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MacroAPE 1083:Motif CCANGT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;118768;0;0!02;0;118768;0;0!03;118768;0;0;0!04;29692;29692;29692;29692!05;0;0;118768;0!06;0;0;0;118768 |macroape_1083_sample_pvalues=1137...")
 
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068!10534-107G3;0.439884!10429-106D6;0.787954!10464-106H5;0.687994!10827-111C8;0.488355!10789-110H6;0.174271!10828-111C9;0.478953!10788-110H5;0.574238!10792-110H9;0.479276!10765-110E9;0.486134!10829-111D1;0.98381!10830-111D2;0.151345!10831-111D3;0.548212!10832-111D4;0.981066!10833-111D5;0.796575!10764-110E8;0.590778!10770-110F5;0.799224!10399-106A3;0.847207!10400-106A4;0.595055!10405-106A9;0.690082!10834-111D6;0.709601!10835-111D7;0.334375!10836-111D8;0.47342!10837-111D9;0.888603!10699-109G6;0.894726!10802-111A1;0.837045!10796-110I4;0.807863!10010-101C1;0.0286891!10810-111A9;0.221402!10421-106C7;0.960318!10708-109H6;0.506475!12235-129G3;0.832616!12236-129G4;0.0161663!12237-129G5;0.0289743!10167-103B5;0.0263082!10151-102I7;0.0544767!10428-106D5;0.0422093!10795-110I3;0.496757!10805-111A4;0.399211!10052-101G7;0.591158!10189-103D9;0.520436!10589-108D4;0.591517!10425-106D2;0.0209296!10427-106D4;0.146575!10702-109G9;0.086927!10432-106D9;0.865324!10496-107C1;0.0191676!10718-109I7;0.00801769!10011-101C2;0.673135!10053-101G8;0.445607!10686-109F2;0.135859!10084-102B3;0.462151!10012-101C3;0.093152!10085-102B4;0.0794879!10482-107A5;0.0303203!10419-106C5;0.0875074!10080-102A8;0.057646!10760-110E4;0.47013!10709-109H7;0.00495644!10710-109H8;0.00909114!10703-109H1;0.030173!10719-109I8;0.360985!10642-109A3;0.355943!10177-103C6;0.172954!10164-103B2;0.0409573!10173-103C2;0.0521037!10166-103B4;0.0695676!10083-102B2;0.050638!10188-103D8;0.11267!10552-107I3;0.113455!10553-107I4;0.0481587!10013-101C4;0.022367!10536-107G5;0.472029!10618-108G6;0.881243!10423-106C9;0.129447!10785-110H2;0.0176779!12238-129G6;0.0765105!12239-129G7;0.0105912!12240-129G8;0.0058565!10416-106C2;0.00647679!10801-110I9;0.370581!10766-110F1;0.550546!10824-111C5;0.495396!10825-111C6;0.353338!10826-111C7;0.351417!10454-106G4;0.347002!10409-106B4;0.276932!10638-108I8;0.801423!10636-108I6;0.0590343!10513-107D9;0.0178289!10420-106C6;0.0239539!10082-102B1;0.222076!10014-101C5;0.568746!10070-101I7;0.85134!10452-106G2;0.880542!10453-106G3;0.749626!10449-106F8;0.763386!10042-101F6;0.856245!10069-101I6;0.0577401!10193-103E4;0.386096!10631-108I1;0.0746416!10438-106E6;0.603126!10488-107B2;0.0083129!10196-103E7;0.111658!10071-101I8;0.719882!10071-101I8;0.81404!10041-101F5;0.0282526!10451-106G1;0.126657!10450-106F9;0.349709!10604-108F1;0.503421!10605-108F2;0.734101!10606-108F3;0.961675!10603-108E9;0.741272!10497-107C2;0.712802!10448-106F7;0.0158345!10643-109A4;0.178092!10426-106D3;0.0359548!10431-106D8;0.0372804!10197-103E8;0.0649768!10443-106F2;0.949373!10815-111B5;0.736598!10816-111B6;0.0896402!10817-111B7;0.151591!10015-101C6;0.0919105!10410-106B5;0.617887!10054-101G9;0.738085!10758-110E2;0.422445!10711-109H9;0.297067!10040-101F4;0.848361!10470-106I2;0.0749907!10415-106C1;0.0268838!10198-103E9;0.012293!10614-108G2;0.753281!10612-108F9;0.0437285!10549-107H9;0.0164557!10615-108G3;0.454041!10487-107B1;0.665544!10433-106E1;0.0495055!10688-109F4;0.702675!10444-106F3;0.0263998!10444-106F3;0.0991734!10485-107A8;0.0738862!10413-106B8;0.260025!10175-103C4;0.689329!10161-103A8;0.0376263!12131-128D7;0.0268184!10624-108H3;0.910976!10712-109I1;0.431629!10205-103F7;0.838905!10206-103F8;0.144591!10207-103F9;0.124061!10050-101G5;0.103645!10051-101G6;0.396587!10016-101C7;0.263597!10046-101G1;0.123887!10778-110G4;0.101459!10633-108I3;0.244436!10818-111B8;0.0828508!10819-111B9;0.0267862!10820-111C1;0.0206668!10484-107A7;0.0252356!10808-111A7;0.449585!10169-103B7;0.240258!10153-102I9;0.0444399!13425-144D5;0.0401616!13433-144E4;0.0666736!13437-144E8;0.095055!11904-125F5;0.0639423!11905-125F6;0.615337!10039-101F3;0.414912!10791-110H8;0.0782837!10017-101C8;0.00999668!10045-101F9;0.333298!10509-107D5;0.784646!10839-111E2;0.353559!10692-109F8;0.260325!10079-102A7;0.0779052!10078-102A6;0.212902!10721-110A1;0.185888!10569-108B2;0.617908!10570-108B3;0.606745!10571-108B4;0.811301!10647-109A8;0.48947!10752-110D5;0.456664!10782-110G8;0.688161!10726-110A6;0.47259!10018-101C9;0.472747!10086-102B5;0.022707!10182-103D2;0.110337!10165-103B3;0.0411553!10499-107C4;0.0467747!10408-106B3;0.0188273!10019-101D1;0.0284557!10068-101I5;0.994224!10075-102A3;0.36243!10077-102A5;0.987901!10727-110A7;0.402573!10775-110G1;0.0289438!10412-106B7;0.200573!12231-129F8;0.0106277!12232-129F9;0.220902!12233-129G1;0.142505!12234-129G2;0.29927!10414-106B9;0.199626!10170-103B8;0.032592!10183-103D3;0.0623502!10150-102I6;0.0673217!10174-103C3;0.0542984!10155-103A2;0.0979836!10038-101F2;0.0688828!10838-111E1;0.0870423!10759-110E3;0.579137!10514-107E1;0.722722!10465-106H6;0.641218!10691-109F7;0.189441!10843-111E6;0.105231!10844-111E7;0.986747!11747-123G1;0.872147!11748-123G2;0.570865!11749-123G3;0.593707!11750-123G4;0.993167!11751-123G5;0.86!11840-124H4;0.644105!11752-123G6;0.532514!11753-123G7;0.491459!11754-123G8;0.634796!11755-123G9;0.474499!11756-123H1;0.569458!11833-124G6;0.372635!11760-123H5;0.565557!11836-124G9;0.47203!11758-123H3;0.150355!11835-124G8;0.589372!11762-123H7;0.981069!11838-124H2;0.906147!11757-123H2;0.895391!11759-123H4;0.353394!11761-123H6;0.625849!11842-124H6;0.680216!11837-124H1;0.251386!10568-108B1;0.543542!13230-141I8;0.269162!13231-141I9;0.839789!10696-109G3;0.835752!10493-107B7;0.0158094!10494-107B8;0.504319!10850-111F4;0.208933!10851-111F5;0.153883!10852-111F6;0.223268!10853-111F7;0.298967!10854-111F8;0.372944!10855-111F9;0.822416!10856-111G1;0.0931802!10847-111F1;0.193214!10846-111E9;0.987907!10848-111F2;0.254978!10845-111E8;0.463261!10857-111G2;0.20873!10858-111G3;0.426225!10156-103A3;0.460213!11901-125F2;0.047234!11902-125F3;0.36564!11903-125F4;0.605049!10689-109F5;0.584792!10648-109A9;0.748471!10784-110H1;0.227157!10744-110C6;0.0357069!10772-110F7;0.967552!10474-106I6;0.343261!10600-108E6;0.136629!10684-109E9;0.10452!12226-129F3;0.142077!12227-129F4;0.00469471!10508-107D4;0.0765196!10539-107G8;0.315615!10607-108F4;0.0495297!10555-107I6;0.402095!10774-110F9;0.12495!10637-108I7;0.578001!10663-109C6;0.0996755!10728-110A8;0.0804474!10729-110A9;0.378461!10430-106D7;0.46237!10730-110B1;0.903314!10813-111B3;0.999272!10812-111B2;0.53498!10037-101F1;0.657634!10172-103C1;0.0803294!10163-103B1;0.0638708!10076-102A4;0.0387123!10073-102A1;0.0926778!10036-101E9;0.0197969!10195-103E6;0.094481!10277-104E7;0.0650664!10434-106E2;0.0278105!10550-107I1;0.00964519!10545-107H5;0.0408832!10544-107H4;0.00868317!10704-109H2;0.0243891!10510-107D6;0.853503!10558-107I9;0.507017!10020-101D2;0.98904!10732-110B3;0.198009!10049-101G4;0.60998!10698-109G5;0.000222386!10437-106E5;0.0422652!10417-106C3;0.255457!10035-101E8;0.0306743!10171-103B9;0.0819683!10157-103A4;0.0493691!10034-101E7;0.0533167!10072-101I9;0.0770979!10199-103F1;0.0229696!10200-103F2;0.00561754!10697-109G4;0.701794!10723-110A3;0.650654!10179-103C8;0.00700743!10160-103A7;0.0654791!10180-103C9;0.069438!10162-103A9;0.692136!10021-101D3;0.576887!10840-111E3;0.355915!10706-109H4;0.276777!10033-101E6;0.263399!10032-101E5;0.0842551!10490-107B4;0.0920491!10439-106E7;0.103907!10022-101D4;0.0352049!10176-103C5;0.577865!10469-106I1;0.0595171!10067-101I4;0.0494956!10411-106B6;0.216089!10471-106I3;0.119644!10030-101E3;0.0907198!10475-106I7;0.146464!10787-110H4;0.85519!10477-106I9;0.442893!10695-109G2;0.210838!11771-123I7;0.0370336!11772-123I8;0.00637275!11773-123I9;0.0033821!10093-102C3;0.359557!10442-106F1;0.016966!10442-106F1;0.954961!10201-103F3;0.862038!10639-108I9;0.677431!11843-124H7;0.0049027!11841-124H5;0.423898!10693-109F9;0.876399!10436-106E4;0.0386296!10483-107A6;0.0125123!10282-104F3;0.0206826!10023-101D5;0.519443!10066-101I3;0.565703!10065-101I2;0.606057!10800-110I8;0.928697!10610-108F7;0.325598!10841-111E4;0.221194!10541-107H1;0.708631!10842-111E5;0.158806!10562-108A4;0.865522!10024-101D6;0.0215238!10064-101I1;0.508286!10609-108F6;0.785029!10048-101G3;0.0256707!10781-110G7;0.0997843!10181-103D1;0.0256178!10159-103A6;0.0454968!10056-101H2;0.0348211!10737-110B8;0.0981517!10025-101D7;0.747616!10044-101F8;0.151362!10424-106D1;0.0857649!10463-106H4;0.495895!10616-108G4;0.0117781!10486-107A9;0.00957384!10062-101H8;0.0213725!10202-103F4;0.799677!10158-103A5;0.0696586!10441-106E9;0.0268807!10031-101E4;0.519541!10063-101H9;0.0917021!10063-101H9;0.0179665!11763-123H8;0.993692!11765-123I1;0.892575!11768-123I4;0.984789!10807-111A6;0.762499!10790-110H7;0.666584!10798-110I6;0.440638!10786-110H3;0.781776!10591-108D6;0.0109237!10593-108D8;0.0139145!10590-108D5;0.0141473!10026-101D8;0.0356863!10096-102C6;0.120204!10168-103B6;0.143589!10154-103A1;0.0426595!10209-103G2;0.0342687!10061-101H7;0.639609!10027-101D9;0.994248!10043-101F7;0.999639!10783-110G9;0.312942!10028-101E1;0.571737!10060-101H6;0.275747!10203-103F5;0.888428!10059-101H5;0.559366!10047-101G2;0.630905!10029-101E2;0.152213!10058-101H4;0.293033!10418-106C4;0.778941!10492-107B6;0.0426799!10694-109G1;0.105313!10797-110I5;0.00978039!10057-101H3;0.280352!10100-102D1;0.944969!10055-101H1;0.202052!10204-103F6;0.328054!10191-103E2;0.136796!10563-108A5;0.503696
|name=motif_CCANGT
|name=motif_CCANGT
|tomtom_result=EmBP-1#MA0128.1;0;0.000990644;0.471547;0.381798;6;CCAAGT;CCACGTGT;-!Myc#MA0147.1;1;0.00152741;0.727049;0.381798;6;CCAAGT;GCCACGTGCG;-!MYC::MAX#MA0059.1;1;0.00161759;0.769974;0.381798;6;CCAAGT;ACCACGTGGTC;-!USF1#MA0093.1;0;0.00163316;0.777384;0.381798;6;CCAAGT;CCACGTG;-!Mycn#MA0104.2;1;0.00201212;0.957771;0.381798;6;CCAAGT;GCCACGTGCG;-!bZIP911#MA0097.1;2;0.00371688;1.76924;0.566004;6;CCAAGT;GGCCACGTCATC;-!PHO4#MA0357.1;0;0.00477266;2.27179;0.566004;6;CCAAGT;GCACGTGC;+!MAX#MA0058.1;2;0.00574455;2.73441;0.605567;6;CCAAGT;AACCACGTGA;+!ESR1#MA0112.2;0;0.00725395;3.45288;0.625649;6;CCAAGT;CCAGGTCACCGTGACCCC;+!HAC1#MA0310.1;1;0.0109214;5.19858;0.740114;6;CCAAGT;GACACGTG;+!sna#MA0086.1;-1;0.013241;6.30272;0.785146;5;CCAAGT;CAGGTG;+!Mycn#MA0104.2;-1;0.013241;6.30272;0.785146;5;CCAAGT;CACGTG;-!Arnt#MA0004.1;-1;0.0155866;7.41923;0.821539;5;CCAAGT;CACGTG;-!HIF1A::ARNT#MA0259.1;0;0.0188355;8.9657;0.865905;6;CCAAGT;GCACGTCC;-!ESR1#MA0112.2;3;0.0201478;9.59034;0.865905;6;CCAAGT;GGCCCAGGTCACCCTGACCT;+!RIM101#MA0368.1;2;0.0203055;9.66544;0.865905;5;CCAAGT;CGCCAAG;+
}}
}}

Latest revision as of 13:41, 7 September 2012

Full Name: motif_CCANGT

Motif matrix
POACGT
01011876800
02011876800
03118768000
0429692296922969229692
05001187680
06000118768

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

EmBP-1#MA0128.100.0009906440.4715470.3817986CCAAGTCCACGTGT-
Myc#MA0147.110.001527410.7270490.3817986CCAAGTGCCACGTGCG-
MYC::MAX#MA0059.110.001617590.7699740.3817986CCAAGTACCACGTGGTC-
USF1#MA0093.100.001633160.7773840.3817986CCAAGTCCACGTG-
Mycn#MA0104.210.002012120.9577710.3817986CCAAGTGCCACGTGCG-
bZIP911#MA0097.120.003716881.769240.5660046CCAAGTGGCCACGTCATC-
PHO4#MA0357.100.004772662.271790.5660046CCAAGTGCACGTGC+
MAX#MA0058.120.005744552.734410.6055676CCAAGTAACCACGTGA+
ESR1#MA0112.200.007253953.452880.6256496CCAAGTCCAGGTCACCGTGACCCC+
HAC1#MA0310.110.01092145.198580.7401146CCAAGTGACACGTG+
sna#MA0086.1-10.0132416.302720.7851465CCAAGTCAGGTG+
Mycn#MA0104.2-10.0132416.302720.7851465CCAAGTCACGTG-
Arnt#MA0004.1-10.01558667.419230.8215395CCAAGTCACGTG-
HIF1A::ARNT#MA0259.100.01883558.96570.8659056CCAAGTGCACGTCC-
ESR1#MA0112.230.02014789.590340.8659056CCAAGTGGCCCAGGTCACCCTGACCT+
RIM101#MA0368.120.02030559.665440.8659055CCAAGTCGCCAAG+