.512724!10060-101H6;0.847632!10203-103F5;0.967388!10059-101H5;0.924472!10047-101G2;0.634298!10029-101E2;0.215636!10058-101H4;0.959972!10418-106C4;0.448571!10492-107B6;0.652478!10694-109G1;0.552152!10797-110I5;0.102138!10057-101H3;0.358455!10100-102D1;0.202994!10055-101H1;0.930154!10204-103F6;0.27305!10191-103E2;0.753207!10563-108A5;0.299193
|name=TTCGTTCC,motif579,CNhs13494,T:1283.0(22.19%),B:12918.6(16.29%),P:1e-30
|name=TTCGTTCC,motif579,CNhs13494,T:1283.0(22.19%),B:12918.6(16.29%),P:1e-30
|tomtom_result=EWSR1-FLI1#MA0149.1;6;0.00294544;1.40203;1;8;TTCGTTCC;CCTTCCTTCCTTCCTTCC;-!SPI1#MA0080.1;-3;0.00608635;2.8971;1;5;TTCGTTCC;CTTCCG;-!YBR239C#MA0420.1;-3;0.0115925;5.51805;1;5;TTCGTTCC;GTTCCGGT;-!HSF1#MA0319.1;-2;0.0121684;5.79217;1;6;TTCGTTCC;TGTTCCAT;-!RDR1#MA0360.1;-3;0.0147034;6.99881;1;5;TTCGTTCC;GTTCCGCA;-!YRR1#MA0439.1;1;0.0191179;9.10014;1;8;TTCGTTCC;CTTATCTCCGC;+!SPT23#MA0388.1;0;0.0202303;9.62962;1;8;TTCGTTCC;TTGATTTC;-!ELF5#MA0136.1;-1;0.0203249;9.67465;1;7;TTCGTTCC;TACTTCCTT;+
}}
}}

Latest revision as of 13:38, 7 September 2012

Full Name: TTCGTTCC,motif579,CNhs13494,T:1283.0(22.19%),B:12918.6(16.29%),P:1e-30

Motif matrix
POACGT
11.2831.28393.6591186.775
21.283160.3751.2831120.059
3409.277614.557257.8831.283
41.28378.2631202.1711.283
578.2631.2831.2831202.171
61.2831.283192.451087.984
71.2831279.1511.2831.283
81.2831279.1511.2831.283

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
EWSR1-FLI1#MA0149.160.002945441.4020318TTCGTTCCCCTTCCTTCCTTCCTTCC-
SPI1#MA0080.1-30.006086352.897115TTCGTTCCCTTCCG-
YBR239C#MA0420.1-30.01159255.5180515TTCGTTCCGTTCCGGT-
HSF1#MA0319.1-20.01216845.7921716TTCGTTCCTGTTCCAT-
RDR1#MA0360.1-30.01470346.9988115TTCGTTCCGTTCCGCA-
YRR1#MA0439.110.01911799.1001418TTCGTTCCCTTATCTCCGC+
SPT23#MA0388.100.02023039.6296218TTCGTTCCTTGATTTC-
ELF5#MA0136.1-10.02032499.6746517TTCGTTCCTACTTCCTT+
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