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MacroAPE 1083:Motif830: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;85433;0;0;0!02;65418;20015;0;0!03;0;85433;0;0!04;85433;0;0;0!05;54065;0;31368;0!06;0;0;85433;0 |macroape_1083_sample_pvalues=11376-118A8;0...")
 
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09I6;0.0781369!10455-106G5;0.751445!10534-107G3;0.527155!10429-106D6;0.500749!10464-106H5;0.767562!10827-111C8;0.445943!10789-110H6;0.892566!10828-111C9;0.390564!10788-110H5;0.44978!10792-110H9;0.976461!10765-110E9;0.757761!10829-111D1;0.907515!10830-111D2;0.396067!10831-111D3;0.912251!10832-111D4;0.3485!10833-111D5;0.722047!10764-110E8;0.740053!10770-110F5;0.72667!10399-106A3;0.356585!10400-106A4;0.33909!10405-106A9;0.405927!10834-111D6;0.378997!10835-111D7;0.393793!10836-111D8;0.176407!10837-111D9;0.278517!10699-109G6;0.343002!10802-111A1;0.636718!10796-110I4;0.313712!10010-101C1;0.686785!10810-111A9;0.363052!10421-106C7;0.267597!10708-109H6;0.882491!12235-129G3;0.238529!12236-129G4;0.277688!12237-129G5;0.586124!10167-103B5;0.483839!10151-102I7;0.813148!10428-106D5;0.926827!10795-110I3;0.220976!10805-111A4;0.330101!10052-101G7;0.370401!10189-103D9;0.468557!10589-108D4;0.214481!10425-106D2;0.388585!10427-106D4;0.111669!10702-109G9;0.42722!10432-106D9;0.566602!10496-107C1;0.982782!10718-109I7;0.666753!10011-101C2;0.991997!10053-101G8;0.513006!10686-109F2;0.0293169!10084-102B3;0.123841!10012-101C3;0.894222!10085-102B4;0.959768!10482-107A5;0.565457!10419-106C5;0.464827!10080-102A8;0.782061!10760-110E4;0.416447!10709-109H7;0.615073!10710-109H8;0.769638!10703-109H1;0.867272!10719-109I8;0.119688!10642-109A3;0.059887!10177-103C6;0.00221238!10164-103B2;0.976023!10173-103C2;0.815384!10166-103B4;0.92045!10083-102B2;0.890406!10188-103D8;0.947598!10552-107I3;0.929555!10553-107I4;0.38429!10013-101C4;0.975252!10536-107G5;0.464635!10618-108G6;0.0117289!10423-106C9;0.58751!10785-110H2;0.929237!12238-129G6;0.850636!12239-129G7;0.136368!12240-129G8;0.486801!10416-106C2;0.0562661!10801-110I9;0.816005!10766-110F1;0.510053!10824-111C5;0.622546!10825-111C6;0.107461!10826-111C7;0.111251!10454-106G4;0.0912795!10409-106B4;0.0738944!10638-108I8;0.670637!10636-108I6;0.685176!10513-107D9;0.903759!10420-106C6;0.395018!10082-102B1;0.101622!10014-101C5;0.257607!10070-101I7;0.233703!10452-106G2;0.351371!10453-106G3;0.45632!10449-106F8;0.349233!10042-101F6;0.351067!10069-101I6;0.56938!10193-103E4;0.301219!10631-108I1;0.997219!10438-106E6;0.506074!10488-107B2;0.667869!10196-103E7;0.257679!10071-101I8;0.488577!10071-101I8;0.251114!10041-101F5;0.451296!10451-106G1;0.55629!10450-106F9;0.0800712!10604-108F1;0.0466626!10605-108F2;0.111977!10606-108F3;0.327838!10603-108E9;0.0904131!10497-107C2;0.120374!10448-106F7;0.937936!10643-109A4;0.031915!10426-106D3;0.910038!10431-106D8;0.975117!10197-103E8;0.996865!10443-106F2;0.381943!10815-111B5;0.107499!10816-111B6;0.239682!10817-111B7;0.262834!10015-101C6;0.279641!10410-106B5;0.151292!10054-101G9;0.0661843!10758-110E2;0.640372!10711-109H9;0.17914!10040-101F4;0.201617!10470-106I2;0.855352!10415-106C1;0.925991!10198-103E9;0.963259!10614-108G2;0.390958!10612-108F9;0.540654!10549-107H9;0.908069!10615-108G3;0.151224!10487-107B1;0.19682!10433-106E1;0.303946!10688-109F4;0.326183!10444-106F3;0.83989!10444-106F3;0.0666745!10485-107A8;0.0596952!10413-106B8;0.0129223!10175-103C4;8.07873e-06!10161-103A8;0.991584!12131-128D7;0.710147!10624-108H3;0.476507!10712-109I1;0.0563116!10205-103F7;0.199486!10206-103F8;0.722028!10207-103F9;0.539083!10050-101G5;0.333129!10051-101G6;0.0508558!10016-101C7;0.252977!10046-101G1;0.190874!10778-110G4;0.68559!10633-108I3;0.649789!10818-111B8;0.130814!10819-111B9;0.275197!10820-111C1;0.282453!10484-107A7;0.277497!10808-111A7;0.141961!10169-103B7;0.58938!10153-102I9;0.986952!13425-144D5;0.804176!13433-144E4;0.436427!13437-144E8;0.448641!11904-125F5;0.393933!11905-125F6;0.355999!10039-101F3;0.311737!10791-110H8;0.883058!10017-101C8;0.773003!10045-101F9;0.054159!10509-107D5;0.36501!10839-111E2;0.918299!10692-109F8;0.155357!10079-102A7;0.501918!10078-102A6;0.549065!10721-110A1;0.281592!10569-108B2;0.0749632!10570-108B3;0.414103!10571-108B4;0.259163!10647-109A8;0.089999!10752-110D5;0.345039!10782-110G8;0.44101!10726-110A6;0.136959!10018-101C9;0.125614!10086-102B5;0.0625198!10182-103D2;0.139568!10165-103B3;0.967811!10499-107C4;0.813028!10408-106B3;0.178049!10019-101D1;0.205245!10068-101I5;0.123627!10075-102A3;0.272869!10077-102A5;0.0745727!10727-110A7;0.0409618!10775-110G1;0.724379!10412-106B7;0.920196!12231-129F8;0.850117!12232-129F9;0.692339!12233-129G1;0.452274!12234-129G2;0.560767!10414-106B9;0.841457!10170-103B8;0.443086!10183-103D3;0.60605!10150-102I6;0.715058!10174-103C3;0.963911!10155-103A2;0.678068!10038-101F2;0.599987!10838-111E1;0.731412!10759-110E3;0.0739101!10514-107E1;0.0630748!10465-106H6;0.0791802!10691-109F7;0.0999099!10843-111E6;0.295321!10844-111E7;0.146944!11747-123G1;0.129889!11748-123G2;0.11818!11749-123G3;0.169404!11750-123G4;0.286845!11751-123G5;0.465871!11840-124H4;0.574248!11752-123G6;0.294066!11753-123G7;0.300881!11754-123G8;0.415219!11755-123G9;0.350574!11756-123H1;0.217655!11833-124G6;0.4178!11760-123H5;0.0642156!11836-124G9;0.363128!11758-123H3;0.0454348!11835-124G8;0.310483!11762-123H7;0.397664!11838-124H2;0.56591!11757-123H2;0.929346!11759-123H4;0.0996955!11761-123H6;0.25156!11842-124H6;0.973384!11837-124H1;0.089729!10568-108B1;0.350673!13230-141I8;0.0691994!13231-141I9;0.271085!10696-109G3;0.190441!10493-107B7;0.0352105!10494-107B8;0.211584!10850-111F4;0.80316!10851-111F5;0.253345!10852-111F6;0.118597!10853-111F7;0.172789!10854-111F8;0.558754!10855-111F9;0.711528!10856-111G1;0.89963!10847-111F1;0.554639!10846-111E9;0.0602973!10848-111F2;0.712885!10845-111E8;0.574839!10857-111G2;0.422226!10858-111G3;0.253836!10156-103A3;0.226316!11901-125F2;0.993939!11902-125F3;0.63847!11903-125F4;0.532238!10689-109F5;0.719603!10648-109A9;0.0820936!10784-110H1;0.0227802!10744-110C6;0.943282!10772-110F7;0.474561!10474-106I6;0.635235!10600-108E6;0.95779!10684-109E9;0.0588991!12226-129F3;0.0673447!12227-129F4;0.93759!10508-107D4;0.484153!10539-107G8;0.00879575!10607-108F4;0.000951542!10555-107I6;0.52356!10774-110F9;0.000686777!10637-108I7;0.363483!10663-109C6;0.0686853!10728-110A8;0.6892!10729-110A9;0.203669!10430-106D7;0.0280817!10730-110B1;0.790165!10813-111B3;0.00313261!10812-111B2;0.0669446!10037-101F1;0.00225688!10172-103C1;0.972395!10163-103B1;0.735347!10076-102A4;0.939509!10073-102A1;0.706386!10036-101E9;0.379618!10195-103E6;0.890059!10277-104E7;0.844714!10434-106E2;0.71027!10550-107I1;0.755613!10545-107H5;0.517583!10544-107H4;0.702407!10704-109H2;0.838232!10510-107D6;0.720173!10558-107I9;0.242485!10020-101D2;0.000380049!10732-110B3;0.780539!10049-101G4;0.0439001!10698-109G5;0.0119823!10437-106E5;0.600922!10417-106C3;0.836158!10035-101E8;0.339458!10171-103B9;0.880744!10157-103A4;0.734643!10034-101E7;0.935609!10072-101I9;0.870707!10199-103F1;0.423969!10200-103F2;0.0653964!10697-109G4;0.275628!10723-110A3;0.0548606!10179-103C8;0.739187!10160-103A7;0.853478!10180-103C9;0.857743!10162-103A9;0.986428!10021-101D3;0.90053!10840-111E3;0.0847897!10706-109H4;0.874915!10033-101E6;0.213282!10032-101E5;0.938449!10490-107B4;0.86824!10439-106E7;0.730128!10022-101D4;0.688245!10176-103C5;0.463614!10469-106I1;0.959467!10067-101I4;0.536478!10411-106B6;0.771569!10471-106I3;0.241232!10030-101E3;0.470869!10475-106I7;0.568093!10787-110H4;0.130391!10477-106I9;0.0375166!10695-109G2;0.00235598!11771-123I7;0.50432!11772-123I8;0.451331!11773-123I9;0.68788!10093-102C3;0.433762!10442-106F1;0.0101792!10442-106F1;0.384114!10201-103F3;0.375517!10639-108I9;0.357295!11843-124H7;0.415047!11841-124H5;0.186888!10693-109F9;0.324433!10436-106E4;0.798583!10483-107A6;0.951866!10282-104F3;0.749073!10023-101D5;0.18063!10066-101I3;0.107947!10065-101I2;0.73262!10800-110I8;0.371312!10610-108F7;0.0853164!10841-111E4;0.0730001!10541-107H1;0.0707043!10842-111E5;0.332983!10562-108A4;0.103818!10024-101D6;0.199722!10064-101I1;0.160849!10609-108F6;0.35157!10048-101G3;0.546377!10781-110G7;0.845208!10181-103D1;0.0762168!10159-103A6;0.903464!10056-101H2;0.628093!10737-110B8;0.872059!10025-101D7;0.111079!10044-101F8;0.0577052!10424-106D1;0.129079!10463-106H4;0.614952!10616-108G4;0.857225!10486-107A9;0.838652!10062-101H8;0.996016!10202-103F4;0.632283!10158-103A5;0.017269!10441-106E9;0.64599!10031-101E4;0.00790069!10063-101H9;0.928486!10063-101H9;0.425176!11763-123H8;0.288253!11765-123I1;0.756258!11768-123I4;0.685614!10807-111A6;0.539455!10790-110H7;0.160958!10798-110I6;0.0702831!10786-110H3;0.745448!10591-108D6;0.225753!10593-108D8;0.118842!10590-108D5;0.159789!10026-101D8;0.522319!10096-102C6;0.728472!10168-103B6;0.315405!10154-103A1;0.927622!10209-103G2;0.681137!10061-101H7;0.0760656!10027-101D9;0.472028!10043-101F7;0.00025093!10783-110G9;0.0235169!10028-101E1;0.499835!10060-101H6;0.0437096!10203-103F5;0.274813!10059-101H5;0.106847!10047-101G2;0.277257!10029-101E2;0.0102862!10058-101H4;0.0909015!10418-106C4;0.369799!10492-107B6;0.490275!10694-109G1;0.29046!10797-110I5;0.0122395!10057-101H3;0.669641!10100-102D1;0.43415!10055-101H1;0.469004!10204-103F6;0.806889!10191-103E2;0.493964!10563-108A5;0.169829
|name=motif830
|name=motif830
|tomtom_result=FOXF2#MA0030.1;8;0.0102815;4.894;1;6;AACAAG;CAAACGTAAACAAT;+!HCM1#MA0317.1;3;0.0114728;5.46105;1;5;AACAAG;ATAAACAA;+!Sox5#MA0087.1;1;0.0120816;5.75086;1;6;AACAAG;AAACAAT;+!RORA_1#MA0071.1;0;0.0156963;7.47145;1;6;AACAAG;ATCAAGGTCA;+!SRY#MA0084.1;3;0.0178461;8.49475;1;6;AACAAG;GTAAACAAT;+!AZF1#MA0277.1;0;0.0178461;8.49475;1;6;AACAAG;AAAAAGAAA;+!br_Z1#MA0010.1;6;0.0204265;9.72299;1;6;AACAAG;GTAATAAACAAATC;+
}}
}}

Latest revision as of 13:42, 7 September 2012

Full Name: motif830

Motif matrix
POACGT
0185433000
02654182001500
0308543300
0485433000
05540650313680
0600854330

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
FOXF2#MA0030.180.01028154.89416AACAAGCAAACGTAAACAAT+
HCM1#MA0317.130.01147285.4610515AACAAGATAAACAA+
Sox5#MA0087.110.01208165.7508616AACAAGAAACAAT+
RORA_1#MA0071.100.01569637.4714516AACAAGATCAAGGTCA+
SRY#MA0084.130.01784618.4947516AACAAGGTAAACAAT+
AZF1#MA0277.100.01784618.4947516AACAAGAAAAAGAAA+
br_Z1#MA0010.160.02042659.7229916AACAAGGTAATAAACAAATC+
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