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MacroAPE 1083:CNhs12546 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;779.8344719354961;1670.2201405684032;80.74590280084502;1755.3932423351118!2;978.8918848317193;507.82695311573696;1326.4076989473574;1473.067...")
 
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.541659!10789-110H6;0.772892!10828-111C9;0.377847!10788-110H5;0.457582!10792-110H9;0.691159!10765-110E9;0.655443!10829-111D1;0.9089!10830-111D2;0.99841!10831-111D3;0.460522!10832-111D4;0.533413!10833-111D5;0.885474!10764-110E8;0.809069!10770-110F5;0.305742!10399-106A3;0.968824!10400-106A4;0.626662!10405-106A9;0.637963!10834-111D6;0.606828!10835-111D7;0.696327!10836-111D8;0.127004!10837-111D9;0.441948!10699-109G6;0.401421!10802-111A1;0.714117!10796-110I4;0.51761!10010-101C1;0.0661334!10810-111A9;0.318609!10421-106C7;0.137064!10708-109H6;0.530428!12235-129G3;0.0506232!12236-129G4;0.541416!12237-129G5;0.968695!10167-103B5;0.759407!10151-102I7;0.00235089!10428-106D5;0.00257457!10795-110I3;0.136451!10805-111A4;0.322226!10052-101G7;0.169234!10189-103D9;0.243045!10589-108D4;0.21546!10425-106D2;0.461244!10427-106D4;0.248642!10702-109G9;0.345282!10432-106D9;0.763986!10496-107C1;0.0128354!10718-109I7;0.299141!10011-101C2;0.725882!10053-101G8;0.15775!10686-109F2;0.184125!10084-102B3;0.0352018!10012-101C3;0.0023083!10085-102B4;0.0029928!10482-107A5;0.00943083!10419-106C5;0.360867!10080-102A8;0.213321!10760-110E4;0.597211!10709-109H7;0.396735!10710-109H8;0.0140952!10703-109H1;0.326171!10719-109I8;0.643302!10642-109A3;0.412079!10177-103C6;0.467122!10164-103B2;0.00621027!10173-103C2;0.00451003!10166-103B4;0.0107907!10083-102B2;0.00889881!10188-103D8;0.0050608!10552-107I3;0.00247874!10553-107I4;0.170112!10013-101C4;0.127268!10536-107G5;0.0524304!10618-108G6;0.182059!10423-106C9;0.0444541!10785-110H2;0.0458233!12238-129G6;0.0440437!12239-129G7;0.998054!12240-129G8;0.965969!10416-106C2;0.475213!10801-110I9;0.917567!10766-110F1;0.319346!10824-111C5;0.403735!10825-111C6;0.156062!10826-111C7;0.131914!10454-106G4;0.138766!10409-106B4;0.284715!10638-108I8;0.262488!10636-108I6;0.00301172!10513-107D9;0.00500598!10420-106C6;0.0241189!10082-102B1;0.11096!10014-101C5;0.419832!10070-101I7;0.506219!10452-106G2;0.203131!10453-106G3;0.170821!10449-106F8;0.395268!10042-101F6;0.402556!10069-101I6;0.0229644!10193-103E4;0.135625!10631-108I1;0.00228618!10438-106E6;0.446391!10488-107B2;0.0585524!10196-103E7;0.01994!10071-101I8;0.23829!10071-101I8;0.111285!10041-101F5;0.0058621!10451-106G1;0.059005!10450-106F9;0.00779624!10604-108F1;0.0805584!10605-108F2;0.0254027!10606-108F3;0.0163218!10603-108E9;0.0154673!10497-107C2;0.0311966!10448-106F7;0.0087023!10643-109A4;0.623569!10426-106D3;0.120026!10431-106D8;0.0263632!10197-103E8;0.0209141!10443-106F2;0.173285!10815-111B5;0.130981!10816-111B6;0.237661!10817-111B7;0.125875!10015-101C6;0.173717!10410-106B5;0.288537!10054-101G9;0.4449!10758-110E2;0.0234895!10711-109H9;0.137017!10040-101F4;0.136793!10470-106I2;0.00198552!10415-106C1;0.107735!10198-103E9;0.0115385!10614-108G2;0.287909!10612-108F9;0.0206639!10549-107H9;0.0993367!10615-108G3;0.122856!10487-107B1;0.648259!10433-106E1;0.197917!10688-109F4;0.0114633!10444-106F3;0.0962949!10444-106F3;0.33838!10485-107A8;0.357727!10413-106B8;0.213246!10175-103C4;0.422929!10161-103A8;0.00834617!12131-128D7;0.0184515!10624-108H3;0.254118!10712-109I1;0.168807!10205-103F7;0.913026!10206-103F8;0.131276!10207-103F9;0.114862!10050-101G5;0.699286!10051-101G6;0.788957!10016-101C7;0.305258!10046-101G1;0.424499!10778-110G4;0.204194!10633-108I3;0.958923!10818-111B8;0.01047!10819-111B9;0.0447154!10820-111C1;0.050922!10484-107A7;0.0479346!10808-111A7;0.00025052!10169-103B7;0.776746!10153-102I9;0.00379009!13425-144D5;0.00445252!13433-144E4;0.187897!13437-144E8;0.193792!11904-125F5;0.349775!11905-125F6;0.204161!10039-101F3;0.109!10791-110H8;0.00268414!10017-101C8;0.317397!10045-101F9;0.828466!10509-107D5;0.800312!10839-111E2;0.0415459!10692-109F8;0.990818!10079-102A7;0.000701413!10078-102A6;0.129184!10721-110A1;0.334397!10569-108B2;0.124505!10570-108B3;0.118247!10571-108B4;0.382203!10647-109A8;0.20338!10752-110D5;0.0205866!10782-110G8;0.101573!10726-110A6;0.492437!10018-101C9;0.0868809!10086-102B5;0.186404!10182-103D2;0.30074!10165-103B3;0.00622421!10499-107C4;0.00474138!10408-106B3;0.0429057!10019-101D1;0.301179!10068-101I5;0.855797!10075-102A3;0.460291!10077-102A5;0.754821!10727-110A7;0.848421!10775-110G1;0.0550293!10412-106B7;0.554975!12231-129F8;0.375766!12232-129F9;0.129452!12233-129G1;0.310232!12234-129G2;0.301797!10414-106B9;0.110279!10170-103B8;0.0861705!10183-103D3;0.00137682!10150-102I6;0.00131062!10174-103C3;0.00223485!10155-103A2;0.017583!10038-101F2;0.00753145!10838-111E1;0.0104822!10759-110E3;0.783428!10514-107E1;0.0463479!10465-106H6;0.0388414!10691-109F7;0.373948!10843-111E6;0.0268685!10844-111E7;0.858398!11747-123G1;0.310699!11748-123G2;0.430005!11749-123G3;0.826426!11750-123G4;0.379995!11751-123G5;0.841586!11840-124H4;0.361557!11752-123G6;0.371119!11753-123G7;0.587199!11754-123G8;0.573715!11755-123G9;0.426122!11756-123H1;0.687423!11833-124G6;0.80311!11760-123H5;0.415637!11836-124G9;0.991413!11758-123H3;0.706859!11835-124G8;0.97884!11762-123H7;0.924603!11838-124H2;0.3879!11757-123H2;0.981349!11759-123H4;0.523332!11761-123H6;0.937187!11842-124H6;0.689326!11837-124H1;0.914492!10568-108B1;0.784184!13230-141I8;0.485045!13231-141I9;0.0434019!10696-109G3;0.0302348!10493-107B7;0.465376!10494-107B8;0.0107896!10850-111F4;0.0013161!10851-111F5;0.00361241!10852-111F6;0.0355882!10853-111F7;0.0489009!10854-111F8;0.0173979!10855-111F9;0.0131907!10856-111G1;0.988291!10847-111F1;0.0270488!10846-111E9;0.0728546!10848-111F2;0.0303103!10845-111E8;0.0394767!10857-111G2;0.0885062!10858-111G3;0.0270218!10156-103A3;0.00674496!11901-125F2;0.00247439!11902-125F3;0.480565!11903-125F4;0.226151!10689-109F5;0.287459!10648-109A9;0.0835523!10784-110H1;0.28019!10744-110C6;0.0181552!10772-110F7;0.505059!10474-106I6;0.271327!10600-108E6;0.84103!10684-109E9;0.194735!12226-129F3;0.677474!12227-129F4;0.115483!10508-107D4;0.587196!10539-107G8;0.154356!10607-108F4;0.0414073!10555-107I6;0.637567!10774-110F9;0.119298!10637-108I7;0.414166!10663-109C6;0.915407!10728-110A8;0.813169!10729-110A9;0.281726!10430-106D7;0.657812!10730-110B1;0.406838!10813-111B3;0.133753!10812-111B2;0.419906!10037-101F1;0.664638!10172-103C1;0.00352504!10163-103B1;0.00196761!10076-102A4;0.00368716!10073-102A1;0.0018676!10036-101E9;0.00568481!10195-103E6;0.00249299!10277-104E7;0.00169047!10434-106E2;0.0667952!10550-107I1;0.0126866!10545-107H5;0.0343399!10544-107H4;0.361639!10704-109H2;0.0169671!10510-107D6;0.663958!10558-107I9;0.0291925!10020-101D2;0.44136!10732-110B3;0.0640885!10049-101G4;0.176977!10698-109G5;0.949414!10437-106E5;0.0569199!10417-106C3;0.00144646!10035-101E8;0.0111034!10171-103B9;0.00233407!10157-103A4;0.00157821!10034-101E7;0.00237296!10072-101I9;0.00228694!10199-103F1;0.00739466!10200-103F2;0.570484!10697-109G4;0.149635!10723-110A3;0.869583!10179-103C8;0.407441!10160-103A7;0.00771617!10180-103C9;0.00377899!10162-103A9;0.0561086!10021-101D3;0.0607271!10840-111E3;0.942992!10706-109H4;0.640669!10033-101E6;0.00777161!10032-101E5;0.00174824!10490-107B4;0.00231107!10439-106E7;0.00792673!10022-101D4;0.0316984!10176-103C5;0.128383!10469-106I1;0.00277739!10067-101I4;0.0335138!10411-106B6;0.00766979!10471-106I3;0.00363982!10030-101E3;0.0738791!10475-106I7;0.0248371!10787-110H4;0.922867!10477-106I9;0.664889!10695-109G2;0.443333!11771-123I7;0.953299!11772-123I8;0.03176!11773-123I9;0.24923!10093-102C3;0.124235!10442-106F1;0.640307!10442-106F1;0.236807!10201-103F3;0.25163!10639-108I9;0.105833!11843-124H7;0.0542367!11841-124H5;0.016725!10693-109F9;0.150178!10436-106E4;0.0232963!10483-107A6;0.0761017!10282-104F3;0.0465388!10023-101D5;0.400105!10066-101I3;0.487804!10065-101I2;0.073886!10800-110I8;0.0768744!10610-108F7;0.365103!10841-111E4;0.848127!10541-107H1;0.520364!10842-111E5;0.0825476!10562-108A4;0.55436!10024-101D6;0.775565!10064-101I1;0.676587!10609-108F6;0.128971!10048-101G3;0.82739!10781-110G7;0.0969821!10181-103D1;0.649317!10159-103A6;0.00834048!10056-101H2;0.0257596!10737-110B8;0.00726832!10025-101D7;0.700569!10044-101F8;0.905225!10424-106D1;0.470208!10463-106H4;0.944189!10616-108G4;0.116594!10486-107A9;0.0100492!10062-101H8;0.121597!10202-103F4;0.519785!10158-103A5;0.290519!10441-106E9;0.0168472!10031-101E4;0.713215!10063-101H9;0.0027899!10063-101H9;0.00498829!11763-123H8;0.016884!11765-123I1;0.158098!11768-123I4;0.569305!10807-111A6;0.258966!10790-110H7;0.327393!10798-110I6;0.536943!10786-110H3;0.268171!10591-108D6;0.090365!10593-108D8;0.207481!10590-108D5;0.0872252!10026-101D8;0.111365!10096-102C6;0.969616!10168-103B6;0.0814115!10154-103A1;0.008691!10209-103G2;0.0110074!10061-101H7;0.353465!10027-101D9;0.131921!10043-101F7;0.772779!10783-110G9;0.898926!10028-101E1;0.0421827!10060-101H6;0.860569!10203-103F5;0.241445!10059-101H5;0.311866!10047-101G2;0.224394!10029-101E2;0.611473!10058-101H4;0.590366!10418-106C4;0.159451!10492-107B6;0.0139417!10694-109G1;0.00626131!10797-110I5;0.966283!10057-101H3;0.0105838!10100-102D1;0.155358!10055-101H1;0.0833595!10204-103F6;0.00453022!10191-103E2;0.407555!10563-108A5;0.104426
|name=CNhs12546_bu_f2
|name=CNhs12546_bu_f2
|tomtom_result=PHD1#MA0355.1;0;0.00335839;1.59859;1;7;TTCTGAA;TGCTGCAGGT;-!REST#MA0138.2;14;0.00553971;2.6369;1;7;TTCTGAA;GGCGCTGTCCATGGTGCTGAA;-!SOK2#MA0385.1;1;0.0103132;4.90908;1;7;TTCTGAA;TGCCTGCAGGT;-
}}
}}

Latest revision as of 13:59, 7 September 2012

Full Name: CNhs12546_bu_f2

Motif matrix
POACGT
1779.83447193549611670.220140568403280.745902800845021755.3932423351118
2978.8918848317193507.826953115736961326.40769894735741473.0672207450384
30.04286.1937576398580.00.0
40.00.00.04286.193757639858
50.00.04286.1937576398580.0
61777.01707799711681605.6603306338723903.51634900886280.0
74286.1937576398580.00.00.0

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
PHD1#MA0355.100.003358391.5985917TTCTGAATGCTGCAGGT-
REST#MA0138.2140.005539712.636917TTCTGAAGGCGCTGTCCATGGTGCTGAA-
SOK2#MA0385.110.01031324.9090817TTCTGAATGCCTGCAGGT-
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