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MacroAPE 1083:CNhs12922 bu f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;80.01073769263868;24.756196213019507;201.26171161139132;144.43071083870726!2;69.21339527071422;15.421339911448868;175.81068614166594;190.013...")
 
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669585!10464-106H5;0.519083!10827-111C8;0.720341!10789-110H6;0.394056!10828-111C9;0.223157!10788-110H5;0.469658!10792-110H9;0.475731!10765-110E9;0.429324!10829-111D1;0.465463!10830-111D2;0.264037!10831-111D3;0.898757!10832-111D4;0.586694!10833-111D5;0.387489!10764-110E8;0.341059!10770-110F5;0.261528!10399-106A3;0.411992!10400-106A4;0.635581!10405-106A9;0.313021!10834-111D6;0.447646!10835-111D7;0.418498!10836-111D8;0.405364!10837-111D9;0.258324!10699-109G6;0.400673!10802-111A1;0.560445!10796-110I4;0.519337!10010-101C1;0.54094!10810-111A9;0.633977!10421-106C7;0.610407!10708-109H6;0.517198!12235-129G3;0.740641!12236-129G4;0.254281!12237-129G5;0.260451!10167-103B5;0.291717!10151-102I7;0.260407!10428-106D5;0.222412!10795-110I3;0.242882!10805-111A4;0.504454!10052-101G7;0.290885!10189-103D9;0.832963!10589-108D4;0.877612!10425-106D2;0.296848!10427-106D4;0.387111!10702-109G9;0.51371!10432-106D9;0.759899!10496-107C1;0.413668!10718-109I7;0.431326!10011-101C2;0.327492!10053-101G8;0.857215!10686-109F2;0.0975029!10084-102B3;0.239436!10012-101C3;0.206677!10085-102B4;0.197077!10482-107A5;0.135036!10419-106C5;0.887628!10080-102A8;0.739665!10760-110E4;0.636564!10709-109H7;0.857749!10710-109H8;0.448258!10703-109H1;0.72256!10719-109I8;0.445775!10642-109A3;0.8775!10177-103C6;0.377618!10164-103B2;0.209075!10173-103C2;0.195121!10166-103B4;0.435383!10083-102B2;0.501532!10188-103D8;0.352222!10552-107I3;0.259636!10553-107I4;0.964357!10013-101C4;0.911368!10536-107G5;0.800334!10618-108G6;0.0773717!10423-106C9;0.467014!10785-110H2;0.92789!12238-129G6;0.455317!12239-129G7;0.760566!12240-129G8;0.990593!10416-106C2;0.527855!10801-110I9;0.611681!10766-110F1;0.0730014!10824-111C5;0.0899807!10825-111C6;0.279264!10826-111C7;0.211265!10454-106G4;0.169686!10409-106B4;0.11804!10638-108I8;0.256508!10636-108I6;0.563877!10513-107D9;0.319994!10420-106C6;0.956697!10082-102B1;0.728365!10014-101C5;0.789325!10070-101I7;0.988625!10452-106G2;0.678844!10453-106G3;0.87706!10449-106F8;0.57597!10042-101F6;0.633427!10069-101I6;0.0981555!10193-103E4;0.635402!10631-108I1;0.15622!10438-106E6;0.420934!10488-107B2;0.468451!10196-103E7;0.600507!10071-101I8;0.93278!10071-101I8;0.248974!10041-101F5;0.255363!10451-106G1;0.699566!10450-106F9;0.892789!10604-108F1;0.929975!10605-108F2;0.711439!10606-108F3;0.57337!10603-108E9;0.588185!10497-107C2;0.775362!10448-106F7;0.65376!10643-109A4;0.910967!10426-106D3;0.725972!10431-106D8;0.979938!10197-103E8;0.980917!10443-106F2;0.733333!10815-111B5;0.710017!10816-111B6;0.902109!10817-111B7;0.993294!10015-101C6;0.874275!10410-106B5;0.847932!10054-101G9;0.598094!10758-110E2;0.288771!10711-109H9;0.54487!10040-101F4;0.625994!10470-106I2;0.2412!10415-106C1;0.630997!10198-103E9;0.616504!10614-108G2;0.45844!10612-108F9;0.984533!10549-107H9;0.581188!10615-108G3;0.481222!10487-107B1;0.321876!10433-106E1;0.259483!10688-109F4;0.771594!10444-106F3;0.525126!10444-106F3;0.799008!10485-107A8;0.916551!10413-106B8;0.638573!10175-103C4;0.896833!10161-103A8;0.145684!12131-128D7;0.116112!10624-108H3;0.170494!10712-109I1;0.455584!10205-103F7;0.608163!10206-103F8;0.850664!10207-103F9;0.858731!10050-101G5;0.668028!10051-101G6;0.68565!10016-101C7;0.633823!10046-101G1;0.406802!10778-110G4;0.749206!10633-108I3;0.913623!10818-111B8;0.369715!10819-111B9;0.495148!10820-111C1;0.590904!10484-107A7;0.486916!10808-111A7;0.970452!10169-103B7;0.975722!10153-102I9;0.29483!13425-144D5;0.212755!13433-144E4;0.563866!13437-144E8;0.965702!11904-125F5;0.949129!11905-125F6;0.131934!10039-101F3;0.223451!10791-110H8;0.24459!10017-101C8;0.531896!10045-101F9;0.77058!10509-107D5;0.156625!10839-111E2;0.554375!10692-109F8;0.548151!10079-102A7;0.757723!10078-102A6;0.840763!10721-110A1;0.26933!10569-108B2;0.860962!10570-108B3;0.962875!10571-108B4;0.882217!10647-109A8;0.867678!10752-110D5;0.744316!10782-110G8;0.562738!10726-110A6;0.114638!10018-101C9;0.558508!10086-102B5;0.530002!10182-103D2;0.248085!10165-103B3;0.0789293!10499-107C4;0.130193!10408-106B3;0.439163!10019-101D1;0.79437!10068-101I5;0.516933!10075-102A3;0.736331!10077-102A5;0.329399!10727-110A7;0.424459!10775-110G1;0.105759!10412-106B7;0.204777!12231-129F8;0.749911!12232-129F9;0.269882!12233-129G1;0.186546!12234-129G2;0.207914!10414-106B9;0.269967!10170-103B8;0.557459!10183-103D3;0.294602!10150-102I6;0.225919!10174-103C3;0.23839!10155-103A2;0.109128!10038-101F2;0.167449!10838-111E1;0.125084!10759-110E3;0.50285!10514-107E1;0.834896!10465-106H6;0.236541!10691-109F7;0.209948!10843-111E6;0.686598!10844-111E7;0.721877!11747-123G1;0.393123!11748-123G2;0.178102!11749-123G3;0.103335!11750-123G4;0.389989!11751-123G5;0.654685!11840-124H4;0.2895!11752-123G6;0.450248!11753-123G7;0.673294!11754-123G8;0.125025!11755-123G9;0.163344!11756-123H1;0.533815!11833-124G6;0.523594!11760-123H5;0.711676!11836-124G9;0.447701!11758-123H3;0.207699!11835-124G8;0.813241!11762-123H7;0.69427!11838-124H2;0.366859!11757-123H2;0.861798!11759-123H4;0.429512!11761-123H6;0.301315!11842-124H6;0.341544!11837-124H1;0.796406!10568-108B1;0.664107!13230-141I8;0.36868!13231-141I9;0.287237!10696-109G3;0.409689!10493-107B7;0.676691!10494-107B8;0.56809!10850-111F4;0.653875!10851-111F5;0.517789!10852-111F6;0.501296!10853-111F7;0.825838!10854-111F8;0.679552!10855-111F9;0.650058!10856-111G1;0.155344!10847-111F1;0.90884!10846-111E9;0.929834!10848-111F2;0.822108!10845-111E8;0.842111!10857-111G2;0.716804!10858-111G3;0.859664!10156-103A3;0.921155!11901-125F2;0.226616!11902-125F3;0.190218!11903-125F4;0.113309!10689-109F5;0.124312!10648-109A9;0.891652!10784-110H1;0.472346!10744-110C6;0.283031!10772-110F7;0.77805!10474-106I6;0.32064!10600-108E6;0.223839!10684-109E9;0.822828!12226-129F3;0.864386!12227-129F4;0.755313!10508-107D4;0.966443!10539-107G8;0.311495!10607-108F4;0.164989!10555-107I6;0.664443!10774-110F9;0.439455!10637-108I7;0.82405!10663-109C6;0.539849!10728-110A8;0.814639!10729-110A9;0.978221!10430-106D7;0.13456!10730-110B1;0.506617!10813-111B3;0.932133!10812-111B2;0.395823!10037-101F1;0.649256!10172-103C1;0.201029!10163-103B1;0.388978!10076-102A4;0.248228!10073-102A1;0.19703!10036-101E9;0.260711!10195-103E6;0.190563!10277-104E7;0.170359!10434-106E2;0.0634259!10550-107I1;0.621703!10545-107H5;0.445075!10544-107H4;0.969915!10704-109H2;0.880672!10510-107D6;0.234196!10558-107I9;0.75556!10020-101D2;0.826086!10732-110B3;0.831655!10049-101G4;0.27156!10698-109G5;0.45639!10437-106E5;0.474949!10417-106C3;0.814707!10035-101E8;0.723737!10171-103B9;0.225036!10157-103A4;0.203048!10034-101E7;0.281951!10072-101I9;0.223298!10199-103F1;0.202679!10200-103F2;0.563922!10697-109G4;0.688513!10723-110A3;0.607559!10179-103C8;0.525416!10160-103A7;0.491934!10180-103C9;0.700726!10162-103A9;0.658405!10021-101D3;0.717168!10840-111E3;0.728789!10706-109H4;0.250243!10033-101E6;0.185663!10032-101E5;0.133396!10490-107B4;0.208724!10439-106E7;0.909536!10022-101D4;0.980105!10176-103C5;0.991911!10469-106I1;0.158947!10067-101I4;0.62582!10411-106B6;0.0808383!10471-106I3;0.152578!10030-101E3;0.0555253!10475-106I7;0.312078!10787-110H4;0.988697!10477-106I9;0.806057!10695-109G2;0.283464!11771-123I7;0.215636!11772-123I8;0.837053!11773-123I9;0.460116!10093-102C3;0.800998!10442-106F1;0.923514!10442-106F1;0.293186!10201-103F3;0.192726!10639-108I9;0.684365!11843-124H7;0.687703!11841-124H5;0.468773!10693-109F9;0.597168!10436-106E4;0.68991!10483-107A6;0.994986!10282-104F3;0.574568!10023-101D5;0.243096!10066-101I3;0.361865!10065-101I2;0.11202!10800-110I8;0.220721!10610-108F7;0.314792!10841-111E4;0.479606!10541-107H1;0.169013!10842-111E5;0.482903!10562-108A4;0.852072!10024-101D6;0.666453!10064-101I1;0.934991!10609-108F6;0.194533!10048-101G3;0.508937!10781-110G7;0.87644!10181-103D1;0.262779!10159-103A6;0.0676895!10056-101H2;0.168014!10737-110B8;0.0425138!10025-101D7;0.524635!10044-101F8;0.0934274!10424-106D1;0.868907!10463-106H4;0.445758!10616-108G4;0.96448!10486-107A9;0.728701!10062-101H8;0.420681!10202-103F4;0.457972!10158-103A5;0.871769!10441-106E9;0.106503!10031-101E4;0.323926!10063-101H9;0.185325!10063-101H9;0.263867!11763-123H8;0.260021!11765-123I1;0.108315!11768-123I4;0.436571!10807-111A6;0.469131!10790-110H7;0.411764!10798-110I6;0.409923!10786-110H3;0.522514!10591-108D6;0.840388!10593-108D8;0.638482!10590-108D5;0.836657!10026-101D8;0.674856!10096-102C6;0.77277!10168-103B6;0.768518!10154-103A1;0.114604!10209-103G2;0.162322!10061-101H7;0.922968!10027-101D9;0.232836!10043-101F7;0.259053!10783-110G9;0.487341!10028-101E1;0.845719!10060-101H6;0.264839!10203-103F5;0.902637!10059-101H5;0.892885!10047-101G2;0.494625!10029-101E2;0.687855!10058-101H4;0.890012!10418-106C4;0.365868!10492-107B6;0.599829!10694-109G1;0.807553!10797-110I5;0.768253!10057-101H3;0.348325!10100-102D1;0.240078!10055-101H1;0.951774!10204-103F6;0.391729!10191-103E2;0.634449!10563-108A5;0.892159
|name=CNhs12922_bu_f1
|name=CNhs12922_bu_f1
|tomtom_result=Dof2#MA0020.1;0;0.000197997;0.0942466;0.188445;6;GTCTTTGGC;TGCTTT;-!MNB1A#MA0053.1;-1;0.00089678;0.426867;0.426759;5;GTCTTTGGC;GCTTT;-!PBF#MA0064.1;-1;0.00194873;0.927593;0.618239;5;GTCTTTGGC;GCTTT;-!HNF4A#MA0114.1;2;0.00286047;1.36158;0.680618;9;GTCTTTGGC;TGACCTTTGGCCT;-!Dof3#MA0021.1;0;0.0037317;1.77629;0.710336;6;GTCTTTGGC;CGCTTT;-!SOX10#MA0442.1;-2;0.00501346;2.38641;0.795268;6;GTCTTTGGC;CTTTGT;+!AZF1#MA0277.1;1;0.00692295;3.29533;0.941283;8;GTCTTTGGC;TTTCTTTTT;-!Pou5f1#MA0142.1;-2;0.00902234;4.29463;0.999747;7;GTCTTTGGC;CTTTGTTATGCAAAT;+
}}
}}

Latest revision as of 14:00, 7 September 2012

Full Name: CNhs12922_bu_f1

Motif matrix
POACGT
180.0107376926386824.756196213019507201.26171161139132144.43071083870726
269.2133952707142215.421339911448868175.81068614166594190.01393503192753
30.4273409490577768449.17733350858340.42734094905777680.4273409490577768
40.00.00.0450.4593563557567
50.00.00.0450.4593563557567
60.52047279793318490.813959288482139586.00636604347594363.1185582258654
714.233586370428858102.60852476299983224.40467325549773109.21257196683027
864.2272995584347782.6721633441981166.8218125137422136.73808093938155
919.62685498377698158.34823923011749157.0234459313908115.46081621047139

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Dof2#MA0020.100.0001979970.09424660.1884456GTCTTTGGCTGCTTT-
MNB1A#MA0053.1-10.000896780.4268670.4267595GTCTTTGGCGCTTT-
PBF#MA0064.1-10.001948730.9275930.6182395GTCTTTGGCGCTTT-
HNF4A#MA0114.120.002860471.361580.6806189GTCTTTGGCTGACCTTTGGCCT-
Dof3#MA0021.100.00373171.776290.7103366GTCTTTGGCCGCTTT-
SOX10#MA0442.1-20.005013462.386410.7952686GTCTTTGGCCTTTGT+
AZF1#MA0277.110.006922953.295330.9412838GTCTTTGGCTTTCTTTTT-
Pou5f1#MA0142.1-20.009022344.294630.9997477GTCTTTGGCCTTTGTTATGCAAAT+
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