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MacroAPE 1083:AATGGGG,motif928: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;1488.725;1.645;74.025;80.605!2;1288.035;1.645;1.645;353.675!3;200.69;1.645;176.015;1266.65!4;62.51;1.645;1526.56;54.285!5;1.645;1.645;1574.2...")
 
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0H6;0.812989!10828-111C9;0.712738!10788-110H5;0.372091!10792-110H9;0.971207!10765-110E9;0.864274!10829-111D1;0.39518!10830-111D2;0.83986!10831-111D3;0.915009!10832-111D4;0.448966!10833-111D5;0.192543!10764-110E8;0.306802!10770-110F5;0.723418!10399-106A3;0.844455!10400-106A4;0.676431!10405-106A9;0.735619!10834-111D6;0.809427!10835-111D7;0.825455!10836-111D8;0.289578!10837-111D9;0.314712!10699-109G6;0.973953!10802-111A1;0.507969!10796-110I4;0.534914!10010-101C1;0.237912!10810-111A9;0.20215!10421-106C7;0.0830792!10708-109H6;0.35206!12235-129G3;0.0194697!12236-129G4;0.426156!12237-129G5;0.317649!10167-103B5;0.312831!10151-102I7;0.646195!10428-106D5;0.745158!10795-110I3;0.0583623!10805-111A4;0.432717!10052-101G7;0.00215073!10189-103D9;0.451656!10589-108D4;0.413936!10425-106D2;0.55798!10427-106D4;0.752388!10702-109G9;0.325193!10432-106D9;0.0439863!10496-107C1;0.242555!10718-109I7;0.520145!10011-101C2;0.4579!10053-101G8;0.230731!10686-109F2;0.934652!10084-102B3;0.785848!10012-101C3;0.87005!10085-102B4;0.7288!10482-107A5;0.498718!10419-106C5;0.110061!10080-102A8;0.0103315!10760-110E4;0.481952!10709-109H7;0.802487!10710-109H8;0.263145!10703-109H1;0.55861!10719-109I8;0.241601!10642-109A3;0.172166!10177-103C6;0.202171!10164-103B2;0.787227!10173-103C2;0.681664!10166-103B4;0.338927!10083-102B2;0.655972!10188-103D8;0.622953!10552-107I3;0.440181!10553-107I4;0.423316!10013-101C4;0.712485!10536-107G5;0.294523!10618-108G6;0.170131!10423-106C9;0.0973654!10785-110H2;0.143928!12238-129G6;0.272109!12239-129G7;0.264088!12240-129G8;0.571685!10416-106C2;0.136844!10801-110I9;0.362577!10766-110F1;0.327156!10824-111C5;0.905867!10825-111C6;0.383454!10826-111C7;0.32887!10454-106G4;0.319907!10409-106B4;0.330534!10638-108I8;0.236233!10636-108I6;0.604705!10513-107D9;0.148147!10420-106C6;0.232869!10082-102B1;0.457926!10014-101C5;0.290682!10070-101I7;0.26326!10452-106G2;0.388962!10453-106G3;0.165684!10449-106F8;0.216213!10042-101F6;0.229448!10069-101I6;0.744952!10193-103E4;0.523425!10631-108I1;0.881944!10438-106E6;0.0910699!10488-107B2;0.964643!10196-103E7;0.0717052!10071-101I8;0.467155!10071-101I8;0.733662!10041-101F5;0.732904!10451-106G1;0.40978!10450-106F9;0.305959!10604-108F1;0.269823!10605-108F2;0.186522!10606-108F3;0.270195!10603-108E9;0.124897!10497-107C2;0.257476!10448-106F7;0.369505!10643-109A4;0.134431!10426-106D3;0.598559!10431-106D8;0.760802!10197-103E8;0.474267!10443-106F2;0.118428!10815-111B5;0.589011!10816-111B6;0.200638!10817-111B7;0.0940046!10015-101C6;0.229235!10410-106B5;0.177697!10054-101G9;0.174707!10758-110E2;0.600083!10711-109H9;0.69685!10040-101F4;0.71643!10470-106I2;0.713448!10415-106C1;0.288537!10198-103E9;0.596837!10614-108G2;0.156548!10612-108F9;0.972298!10549-107H9;0.443423!10615-108G3;0.102457!10487-107B1;0.255557!10433-106E1;0.301831!10688-109F4;0.555411!10444-106F3;0.706719!10444-106F3;0.285194!10485-107A8;0.413358!10413-106B8;0.381692!10175-103C4;0.798222!10161-103A8;0.714839!12131-128D7;0.844986!10624-108H3;0.825824!10712-109I1;0.399104!10205-103F7;0.338221!10206-103F8;0.332122!10207-103F9;0.347899!10050-101G5;0.473049!10051-101G6;0.964373!10016-101C7;0.558162!10046-101G1;0.462716!10778-110G4;0.991169!10633-108I3;0.812118!10818-111B8;0.0451814!10819-111B9;0.0144451!10820-111C1;0.0145915!10484-107A7;0.0112953!10808-111A7;0.480711!10169-103B7;0.273566!10153-102I9;0.674328!13425-144D5;0.68542!13433-144E4;0.0749049!13437-144E8;0.0679043!11904-125F5;0.052453!11905-125F6;0.325529!10039-101F3;0.540913!10791-110H8;0.67712!10017-101C8;0.419139!10045-101F9;0.151274!10509-107D5;0.964369!10839-111E2;0.875249!10692-109F8;0.801081!10079-102A7;0.243242!10078-102A6;0.15642!10721-110A1;0.323052!10569-108B2;0.0844144!10570-108B3;0.249431!10571-108B4;0.00492641!10647-109A8;0.354364!10752-110D5;0.243229!10782-110G8;0.389994!10726-110A6;0.814048!10018-101C9;0.0301931!10086-102B5;0.627993!10182-103D2;0.310442!10165-103B3;0.987102!10499-107C4;0.787391!10408-106B3;0.832415!10019-101D1;0.77151!10068-101I5;0.135328!10075-102A3;0.176369!10077-102A5;0.220702!10727-110A7;0.38375!10775-110G1;0.252187!10412-106B7;0.232052!12231-129F8;0.972457!12232-129F9;0.861386!12233-129G1;0.797843!12234-129G2;0.667172!10414-106B9;0.747406!10170-103B8;0.118591!10183-103D3;0.975211!10150-102I6;0.917707!10174-103C3;0.669714!10155-103A2;0.927067!10038-101F2;0.699518!10838-111E1;0.688298!10759-110E3;0.108746!10514-107E1;0.327848!10465-106H6;0.33567!10691-109F7;0.172768!10843-111E6;0.723054!10844-111E7;0.148294!11747-123G1;0.152881!11748-123G2;0.356662!11749-123G3;0.377193!11750-123G4;0.0241622!11751-123G5;0.223249!11840-124H4;0.0707567!11752-123G6;0.325816!11753-123G7;0.0134748!11754-123G8;0.0593791!11755-123G9;0.149195!11756-123H1;0.0740277!11833-124G6;0.0226823!11760-123H5;0.0919391!11836-124G9;0.0299951!11758-123H3;0.0198426!11835-124G8;0.0555514!11762-123H7;0.38727!11838-124H2;0.0100331!11757-123H2;0.056015!11759-123H4;0.0137497!11761-123H6;0.110856!11842-124H6;0.0150382!11837-124H1;0.256515!10568-108B1;0.159596!13230-141I8;0.768882!13231-141I9;0.920396!10696-109G3;0.743132!10493-107B7;0.911059!10494-107B8;0.632166!10850-111F4;0.195275!10851-111F5;0.285665!10852-111F6;0.216971!10853-111F7;0.958177!10854-111F8;0.150881!10855-111F9;0.548959!10856-111G1;0.769826!10847-111F1;0.346561!10846-111E9;0.436033!10848-111F2;0.465372!10845-111E8;0.965678!10857-111G2;0.71404!10858-111G3;0.472411!10156-103A3;0.314111!11901-125F2;0.725228!11902-125F3;0.448876!11903-125F4;0.522227!10689-109F5;0.304383!10648-109A9;0.257748!10784-110H1;0.895642!10744-110C6;0.0619023!10772-110F7;0.718967!10474-106I6;0.955588!10600-108E6;0.723136!10684-109E9;0.0344715!12226-129F3;0.381478!12227-129F4;0.98258!10508-107D4;0.0733368!10539-107G8;0.355308!10607-108F4;0.228209!10555-107I6;0.133433!10774-110F9;0.173368!10637-108I7;0.270677!10663-109C6;0.182984!10728-110A8;0.168139!10729-110A9;0.220622!10430-106D7;0.646132!10730-110B1;0.00317279!10813-111B3;0.700203!10812-111B2;0.859371!10037-101F1;0.377778!10172-103C1;0.724186!10163-103B1;0.713231!10076-102A4;0.806524!10073-102A1;0.882899!10036-101E9;0.666217!10195-103E6;0.907196!10277-104E7;0.709378!10434-106E2;0.378134!10550-107I1;0.810504!10545-107H5;0.286696!10544-107H4;0.593485!10704-109H2;0.80641!10510-107D6;0.832517!10558-107I9;0.175996!10020-101D2;0.03096!10732-110B3;0.588775!10049-101G4;0.537733!10698-109G5;0.717961!10437-106E5;0.186262!10417-106C3;0.392655!10035-101E8;0.29296!10171-103B9;0.788198!10157-103A4;0.953198!10034-101E7;0.683921!10072-101I9;0.738761!10199-103F1;0.571354!10200-103F2;0.560944!10697-109G4;0.121944!10723-110A3;0.358601!10179-103C8;0.698618!10160-103A7;0.846763!10180-103C9;0.858439!10162-103A9;0.540496!10021-101D3;0.661651!10840-111E3;0.358232!10706-109H4;0.645086!10033-101E6;0.400777!10032-101E5;0.713855!10490-107B4;0.883441!10439-106E7;0.337216!10022-101D4;0.170989!10176-103C5;0.23479!10469-106I1;0.920987!10067-101I4;0.286101!10411-106B6;0.695924!10471-106I3;0.323537!10030-101E3;0.945155!10475-106I7;0.70932!10787-110H4;0.165844!10477-106I9;0.050868!10695-109G2;0.0868558!11771-123I7;0.957438!11772-123I8;0.41579!11773-123I9;0.752251!10093-102C3;0.672116!10442-106F1;0.169078!10442-106F1;0.375643!10201-103F3;0.395336!10639-108I9;0.387749!11843-124H7;0.941041!11841-124H5;0.921894!10693-109F9;0.497878!10436-106E4;0.181437!10483-107A6;0.242993!10282-104F3;0.61876!10023-101D5;0.480781!10066-101I3;0.437478!10065-101I2;0.875804!10800-110I8;0.365983!10610-108F7;0.0319756!10841-111E4;0.279748!10541-107H1;0.0878571!10842-111E5;0.0227519!10562-108A4;0.438653!10024-101D6;0.572417!10064-101I1;0.140332!10609-108F6;0.468812!10048-101G3;0.117128!10781-110G7;0.420586!10181-103D1;0.21143!10159-103A6;0.98167!10056-101H2;0.821422!10737-110B8;0.804358!10025-101D7;0.947367!10044-101F8;0.97619!10424-106D1;0.80111!10463-106H4;0.545284!10616-108G4;0.67873!10486-107A9;0.641307!10062-101H8;0.260059!10202-103F4;0.859103!10158-103A5;0.388113!10441-106E9;0.731033!10031-101E4;0.0664867!10063-101H9;0.805922!10063-101H9;0.566808!11763-123H8;0.303941!11765-123I1;0.832356!11768-123I4;0.497249!10807-111A6;0.65462!10790-110H7;0.0490066!10798-110I6;0.214652!10786-110H3;0.338117!10591-108D6;0.168158!10593-108D8;0.307224!10590-108D5;0.308926!10026-101D8;0.117576!10096-102C6;0.49528!10168-103B6;0.015895!10154-103A1;0.585331!10209-103G2;0.948175!10061-101H7;0.0969194!10027-101D9;0.36484!10043-101F7;0.626069!10783-110G9;0.807856!10028-101E1;0.947669!10060-101H6;0.205895!10203-103F5;0.366256!10059-101H5;0.0345739!10047-101G2;0.218662!10029-101E2;0.26742!10058-101H4;0.108896!10418-106C4;0.401606!10492-107B6;0.370593!10694-109G1;0.381866!10797-110I5;0.374179!10057-101H3;0.459828!10100-102D1;0.9867!10055-101H1;0.207274!10204-103F6;0.527914!10191-103E2;0.403517!10563-108A5;0.293721
|name=AATGGGG,motif928,CNhs11973,T:1645.0(49.52%),B:29608.4(40.14%),P:1e-27
|name=AATGGGG,motif928,CNhs11973,T:1645.0(49.52%),B:29608.4(40.14%),P:1e-27
|tomtom_result=MZF1_1-4#MA0056.1;-2;0.00355607;1.69269;1;5;AATGGGG;TGGGGA;+!PLAG1#MA0163.1;7;0.00406921;1.93694;1;7;AATGGGG;GGGGCCCAAGGGGG;+!YER130C#MA0423.1;1;0.00502272;2.39082;1;7;AATGGGG;AATAGGGGT;-!AG#MA0005.1;3;0.00731461;3.48175;1;7;AATGGGG;CCAAATTTGGT;+!ADR1#MA0268.1;-1;0.00737099;3.50859;1;6;AATGGGG;GTGGGGT;-!MCM1#MA0331.1;5;0.00909011;4.32689;1;7;AATGGGG;TTCCTAATTGGG;-!YPR022C#MA0436.1;0;0.00988392;4.70475;1;7;AATGGGG;CGTGGGG;-!MZF1_5-13#MA0057.1;1;0.0114909;5.46966;1;7;AATGGGG;GGAGGGGGAA;+!ROX1#MA0371.1;6;0.0129515;6.1649;1;6;AATGGGG;GAGAACAATGGA;-!MSN2#MA0341.1;-2;0.0132991;6.33037;1;5;AATGGGG;AGGGG;+!MSN4#MA0342.1;-2;0.0145924;6.94599;1;5;AATGGGG;AGGGG;+!RGM1#MA0366.1;-2;0.0160523;7.64091;1;5;AATGGGG;AGGGG;+!GIS1#MA0306.1;1;0.0207532;9.87852;1;7;AATGGGG;TTTAGGGGT;-
}}
}}

Latest revision as of 13:48, 7 September 2012

Full Name: AATGGGG,motif928,CNhs11973,T:1645.0(49.52%),B:29608.4(40.14%),P:1e-27

Motif matrix
POACGT
11488.7251.64574.02580.605
21288.0351.6451.645353.675
3200.691.645176.0151266.65
462.511.6451526.5654.285
51.6451.6451574.26567.445
6103.635111.861427.861.645
7294.4551.6451347.2551.645

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
MZF1_1-4#MA0056.1-20.003556071.6926915AATGGGGTGGGGA+
PLAG1#MA0163.170.004069211.9369417AATGGGGGGGGCCCAAGGGGG+
YER130C#MA0423.110.005022722.3908217AATGGGGAATAGGGGT-
AG#MA0005.130.007314613.4817517AATGGGGCCAAATTTGGT+
ADR1#MA0268.1-10.007370993.5085916AATGGGGGTGGGGT-
MCM1#MA0331.150.009090114.3268917AATGGGGTTCCTAATTGGG-
YPR022C#MA0436.100.009883924.7047517AATGGGGCGTGGGG-
MZF1_5-13#MA0057.110.01149095.4696617AATGGGGGGAGGGGGAA+
ROX1#MA0371.160.01295156.164916AATGGGGGAGAACAATGGA-
MSN2#MA0341.1-20.01329916.3303715AATGGGGAGGGG+
MSN4#MA0342.1-20.01459246.9459915AATGGGGAGGGG+
RGM1#MA0366.1-20.01605237.6409115AATGGGGAGGGG+
GIS1#MA0306.110.02075329.8785217AATGGGGTTTAGGGGT-
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