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MacroAPE 1083:CNhs13439 bl f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;154.93911813124274;43.965889124537625;2.883665521920693;227.419812480788!2;172.00347486733372;202.39499148638302;15.798946120853133;39.01107...")
 
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;0.744216!10788-110H5;0.81845!10792-110H9;0.667093!10765-110E9;0.263308!10829-111D1;0.718239!10830-111D2;0.748866!10831-111D3;0.954573!10832-111D4;0.980885!10833-111D5;0.69817!10764-110E8;0.911175!10770-110F5;0.648837!10399-106A3;0.297642!10400-106A4;0.634159!10405-106A9;0.515632!10834-111D6;0.555073!10835-111D7;0.639119!10836-111D8;0.539076!10837-111D9;0.185748!10699-109G6;0.800368!10802-111A1;0.981799!10796-110I4;0.669848!10010-101C1;0.0157023!10810-111A9;0.300687!10421-106C7;0.951475!10708-109H6;0.884522!12235-129G3;0.671582!12236-129G4;0.483356!12237-129G5;0.806077!10167-103B5;0.391398!10151-102I7;0.571476!10428-106D5;0.633797!10795-110I3;0.319291!10805-111A4;0.803541!10052-101G7;0.498921!10189-103D9;0.579128!10589-108D4;0.2991!10425-106D2;0.0862271!10427-106D4;0.756001!10702-109G9;0.44805!10432-106D9;0.712471!10496-107C1;0.923742!10718-109I7;0.994956!10011-101C2;0.43484!10053-101G8;0.298654!10686-109F2;0.979111!10084-102B3;0.945951!10012-101C3;0.332614!10085-102B4;0.644274!10482-107A5;0.60291!10419-106C5;0.0279615!10080-102A8;0.314361!10760-110E4;0.849986!10709-109H7;0.73374!10710-109H8;0.292938!10703-109H1;0.146779!10719-109I8;0.151896!10642-109A3;0.216725!10177-103C6;0.17901!10164-103B2;0.359814!10173-103C2;0.528284!10166-103B4;0.432175!10083-102B2;0.825742!10188-103D8;0.224558!10552-107I3;0.279468!10553-107I4;0.509339!10013-101C4;0.761934!10536-107G5;0.26922!10618-108G6;0.384036!10423-106C9;0.245213!10785-110H2;0.908266!12238-129G6;0.453937!12239-129G7;0.851966!12240-129G8;0.242105!10416-106C2;0.58682!10801-110I9;0.702893!10766-110F1;0.352038!10824-111C5;0.177883!10825-111C6;0.683898!10826-111C7;0.665504!10454-106G4;0.891231!10409-106B4;0.550484!10638-108I8;0.394256!10636-108I6;0.696613!10513-107D9;0.162342!10420-106C6;0.453438!10082-102B1;0.83907!10014-101C5;0.934767!10070-101I7;0.905089!10452-106G2;0.917364!10453-106G3;0.17866!10449-106F8;0.216075!10042-101F6;0.146072!10069-101I6;0.631246!10193-103E4;0.78149!10631-108I1;0.352771!10438-106E6;0.976146!10488-107B2;0.898777!10196-103E7;0.330404!10071-101I8;0.909081!10071-101I8;0.624332!10041-101F5;0.597891!10451-106G1;0.0975555!10450-106F9;0.0830427!10604-108F1;0.0531119!10605-108F2;0.923901!10606-108F3;0.85919!10603-108E9;0.795057!10497-107C2;0.573838!10448-106F7;0.033255!10643-109A4;0.884726!10426-106D3;0.20478!10431-106D8;0.707071!10197-103E8;0.854996!10443-106F2;0.867688!10815-111B5;0.179657!10816-111B6;0.526111!10817-111B7;0.394044!10015-101C6;0.300815!10410-106B5;0.0393533!10054-101G9;0.400401!10758-110E2;0.85277!10711-109H9;0.234576!10040-101F4;0.486751!10470-106I2;0.479544!10415-106C1;0.813936!10198-103E9;0.420976!10614-108G2;0.945068!10612-108F9;0.247213!10549-107H9;0.486028!10615-108G3;0.989235!10487-107B1;0.0346502!10433-106E1;0.542535!10688-109F4;0.375071!10444-106F3;0.507691!10444-106F3;0.561848!10485-107A8;0.726125!10413-106B8;0.235446!10175-103C4;0.297583!10161-103A8;0.528574!12131-128D7;0.812561!10624-108H3;0.570911!10712-109I1;0.124536!10205-103F7;0.0945486!10206-103F8;0.430559!10207-103F9;0.59433!10050-101G5;0.119549!10051-101G6;0.712075!10016-101C7;0.598763!10046-101G1;0.886975!10778-110G4;0.70012!10633-108I3;0.849968!10818-111B8;0.190864!10819-111B9;0.281373!10820-111C1;0.35866!10484-107A7;0.284888!10808-111A7;0.311843!10169-103B7;0.136074!10153-102I9;0.515243!13425-144D5;0.632804!13433-144E4;0.312408!13437-144E8;0.477252!11904-125F5;0.909028!11905-125F6;0.839536!10039-101F3;0.566696!10791-110H8;0.565014!10017-101C8;0.751268!10045-101F9;0.950356!10509-107D5;0.882561!10839-111E2;0.182773!10692-109F8;0.624645!10079-102A7;0.398625!10078-102A6;0.883827!10721-110A1;0.831646!10569-108B2;0.765962!10570-108B3;0.434416!10571-108B4;0.395238!10647-109A8;0.612638!10752-110D5;0.344263!10782-110G8;0.199895!10726-110A6;0.443855!10018-101C9;0.936596!10086-102B5;0.668151!10182-103D2;0.335688!10165-103B3;0.95379!10499-107C4;0.738912!10408-106B3;0.536221!10019-101D1;0.8073!10068-101I5;0.39619!10075-102A3;0.63365!10077-102A5;0.858376!10727-110A7;0.157782!10775-110G1;0.552539!10412-106B7;0.667725!12231-129F8;0.726526!12232-129F9;0.202481!12233-129G1;0.742029!12234-129G2;0.844461!10414-106B9;0.254802!10170-103B8;0.770188!10183-103D3;0.649367!10150-102I6;0.741168!10174-103C3;0.845515!10155-103A2;0.712025!10038-101F2;0.980806!10838-111E1;0.914953!10759-110E3;0.398512!10514-107E1;0.59606!10465-106H6;0.581159!10691-109F7;0.814081!10843-111E6;0.89911!10844-111E7;0.28908!11747-123G1;0.249966!11748-123G2;0.244104!11749-123G3;0.498971!11750-123G4;0.868565!11751-123G5;0.554758!11840-124H4;0.84078!11752-123G6;0.269937!11753-123G7;0.902992!11754-123G8;0.55862!11755-123G9;0.145288!11756-123H1;0.212572!11833-124G6;0.0862012!11760-123H5;0.327329!11836-124G9;0.174603!11758-123H3;0.7665!11835-124G8;0.848541!11762-123H7;0.579047!11838-124H2;0.970427!11757-123H2;0.501694!11759-123H4;0.5638!11761-123H6;0.0492939!11842-124H6;0.353079!11837-124H1;0.838278!10568-108B1;0.571012!13230-141I8;0.656!13231-141I9;0.996635!10696-109G3;0.664073!10493-107B7;0.288867!10494-107B8;0.0987423!10850-111F4;0.140787!10851-111F5;0.653573!10852-111F6;0.55723!10853-111F7;0.887531!10854-111F8;0.451075!10855-111F9;0.947379!10856-111G1;0.34241!10847-111F1;0.604816!10846-111E9;0.175022!10848-111F2;0.877188!10845-111E8;0.384914!10857-111G2;0.309261!10858-111G3;0.185118!10156-103A3;0.621635!11901-125F2;0.897519!11902-125F3;0.657255!11903-125F4;0.890403!10689-109F5;0.905048!10648-109A9;0.416509!10784-110H1;0.832317!10744-110C6;0.631333!10772-110F7;0.78083!10474-106I6;0.236186!10600-108E6;0.429558!10684-109E9;0.665796!12226-129F3;0.747734!12227-129F4;0.848559!10508-107D4;0.242135!10539-107G8;0.285779!10607-108F4;0.916533!10555-107I6;0.341441!10774-110F9;0.892641!10637-108I7;0.478097!10663-109C6;0.793634!10728-110A8;0.739344!10729-110A9;0.476539!10430-106D7;0.815372!10730-110B1;0.562425!10813-111B3;0.752617!10812-111B2;0.750704!10037-101F1;0.66369!10172-103C1;0.480451!10163-103B1;0.677494!10076-102A4;0.979008!10073-102A1;0.31468!10036-101E9;0.370148!10195-103E6;0.567351!10277-104E7;0.489028!10434-106E2;0.318867!10550-107I1;0.517394!10545-107H5;0.424537!10544-107H4;0.488003!10704-109H2;0.843194!10510-107D6;0.7884!10558-107I9;0.524436!10020-101D2;0.646402!10732-110B3;0.617306!10049-101G4;0.747831!10698-109G5;0.238289!10437-106E5;0.27489!10417-106C3;0.920353!10035-101E8;0.981911!10171-103B9;0.555554!10157-103A4;0.580355!10034-101E7;0.748307!10072-101I9;0.559102!10199-103F1;0.546203!10200-103F2;0.181173!10697-109G4;0.219502!10723-110A3;0.58435!10179-103C8;0.948531!10160-103A7;0.823251!10180-103C9;0.964537!10162-103A9;0.724221!10021-101D3;0.920875!10840-111E3;0.135562!10706-109H4;0.283703!10033-101E6;0.753149!10032-101E5;0.911909!10490-107B4;0.570831!10439-106E7;0.0896645!10022-101D4;0.442112!10176-103C5;0.568221!10469-106I1;0.597372!10067-101I4;0.0747781!10411-106B6;0.465341!10471-106I3;0.00180341!10030-101E3;0.467045!10475-106I7;0.894654!10787-110H4;0.459056!10477-106I9;0.124934!10695-109G2;0.684232!11771-123I7;0.90363!11772-123I8;0.12411!11773-123I9;0.0264211!10093-102C3;0.103104!10442-106F1;0.147018!10442-106F1;0.752956!10201-103F3;0.819772!10639-108I9;0.773611!11843-124H7;0.603545!11841-124H5;0.0341949!10693-109F9;0.327912!10436-106E4;0.144929!10483-107A6;0.665908!10282-104F3;0.0244731!10023-101D5;0.371146!10066-101I3;0.376993!10065-101I2;0.672297!10800-110I8;0.961347!10610-108F7;0.392742!10841-111E4;0.301253!10541-107H1;0.122959!10842-111E5;0.707557!10562-108A4;0.521467!10024-101D6;0.0258999!10064-101I1;0.78438!10609-108F6;0.176194!10048-101G3;0.204624!10781-110G7;0.811111!10181-103D1;0.239397!10159-103A6;0.742414!10056-101H2;0.90092!10737-110B8;0.628911!10025-101D7;0.784642!10044-101F8;0.0817567!10424-106D1;0.403485!10463-106H4;0.629385!10616-108G4;0.834742!10486-107A9;0.775438!10062-101H8;0.885378!10202-103F4;0.207528!10158-103A5;0.109387!10441-106E9;0.75914!10031-101E4;0.368934!10063-101H9;0.425432!10063-101H9;0.614325!11763-123H8;0.773277!11765-123I1;0.971326!11768-123I4;0.320253!10807-111A6;0.578822!10790-110H7;0.987525!10798-110I6;0.314141!10786-110H3;0.375249!10591-108D6;0.578657!10593-108D8;0.916524!10590-108D5;0.827359!10026-101D8;0.623903!10096-102C6;0.482403!10168-103B6;0.137711!10154-103A1;0.595103!10209-103G2;0.635489!10061-101H7;0.129971!10027-101D9;0.701515!10043-101F7;0.316302!10783-110G9;0.136527!10028-101E1;0.25927!10060-101H6;0.69743!10203-103F5;0.996127!10059-101H5;0.0986599!10047-101G2;0.470688!10029-101E2;0.00168521!10058-101H4;0.113579!10418-106C4;0.516317!10492-107B6;0.860877!10694-109G1;0.436269!10797-110I5;0.652443!10057-101H3;0.102666!10100-102D1;0.86341!10055-101H1;0.364276!10204-103F6;0.738675!10191-103E2;0.709229!10563-108A5;0.11207
|name=CNhs13439_bl_f1
|name=CNhs13439_bl_f1
|tomtom_result=che-1#MA0260.1;-6;0.000582007;0.277035;0.55407;6;TCTCAAGAAACC;GAAACC;+!RME1#MA0370.1;0;0.00676804;3.22158;1;10;TCTCAAGAAACC;TCCAAAGGAA;+!AZF1#MA0277.1;-1;0.00729401;3.47195;1;9;TCTCAAGAAACC;AAAAAGAAA;+!ttx-3::ceh-10#MA0263.1;-1;0.0104608;4.97936;1;11;TCTCAAGAAACC;TTAACGAAGCCAAT;-!Klf4#MA0039.1;-2;0.0178359;8.4899;1;10;TCTCAAGAAACC;TAAAGGAAGG;+!GSM1#MA0308.1;-1;0.0184335;8.77433;1;11;TCTCAAGAAACC;ATTAAAAAACTCCGGAGTATA;+!STAT1#MA0137.2;3;0.0207315;9.86817;1;12;TCTCAAGAAACC;CATTTCCCGGAAACC;+
}}
}}

Latest revision as of 13:45, 7 September 2012

Full Name: CNhs13439_bl_f1

Motif matrix
POACGT
1154.9391181312427443.9658891245376252.883665521920693227.419812480788
2172.00347486733372202.3949914863830215.79894612085313339.011072783919516
3111.93360629013054151.9231217424368511.808809672398766153.5429475535229
4176.6153216369187208.9972024953639841.5977638623953751.9981972638113157
5392.474779927073123.34676346419694311.3418204110166662.0451214562017803
6400.467998950025612.0407854220981851.63916912165276915.060531764712284
718.941860731217364.435249389995125402.804219600261263.027155537015001
8282.2341904289318722.62718282552442122.153152603616382.193959400416093
9339.60972161797894.59411869512091533.6086614126022351.39598353278672
10277.5066985409231.8611682284013678122.767332069990927.07328641917381
1145.34639702406284282.169821381708759.9255161339921641.766750718725085
129.884648713589982331.707071754883127.8268011765898659.789963613425606

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
che-1#MA0260.1-60.0005820070.2770350.554076TCTCAAGAAACCGAAACC+
RME1#MA0370.100.006768043.22158110TCTCAAGAAACCTCCAAAGGAA+
AZF1#MA0277.1-10.007294013.4719519TCTCAAGAAACCAAAAAGAAA+
ttx-3::ceh-10#MA0263.1-10.01046084.97936111TCTCAAGAAACCTTAACGAAGCCAAT-
Klf4#MA0039.1-20.01783598.4899110TCTCAAGAAACCTAAAGGAAGG+
GSM1#MA0308.1-10.01843358.77433111TCTCAAGAAACCATTAAAAAACTCCGGAGTATA+
STAT1#MA0137.230.02073159.86817112TCTCAAGAAACCCATTTCCCGGAAACC+
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