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MacroAPE 1083:Motif GGCNAT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;3360;0!02;0;0;3360;0!03;0;3360;0;0!04;840;840;840;840!05;3360;0;0;0!06;0;0;0;3360 |macroape_1083_sample_pvalues=11376-118A8;0.496579!1...")
 
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0596073!10828-111C9;0.281896!10788-110H5;0.10592!10792-110H9;0.185253!10765-110E9;0.183879!10829-111D1;0.0480624!10830-111D2;0.228559!10831-111D3;0.183084!10832-111D4;0.397337!10833-111D5;0.26391!10764-110E8;0.1524!10770-110F5;0.181351!10399-106A3;0.182785!10400-106A4;0.284134!10405-106A9;0.28651!10834-111D6;0.351151!10835-111D7;0.169064!10836-111D8;0.341548!10837-111D9;0.782571!10699-109G6;0.498499!10802-111A1;0.160292!10796-110I4;0.323548!10010-101C1;0.182625!10810-111A9;0.924877!10421-106C7;0.737341!10708-109H6;0.381506!12235-129G3;0.952743!12236-129G4;0.603266!12237-129G5;0.500183!10167-103B5;0.52421!10151-102I7;0.216112!10428-106D5;0.294415!10795-110I3;0.791179!10805-111A4;0.474142!10052-101G7;0.912041!10189-103D9;0.757444!10589-108D4;0.709277!10425-106D2;0.364308!10427-106D4;0.107548!10702-109G9;0.568324!10432-106D9;0.160231!10496-107C1;0.4136!10718-109I7;0.144357!10011-101C2;0.0526164!10053-101G8;0.601925!10686-109F2;0.436562!10084-102B3;0.124749!10012-101C3;0.57516!10085-102B4;0.321596!10482-107A5;0.402445!10419-106C5;0.734205!10080-102A8;0.810081!10760-110E4;0.731659!10709-109H7;0.275243!10710-109H8;0.317837!10703-109H1;0.409125!10719-109I8;0.985263!10642-109A3;0.530246!10177-103C6;0.617206!10164-103B2;0.130286!10173-103C2;0.217335!10166-103B4;0.234436!10083-102B2;0.216204!10188-103D8;0.495624!10552-107I3;0.273453!10553-107I4;0.344729!10013-101C4;0.779336!10536-107G5;0.420662!10618-108G6;0.487779!10423-106C9;0.662041!10785-110H2;0.650337!12238-129G6;0.401353!12239-129G7;0.937403!12240-129G8;0.494168!10416-106C2;0.746495!10801-110I9;0.228981!10766-110F1;0.0122711!10824-111C5;0.14852!10825-111C6;0.280066!10826-111C7;0.336959!10454-106G4;0.365166!10409-106B4;0.454371!10638-108I8;0.520138!10636-108I6;0.583353!10513-107D9;0.990276!10420-106C6;0.109768!10082-102B1;0.939229!10014-101C5;0.560742!10070-101I7;0.963086!10452-106G2;0.418175!10453-106G3;0.73834!10449-106F8;0.627726!10042-101F6;0.577192!10069-101I6;0.470024!10193-103E4;0.691548!10631-108I1;0.338459!10438-106E6;0.51147!10488-107B2;0.820371!10196-103E7;0.507141!10071-101I8;0.541305!10071-101I8;0.495697!10041-101F5;0.144386!10451-106G1;0.412306!10450-106F9;0.85626!10604-108F1;0.712419!10605-108F2;0.625394!10606-108F3;0.645982!10603-108E9;0.794973!10497-107C2;0.71192!10448-106F7;0.910865!10643-109A4;0.944793!10426-106D3;0.590054!10431-106D8;0.760418!10197-103E8;0.56828!10443-106F2;0.894704!10815-111B5;0.488006!10816-111B6;0.25985!10817-111B7;0.269626!10015-101C6;0.202983!10410-106B5;0.64356!10054-101G9;0.704969!10758-110E2;0.555983!10711-109H9;0.27367!10040-101F4;0.389244!10470-106I2;0.29572!10415-106C1;0.385274!10198-103E9;0.476366!10614-108G2;0.891529!10612-108F9;0.303749!10549-107H9;0.447326!10615-108G3;0.777054!10487-107B1;0.93678!10433-106E1;0.627855!10688-109F4;0.392534!10444-106F3;0.253437!10444-106F3;0.664279!10485-107A8;0.713715!10413-106B8;0.636009!10175-103C4;0.43143!10161-103A8;0.266921!12131-128D7;0.332637!10624-108H3;0.632756!10712-109I1;0.510216!10205-103F7;0.779738!10206-103F8;0.668955!10207-103F9;0.894622!10050-101G5;0.852107!10051-101G6;0.167845!10016-101C7;0.345635!10046-101G1;0.367901!10778-110G4;0.859719!10633-108I3;0.0176652!10818-111B8;0.629587!10819-111B9;0.0626792!10820-111C1;0.0597044!10484-107A7;0.0980711!10808-111A7;0.518774!10169-103B7;0.233811!10153-102I9;0.287766!13425-144D5;0.320424!13433-144E4;0.678953!13437-144E8;0.901534!11904-125F5;0.882313!11905-125F6;0.504486!10039-101F3;0.677308!10791-110H8;0.333549!10017-101C8;0.0723471!10045-101F9;0.857275!10509-107D5;0.517189!10839-111E2;0.689617!10692-109F8;0.175706!10079-102A7;0.371813!10078-102A6;0.753005!10721-110A1;0.123772!10569-108B2;0.395787!10570-108B3;0.662674!10571-108B4;0.4913!10647-109A8;0.801135!10752-110D5;0.243348!10782-110G8;0.146583!10726-110A6;0.614463!10018-101C9;0.263654!10086-102B5;0.080787!10182-103D2;0.172801!10165-103B3;0.336826!10499-107C4;0.390535!10408-106B3;0.404041!10019-101D1;0.644569!10068-101I5;0.537392!10075-102A3;0.0434577!10077-102A5;0.947899!10727-110A7;0.238993!10775-110G1;0.403934!10412-106B7;0.533138!12231-129F8;0.694688!12232-129F9;0.299578!12233-129G1;0.4002!12234-129G2;0.394376!10414-106B9;0.197907!10170-103B8;0.588114!10183-103D3;0.235536!10150-102I6;0.284468!10174-103C3;0.289761!10155-103A2;0.240668!10038-101F2;0.298672!10838-111E1;0.420846!10759-110E3;0.999565!10514-107E1;0.862672!10465-106H6;0.985392!10691-109F7;0.886806!10843-111E6;0.102181!10844-111E7;0.689492!11747-123G1;0.541289!11748-123G2;0.684862!11749-123G3;0.297399!11750-123G4;0.245374!11751-123G5;0.580095!11840-124H4;0.817765!11752-123G6;0.834109!11753-123G7;0.757869!11754-123G8;0.389879!11755-123G9;0.224656!11756-123H1;0.306936!11833-124G6;0.180884!11760-123H5;0.47572!11836-124G9;0.137267!11758-123H3;0.17613!11835-124G8;0.217245!11762-123H7;0.205612!11838-124H2;0.164565!11757-123H2;0.223826!11759-123H4;0.119793!11761-123H6;0.290515!11842-124H6;0.273094!11837-124H1;0.199531!10568-108B1;0.147161!13230-141I8;0.699651!13231-141I9;0.542549!10696-109G3;0.623963!10493-107B7;0.0218263!10494-107B8;0.602925!10850-111F4;0.554606!10851-111F5;0.206593!10852-111F6;0.636159!10853-111F7;0.814354!10854-111F8;0.328402!10855-111F9;0.92117!10856-111G1;0.395615!10847-111F1;0.571612!10846-111E9;0.434202!10848-111F2;0.452584!10845-111E8;0.513609!10857-111G2;0.788963!10858-111G3;0.362587!10156-103A3;0.256063!11901-125F2;0.288571!11902-125F3;0.307252!11903-125F4;0.667247!10689-109F5;0.750988!10648-109A9;0.752077!10784-110H1;0.116672!10744-110C6;0.24021!10772-110F7;0.359131!10474-106I6;0.0788489!10600-108E6;0.545003!10684-109E9;0.402312!12226-129F3;0.374709!12227-129F4;0.50937!10508-107D4;0.548277!10539-107G8;0.668554!10607-108F4;0.432606!10555-107I6;0.819455!10774-110F9;0.441027!10637-108I7;0.0699582!10663-109C6;0.80981!10728-110A8;0.843196!10729-110A9;0.872652!10430-106D7;0.486306!10730-110B1;0.686723!10813-111B3;0.27739!10812-111B2;0.232086!10037-101F1;0.467705!10172-103C1;0.281325!10163-103B1;0.151701!10076-102A4;0.28359!10073-102A1;0.427887!10036-101E9;0.185284!10195-103E6;0.424838!10277-104E7;0.307112!10434-106E2;0.34124!10550-107I1;0.371494!10545-107H5;0.613559!10544-107H4;0.464691!10704-109H2;0.633554!10510-107D6;0.171263!10558-107I9;0.756637!10020-101D2;0.573433!10732-110B3;0.42235!10049-101G4;0.273532!10698-109G5;0.150597!10437-106E5;0.518855!10417-106C3;0.359707!10035-101E8;0.601171!10171-103B9;0.342578!10157-103A4;0.250159!10034-101E7;0.271406!10072-101I9;0.355023!10199-103F1;0.109134!10200-103F2;0.0273125!10697-109G4;0.727895!10723-110A3;0.144311!10179-103C8;0.377554!10160-103A7;0.238532!10180-103C9;0.162435!10162-103A9;0.0522074!10021-101D3;0.0433634!10840-111E3;0.788047!10706-109H4;0.810207!10033-101E6;0.33477!10032-101E5;0.344879!10490-107B4;0.448025!10439-106E7;0.492655!10022-101D4;0.565652!10176-103C5;0.49581!10469-106I1;0.170537!10067-101I4;0.754643!10411-106B6;0.577646!10471-106I3;0.98732!10030-101E3;0.986356!10475-106I7;0.637802!10787-110H4;0.831522!10477-106I9;0.975063!10695-109G2;0.597535!11771-123I7;0.224746!11772-123I8;0.723827!11773-123I9;0.952332!10093-102C3;0.623812!10442-106F1;0.373951!10442-106F1;0.962326!10201-103F3;0.874659!10639-108I9;0.815383!11843-124H7;0.957481!11841-124H5;0.779762!10693-109F9;0.454024!10436-106E4;0.715548!10483-107A6;0.32227!10282-104F3;0.362733!10023-101D5;0.350132!10066-101I3;0.283114!10065-101I2;0.538345!10800-110I8;0.991916!10610-108F7;0.883423!10841-111E4;0.953675!10541-107H1;0.946029!10842-111E5;0.610366!10562-108A4;0.925547!10024-101D6;0.489388!10064-101I1;0.94958!10609-108F6;0.804589!10048-101G3;0.987035!10781-110G7;0.392816!10181-103D1;0.791432!10159-103A6;0.31373!10056-101H2;0.226233!10737-110B8;0.549005!10025-101D7;0.402573!10044-101F8;0.678117!10424-106D1;0.924961!10463-106H4;0.78157!10616-108G4;0.575391!10486-107A9;0.569421!10062-101H8;0.997115!10202-103F4;0.489374!10158-103A5;0.23736!10441-106E9;0.367985!10031-101E4;0.590641!10063-101H9;0.455319!10063-101H9;0.158618!11763-123H8;0.337411!11765-123I1;0.846598!11768-123I4;0.899702!10807-111A6;0.965857!10790-110H7;0.68266!10798-110I6;0.853894!10786-110H3;0.287328!10591-108D6;0.65381!10593-108D8;0.400951!10590-108D5;0.278344!10026-101D8;0.904964!10096-102C6;0.82295!10168-103B6;0.818906!10154-103A1;0.278305!10209-103G2;0.248958!10061-101H7;0.358518!10027-101D9;0.992999!10043-101F7;0.395609!10783-110G9;0.158786!10028-101E1;0.499328!10060-101H6;0.618714!10203-103F5;0.601746!10059-101H5;0.391712!10047-101G2;0.588644!10029-101E2;0.30119!10058-101H4;0.84041!10418-106C4;0.819605!10492-107B6;0.918334!10694-109G1;0.66331!10797-110I5;0.132697!10057-101H3;0.11954!10100-102D1;0.973946!10055-101H1;0.189723!10204-103F6;0.341214!10191-103E2;0.316456!10563-108A5;0.698432
|name=motif_GGCNAT
|name=motif_GGCNAT
|tomtom_result=SKN7#MA0381.1;0;0.00300552;1.43063;1;6;GGCAAT;GGCCAT;+!UME6#MA0412.1;5;0.0148008;7.04518;1;6;GGCAAT;TCGGCGGCTAATT;+!YRR1#MA0439.1;2;0.0178923;8.51676;1;6;GGCAAT;GCGGAGATAAG;-
}}
}}

Latest revision as of 13:44, 7 September 2012

Full Name: motif_GGCNAT

Motif matrix
POACGT
010033600
020033600
030336000
04840840840840
053360000
060003360

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SKN7#MA0381.100.003005521.4306316GGCAATGGCCAT+
UME6#MA0412.150.01480087.0451816GGCAATTCGGCGGCTAATT+
YRR1#MA0439.120.01789238.5167616GGCAATGCGGAGATAAG-
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