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MacroAPE 1083:Motif TNAAGC: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;6608!02;1652;1652;1652;1652!03;6608;0;0;0!04;6608;0;0;0!05;0;0;6608;0!06;0;6608;0;0 |macroape_1083_sample_pvalues=11376-118A8;0.5774...")
 
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4!10828-111C9;0.257387!10788-110H5;0.258837!10792-110H9;0.498245!10765-110E9;0.502563!10829-111D1;0.686874!10830-111D2;0.986968!10831-111D3;0.56857!10832-111D4;0.586952!10833-111D5;0.601023!10764-110E8;0.688585!10770-110F5;0.733425!10399-106A3;0.505956!10400-106A4;0.720124!10405-106A9;0.675273!10834-111D6;0.784821!10835-111D7;0.630198!10836-111D8;0.708977!10837-111D9;0.394849!10699-109G6;0.837452!10802-111A1;0.865214!10796-110I4;0.202534!10010-101C1;0.99234!10810-111A9;0.66172!10421-106C7;0.536605!10708-109H6;0.299053!12235-129G3;0.549832!12236-129G4;0.729602!12237-129G5;0.617975!10167-103B5;0.758012!10151-102I7;0.0846332!10428-106D5;0.133164!10795-110I3;0.754099!10805-111A4;0.330553!10052-101G7;0.882627!10189-103D9;0.628675!10589-108D4;0.640007!10425-106D2;0.708514!10427-106D4;0.325471!10702-109G9;0.415618!10432-106D9;0.514592!10496-107C1;0.553665!10718-109I7;0.229574!10011-101C2;0.683874!10053-101G8;0.586505!10686-109F2;0.351104!10084-102B3;0.680929!10012-101C3;0.0863239!10085-102B4;0.103812!10482-107A5;0.0690534!10419-106C5;0.983924!10080-102A8;0.846591!10760-110E4;0.808829!10709-109H7;0.753292!10710-109H8;0.829315!10703-109H1;0.718322!10719-109I8;0.187411!10642-109A3;0.464313!10177-103C6;0.281485!10164-103B2;0.0825145!10173-103C2;0.109796!10166-103B4;0.221998!10083-102B2;0.377607!10188-103D8;0.253302!10552-107I3;0.0952111!10553-107I4;0.984834!10013-101C4;0.83311!10536-107G5;0.299643!10618-108G6;0.457747!10423-106C9;0.648992!10785-110H2;0.795546!12238-129G6;0.945642!12239-129G7;0.666737!12240-129G8;0.610865!10416-106C2;0.374192!10801-110I9;0.745483!10766-110F1;0.423272!10824-111C5;0.948062!10825-111C6;0.877034!10826-111C7;0.890599!10454-106G4;0.863406!10409-106B4;0.70076!10638-108I8;0.950603!10636-108I6;0.843908!10513-107D9;0.690434!10420-106C6;0.742089!10082-102B1;0.572924!10014-101C5;0.909991!10070-101I7;0.981687!10452-106G2;0.927446!10453-106G3;0.99025!10449-106F8;0.78144!10042-101F6;0.792202!10069-101I6;0.222273!10193-103E4;0.624177!10631-108I1;0.103396!10438-106E6;0.972592!10488-107B2;0.630584!10196-103E7;0.648302!10071-101I8;0.591068!10071-101I8;0.495515!10041-101F5;0.0717708!10451-106G1;0.492556!10450-106F9;0.896894!10604-108F1;0.678155!10605-108F2;0.467014!10606-108F3;0.36476!10603-108E9;0.470858!10497-107C2;0.585494!10448-106F7;0.61262!10643-109A4;0.686662!10426-106D3;0.653284!10431-106D8;0.599872!10197-103E8;0.801833!10443-106F2;0.619988!10815-111B5;0.600093!10816-111B6;0.868861!10817-111B7;0.917507!10015-101C6;0.984935!10410-106B5;0.530954!10054-101G9;0.711121!10758-110E2;0.116524!10711-109H9;0.286882!10040-101F4;0.477694!10470-106I2;0.111472!10415-106C1;0.312048!10198-103E9;0.784319!10614-108G2;0.990406!10612-108F9;0.509217!10549-107H9;0.530228!10615-108G3;0.698469!10487-107B1;0.933714!10433-106E1;0.669078!10688-109F4;0.347821!10444-106F3;0.15145!10444-106F3;0.846041!10485-107A8;0.820026!10413-106B8;0.870277!10175-103C4;0.695268!10161-103A8;0.0947981!12131-128D7;0.200888!10624-108H3;0.0474121!10712-109I1;0.738099!10205-103F7;0.718841!10206-103F8;0.58022!10207-103F9;0.598367!10050-101G5;0.995979!10051-101G6;0.885123!10016-101C7;0.789474!10046-101G1;0.805954!10778-110G4;0.742702!10633-108I3;0.911697!10818-111B8;0.654978!10819-111B9;0.894454!10820-111C1;0.940286!10484-107A7;0.969328!10808-111A7;0.746561!10169-103B7;0.709923!10153-102I9;0.123021!13425-144D5;0.157616!13433-144E4;0.605851!13437-144E8;0.590415!11904-125F5;0.489146!11905-125F6;0.639566!10039-101F3;0.10985!10791-110H8;0.112629!10017-101C8;0.531749!10045-101F9;0.624873!10509-107D5;0.73121!10839-111E2;0.797475!10692-109F8;0.538479!10079-102A7;0.324703!10078-102A6;0.510411!10721-110A1;0.767552!10569-108B2;0.694901!10570-108B3;0.840657!10571-108B4;0.788432!10647-109A8;0.954728!10752-110D5;0.60949!10782-110G8;0.801749!10726-110A6;0.763041!10018-101C9;0.464727!10086-102B5;0.241256!10182-103D2;0.0459247!10165-103B3;0.0934892!10499-107C4;0.189697!10408-106B3;0.913476!10019-101D1;0.868884!10068-101I5;0.858371!10075-102A3;0.909104!10077-102A5;0.815894!10727-110A7;0.317017!10775-110G1;0.178815!10412-106B7;0.822708!12231-129F8;0.555092!12232-129F9;0.575938!12233-129G1;0.430195!12234-129G2;0.583843!10414-106B9;0.587964!10170-103B8;0.972262!10183-103D3;0.0562881!10150-102I6;0.0770866!10174-103C3;0.136009!10155-103A2;0.118606!10038-101F2;0.216112!10838-111E1;0.199396!10759-110E3;0.372206!10514-107E1;0.897856!10465-106H6;0.714117!10691-109F7;0.844482!10843-111E6;0.0314843!10844-111E7;0.337283!11747-123G1;0.272462!11748-123G2;0.933998!11749-123G3;0.925654!11750-123G4;0.821037!11751-123G5;0.473011!11840-124H4;0.497528!11752-123G6;0.299953!11753-123G7;0.683888!11754-123G8;0.787993!11755-123G9;0.465262!11756-123H1;0.358236!11833-124G6;0.690822!11760-123H5;0.530573!11836-124G9;0.953287!11758-123H3;0.389056!11835-124G8;0.952545!11762-123H7;0.396564!11838-124H2;0.469818!11757-123H2;0.968622!11759-123H4;0.671184!11761-123H6;0.646229!11842-124H6;0.544623!11837-124H1;0.574348!10568-108B1;0.766982!13230-141I8;0.701951!13231-141I9;0.764031!10696-109G3;0.707479!10493-107B7;0.336278!10494-107B8;0.273589!10850-111F4;0.725236!10851-111F5;0.493658!10852-111F6;0.97173!10853-111F7;0.817974!10854-111F8;0.971704!10855-111F9;0.845782!10856-111G1;0.680509!10847-111F1;0.727297!10846-111E9;0.622903!10848-111F2;0.968088!10845-111E8;0.457225!10857-111G2;0.828793!10858-111G3;0.907497!10156-103A3;0.691589!11901-125F2;0.129566!11902-125F3;0.6921!11903-125F4;0.568397!10689-109F5;0.475463!10648-109A9;0.966401!10784-110H1;0.750894!10744-110C6;0.130584!10772-110F7;0.285467!10474-106I6;0.480684!10600-108E6;0.41767!10684-109E9;0.906846!12226-129F3;0.695595!12227-129F4;0.759408!10508-107D4;0.982067!10539-107G8;0.117343!10607-108F4;0.0487008!10555-107I6;0.43974!10774-110F9;0.511958!10637-108I7;0.513395!10663-109C6;0.769045!10728-110A8;0.567817!10729-110A9;0.3233!10430-106D7;0.939344!10730-110B1;0.459905!10813-111B3;0.506045!10812-111B2;0.767559!10037-101F1;0.593876!10172-103C1;0.120896!10163-103B1;0.057379!10076-102A4;0.13151!10073-102A1;0.0722901!10036-101E9;0.0416051!10195-103E6;0.115526!10277-104E7;0.103471!10434-106E2;0.321143!10550-107I1;0.340576!10545-107H5;0.928134!10544-107H4;0.645236!10704-109H2;0.50537!10510-107D6;0.592226!10558-107I9;0.728659!10020-101D2;0.445399!10732-110B3;0.566987!10049-101G4;0.870427!10698-109G5;0.865899!10437-106E5;0.551942!10417-106C3;0.810736!10035-101E8;0.288865!10171-103B9;0.115014!10157-103A4;0.0863076!10034-101E7;0.146092!10072-101I9;0.126609!10199-103F1;0.035993!10200-103F2;0.871417!10697-109G4;0.424019!10723-110A3;0.910611!10179-103C8;0.67744!10160-103A7;0.051849!10180-103C9;0.0749184!10162-103A9;0.330795!10021-101D3;0.382682!10840-111E3;0.594786!10706-109H4;0.551883!10033-101E6;0.603455!10032-101E5;0.112638!10490-107B4;0.128123!10439-106E7;0.939201!10022-101D4;0.558583!10176-103C5;0.486439!10469-106I1;0.0813884!10067-101I4;0.771895!10411-106B6;0.192378!10471-106I3;0.959353!10030-101E3;0.182248!10475-106I7;0.172326!10787-110H4;0.256794!10477-106I9;0.188585!10695-109G2;0.0612631!11771-123I7;0.467921!11772-123I8;0.59467!11773-123I9;0.901513!10093-102C3;0.622157!10442-106F1;0.815621!10442-106F1;0.580402!10201-103F3;0.530441!10639-108I9;0.53058!11843-124H7;0.0683054!11841-124H5;0.820768!10693-109F9;0.785144!10436-106E4;0.488194!10483-107A6;0.321888!10282-104F3;0.954464!10023-101D5;0.521483!10066-101I3;0.621151!10065-101I2;0.300169!10800-110I8;0.354178!10610-108F7;0.821069!10841-111E4;0.491633!10541-107H1;0.618472!10842-111E5;0.409017!10562-108A4;0.270014!10024-101D6;0.967824!10064-101I1;0.978622!10609-108F6;0.3959!10048-101G3;0.57696!10781-110G7;0.30232!10181-103D1;0.929174!10159-103A6;0.183655!10056-101H2;0.274339!10737-110B8;0.124681!10025-101D7;0.720153!10044-101F8;0.588397!10424-106D1;0.657302!10463-106H4;0.207681!10616-108G4;0.653588!10486-107A9;0.247101!10062-101H8;0.705321!10202-103F4;0.361052!10158-103A5;0.799067!10441-106E9;0.277098!10031-101E4;0.854227!10063-101H9;0.131551!10063-101H9;0.0352281!11763-123H8;0.447784!11765-123I1;0.550058!11768-123I4;0.111694!10807-111A6;0.361713!10790-110H7;0.403192!10798-110I6;0.420781!10786-110H3;0.534135!10591-108D6;0.80745!10593-108D8;0.425742!10590-108D5;0.448545!10026-101D8;0.5525!10096-102C6;0.475351!10168-103B6;0.441565!10154-103A1;0.114402!10209-103G2;0.173988!10061-101H7;0.489169!10027-101D9;0.439859!10043-101F7;0.221427!10783-110G9;0.403712!10028-101E1;0.887691!10060-101H6;0.722328!10203-103F5;0.501379!10059-101H5;0.543823!10047-101G2;0.584251!10029-101E2;0.929284!10058-101H4;0.758585!10418-106C4;0.432816!10492-107B6;0.739521!10694-109G1;0.954774!10797-110I5;0.944094!10057-101H3;0.370992!10100-102D1;0.574543!10055-101H1;0.444129!10204-103F6;0.159812!10191-103E2;0.666496!10563-108A5;0.830657
|name=motif_TNAAGC
|name=motif_TNAAGC
|tomtom_result=Nr2e3#MA0164.1;-1;0.00665838;3.16939;1;5;TAAAGC;CAAGCTT;+!Pax6#MA0069.1;3;0.0078715;3.74683;1;6;TAAAGC;AACTCATGCGTGAA;-!MNB1A#MA0053.1;-1;0.00884524;4.21034;1;5;TAAAGC;AAAGC;+!PBF#MA0064.1;-1;0.0102221;4.86572;1;5;TAAAGC;AAAGC;+!Dof2#MA0020.1;-1;0.0190193;9.05319;1;5;TAAAGC;AAAGCA;+
}}
}}

Latest revision as of 13:58, 7 September 2012

Full Name: motif_TNAAGC

Motif matrix
POACGT
010006608
021652165216521652
036608000
046608000
050066080
060660800

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Nr2e3#MA0164.1-10.006658383.1693915TAAAGCCAAGCTT+
Pax6#MA0069.130.00787153.7468316TAAAGCAACTCATGCGTGAA-
MNB1A#MA0053.1-10.008845244.2103415TAAAGCAAAGC+
PBF#MA0064.1-10.01022214.8657215TAAAGCAAAGC+
Dof2#MA0020.1-10.01901939.0531915TAAAGCAAAGCA+
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