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MacroAPE 1083:TCTTCAA,motif816: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;1.488;108.624;116.064;1261.824!2;1.488;1483.536;1.488;1.488!3;252.96;1.488;1.488;1232.064!4;61.008;1.488;1.488;1424.016!5;313.968;1077.312;1...")
 
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10789-110H6;0.651196!10828-111C9;0.982168!10788-110H5;0.906879!10792-110H9;0.914099!10765-110E9;0.425743!10829-111D1;0.911208!10830-111D2;0.745948!10831-111D3;0.695734!10832-111D4;0.82565!10833-111D5;0.906859!10764-110E8;0.550758!10770-110F5;0.777576!10399-106A3;0.885255!10400-106A4;0.710922!10405-106A9;0.609768!10834-111D6;0.984123!10835-111D7;0.969959!10836-111D8;0.903024!10837-111D9;0.162007!10699-109G6;0.721442!10802-111A1;0.901663!10796-110I4;0.220839!10010-101C1;0.180442!10810-111A9;0.705102!10421-106C7;0.0376717!10708-109H6;0.386919!12235-129G3;0.897563!12236-129G4;0.890231!12237-129G5;0.136047!10167-103B5;0.841725!10151-102I7;0.638018!10428-106D5;0.917982!10795-110I3;0.377005!10805-111A4;0.88714!10052-101G7;0.210409!10189-103D9;0.718898!10589-108D4;0.807206!10425-106D2;0.0808949!10427-106D4;0.915951!10702-109G9;0.634568!10432-106D9;0.347195!10496-107C1;0.780284!10718-109I7;0.151981!10011-101C2;0.911621!10053-101G8;0.711559!10686-109F2;0.0773096!10084-102B3;0.891531!10012-101C3;0.732664!10085-102B4;0.639636!10482-107A5;0.850472!10419-106C5;0.0707452!10080-102A8;0.0594447!10760-110E4;0.946753!10709-109H7;0.901522!10710-109H8;0.212924!10703-109H1;0.185939!10719-109I8;0.573194!10642-109A3;0.550264!10177-103C6;0.546095!10164-103B2;0.835576!10173-103C2;0.540791!10166-103B4;0.605118!10083-102B2;0.440582!10188-103D8;0.780637!10552-107I3;0.66906!10553-107I4;0.437876!10013-101C4;0.887044!10536-107G5;0.986247!10618-108G6;0.924632!10423-106C9;0.104086!10785-110H2;0.246381!12238-129G6;0.0842145!12239-129G7;0.414201!12240-129G8;0.937278!10416-106C2;0.29191!10801-110I9;0.708421!10766-110F1;0.663399!10824-111C5;0.325859!10825-111C6;0.804911!10826-111C7;0.958777!10454-106G4;0.90762!10409-106B4;0.571123!10638-108I8;0.48857!10636-108I6;0.127612!10513-107D9;0.139824!10420-106C6;0.29998!10082-102B1;0.732786!10014-101C5;0.851132!10070-101I7;0.692702!10452-106G2;0.989709!10453-106G3;0.880818!10449-106F8;0.859546!10042-101F6;0.928949!10069-101I6;0.927676!10193-103E4;0.704822!10631-108I1;0.944261!10438-106E6;0.994959!10488-107B2;0.034303!10196-103E7;0.733062!10071-101I8;0.830347!10071-101I8;0.80927!10041-101F5;0.924668!10451-106G1;0.98007!10450-106F9;0.580664!10604-108F1;0.347565!10605-108F2;0.0120635!10606-108F3;0.0825921!10603-108E9;0.0306884!10497-107C2;0.00443257!10448-106F7;0.0686626!10643-109A4;0.562936!10426-106D3;0.148797!10431-106D8;0.155211!10197-103E8;0.792205!10443-106F2;0.970265!10815-111B5;0.199116!10816-111B6;0.745415!10817-111B7;0.782686!10015-101C6;0.840675!10410-106B5;0.902523!10054-101G9;0.788711!10758-110E2;0.873757!10711-109H9;0.770736!10040-101F4;0.830926!10470-106I2;0.968967!10415-106C1;0.032553!10198-103E9;0.297802!10614-108G2;0.519522!10612-108F9;0.889222!10549-107H9;0.235102!10615-108G3;0.236107!10487-107B1;0.129014!10433-106E1;0.482611!10688-109F4;0.149696!10444-106F3;0.329378!10444-106F3;0.606971!10485-107A8;0.830909!10413-106B8;0.340017!10175-103C4;0.660067!10161-103A8;0.351436!12131-128D7;0.55609!10624-108H3;0.207839!10712-109I1;0.551922!10205-103F7;0.762084!10206-103F8;0.253338!10207-103F9;0.216216!10050-101G5;0.605743!10051-101G6;0.857655!10016-101C7;0.505896!10046-101G1;0.210296!10778-110G4;0.189942!10633-108I3;0.785386!10818-111B8;0.164259!10819-111B9;0.038369!10820-111C1;0.0556174!10484-107A7;0.0563518!10808-111A7;0.301276!10169-103B7;0.296256!10153-102I9;0.611257!13425-144D5;0.982184!13433-144E4;0.942906!13437-144E8;0.907644!11904-125F5;0.878761!11905-125F6;0.612571!10039-101F3;0.940798!10791-110H8;0.868013!10017-101C8;0.284805!10045-101F9;0.688424!10509-107D5;0.902963!10839-111E2;0.361046!10692-109F8;0.184058!10079-102A7;0.417535!10078-102A6;0.585692!10721-110A1;0.392752!10569-108B2;0.31735!10570-108B3;0.421223!10571-108B4;0.404328!10647-109A8;0.185384!10752-110D5;0.325362!10782-110G8;0.677792!10726-110A6;0.185652!10018-101C9;0.617893!10086-102B5;0.134337!10182-103D2;0.102714!10165-103B3;0.972216!10499-107C4;0.91283!10408-106B3;0.0298977!10019-101D1;0.27171!10068-101I5;0.513227!10075-102A3;0.340339!10077-102A5;0.903894!10727-110A7;0.79973!10775-110G1;0.644308!10412-106B7;0.575752!12231-129F8;0.989054!12232-129F9;0.350041!12233-129G1;0.497778!12234-129G2;0.432915!10414-106B9;0.656365!10170-103B8;0.00561917!10183-103D3;0.601587!10150-102I6;0.748216!10174-103C3;0.96014!10155-103A2;0.843872!10038-101F2;0.885947!10838-111E1;0.918481!10759-110E3;0.678394!10514-107E1;0.276983!10465-106H6;0.789036!10691-109F7;0.867619!10843-111E6;0.194771!10844-111E7;0.511703!11747-123G1;0.661898!11748-123G2;0.238601!11749-123G3;0.540601!11750-123G4;0.261289!11751-123G5;0.195792!11840-124H4;0.240974!11752-123G6;0.472146!11753-123G7;0.98784!11754-123G8;0.43135!11755-123G9;0.705978!11756-123H1;0.357961!11833-124G6;0.416805!11760-123H5;0.0653998!11836-124G9;0.0498363!11758-123H3;0.865744!11835-124G8;0.440808!11762-123H7;0.163902!11838-124H2;0.0188503!11757-123H2;0.0488663!11759-123H4;0.0619581!11761-123H6;0.231423!11842-124H6;0.0404012!11837-124H1;0.266214!10568-108B1;0.169927!13230-141I8;0.266659!13231-141I9;0.288907!10696-109G3;0.272464!10493-107B7;0.467294!10494-107B8;0.0359459!10850-111F4;0.0183856!10851-111F5;0.535143!10852-111F6;0.986196!10853-111F7;0.244321!10854-111F8;0.690991!10855-111F9;0.525815!10856-111G1;0.824854!10847-111F1;0.281527!10846-111E9;0.729592!10848-111F2;0.730284!10845-111E8;0.158555!10857-111G2;0.13598!10858-111G3;0.625143!10156-103A3;0.569365!11901-125F2;0.921027!11902-125F3;0.38455!11903-125F4;0.205041!10689-109F5;0.134825!10648-109A9;0.129665!10784-110H1;0.806916!10744-110C6;0.639045!10772-110F7;0.402276!10474-106I6;0.209894!10600-108E6;0.716639!10684-109E9;0.343009!12226-129F3;0.176838!12227-129F4;0.488079!10508-107D4;0.930532!10539-107G8;0.0781287!10607-108F4;0.151198!10555-107I6;0.784062!10774-110F9;0.0893971!10637-108I7;0.534035!10663-109C6;0.620139!10728-110A8;0.760145!10729-110A9;0.665984!10430-106D7;0.999587!10730-110B1;0.247789!10813-111B3;0.460764!10812-111B2;0.861099!10037-101F1;0.670351!10172-103C1;0.985868!10163-103B1;0.396193!10076-102A4;0.95697!10073-102A1;0.72279!10036-101E9;0.731141!10195-103E6;0.715743!10277-104E7;0.797149!10434-106E2;0.549129!10550-107I1;0.514207!10545-107H5;0.00392785!10544-107H4;0.807103!10704-109H2;0.191411!10510-107D6;0.123556!10558-107I9;0.883395!10020-101D2;0.366335!10732-110B3;0.840698!10049-101G4;0.156754!10698-109G5;0.584904!10437-106E5;0.27627!10417-106C3;0.944796!10035-101E8;0.489167!10171-103B9;0.747722!10157-103A4;0.873539!10034-101E7;0.813073!10072-101I9;0.818453!10199-103F1;0.90173!10200-103F2;0.57716!10697-109G4;0.885974!10723-110A3;0.303976!10179-103C8;0.22324!10160-103A7;0.327953!10180-103C9;0.168877!10162-103A9;0.237353!10021-101D3;0.0269165!10840-111E3;0.713582!10706-109H4;0.657072!10033-101E6;0.220088!10032-101E5;0.926208!10490-107B4;0.60449!10439-106E7;0.18726!10022-101D4;0.0802431!10176-103C5;0.449348!10469-106I1;0.73012!10067-101I4;0.388757!10411-106B6;0.462652!10471-106I3;0.428268!10030-101E3;0.605634!10475-106I7;0.862892!10787-110H4;0.287501!10477-106I9;0.660655!10695-109G2;0.956589!11771-123I7;0.756692!11772-123I8;0.130719!11773-123I9;0.411059!10093-102C3;0.64873!10442-106F1;0.405806!10442-106F1;0.88382!10201-103F3;0.997494!10639-108I9;0.88742!11843-124H7;0.197506!11841-124H5;0.578469!10693-109F9;0.953638!10436-106E4;0.103132!10483-107A6;0.520867!10282-104F3;0.0828854!10023-101D5;0.742583!10066-101I3;0.86162!10065-101I2;0.96651!10800-110I8;0.747909!10610-108F7;0.209752!10841-111E4;0.804224!10541-107H1;0.0891117!10842-111E5;0.48766!10562-108A4;0.0981228!10024-101D6;0.0538201!10064-101I1;0.401028!10609-108F6;0.975625!10048-101G3;0.0844014!10781-110G7;0.968561!10181-103D1;0.00136664!10159-103A6;0.927825!10056-101H2;0.847528!10737-110B8;0.774989!10025-101D7;0.433641!10044-101F8;0.742343!10424-106D1;0.787971!10463-106H4;0.637211!10616-108G4;0.0230573!10486-107A9;0.201992!10062-101H8;0.251004!10202-103F4;0.221482!10158-103A5;0.813508!10441-106E9;0.554145!10031-101E4;0.656579!10063-101H9;0.652782!10063-101H9;0.709852!11763-123H8;0.930313!11765-123I1;0.389744!11768-123I4;0.30952!10807-111A6;0.310538!10790-110H7;0.0991915!10798-110I6;0.158711!10786-110H3;0.530406!10591-108D6;0.880466!10593-108D8;0.642864!10590-108D5;0.977457!10026-101D8;0.694183!10096-102C6;0.744301!10168-103B6;0.631446!10154-103A1;0.715951!10209-103G2;0.566874!10061-101H7;0.989554!10027-101D9;0.520656!10043-101F7;0.117851!10783-110G9;0.0658458!10028-101E1;0.974286!10060-101H6;0.29106!10203-103F5;0.934926!10059-101H5;0.756974!10047-101G2;0.942948!10029-101E2;0.503749!10058-101H4;0.735616!10418-106C4;0.709585!10492-107B6;0.891379!10694-109G1;0.957844!10797-110I5;0.650647!10057-101H3;0.051924!10100-102D1;0.905542!10055-101H1;0.880545!10204-103F6;0.909269!10191-103E2;0.285181!10563-108A5;0.528684
|name=TCTTCAA,motif816,CNhs13369,T:1488.0(42.08%),B:24745.2(33.13%),P:1e-28
|name=TCTTCAA,motif816,CNhs13369,T:1488.0(42.08%),B:24745.2(33.13%),P:1e-28
|tomtom_result=SPT2#MA0387.1;1;0.0125045;5.95216;1;7;TCTTCAA;TTCTTTAATT;-!ct#MA0218.1;-1;0.0169116;8.04991;1;6;TCTTCAA;GTTCAA;-!SFL1#MA0377.1;7;0.0201544;9.59352;1;7;TCTTCAA;TTTTATTTCTTCTATTCTCTA;-
}}
}}

Latest revision as of 13:55, 7 September 2012

Full Name: TCTTCAA,motif816,CNhs13369,T:1488.0(42.08%),B:24745.2(33.13%),P:1e-28

Motif matrix
POACGT
11.488108.624116.0641261.824
21.4881483.5361.4881.488
3252.961.4881.4881232.064
461.0081.4881.4881424.016
5313.9681077.3121.48895.232
61258.848107.136120.5281.488
71246.9441.488177.07262.496

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SPT2#MA0387.110.01250455.9521617TCTTCAATTCTTTAATT-
ct#MA0218.1-10.01691168.0499116TCTTCAAGTTCAA-
SFL1#MA0377.170.02015449.5935217TCTTCAATTTTATTTCTTCTATTCTCTA-
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