MacroAPE 1083:HXD4 f1: Difference between revisions
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| ||
|name=HXD4_f1 | |name=HXD4_f1 | ||
|tomtom_result=unc-4#MA0250.1;0;9.75777e-06;0.0046447;0.00448378;7;TTAATTGA;TTAATTG;+!Hmx#MA0192.1;0;1.64137e-05;0.00781294;0.00448378;7;TTAATTGA;TTAATTG;+!CG34031#MA0444.1;0;2.79489e-05;0.0133037;0.00448378;7;TTAATTGA;TTAATTG;+!Prrx2#MA0075.1;-1;3.05463e-05;0.01454;0.00448378;5;TTAATTGA;TAATT;-!CG11085#MA0171.1;0;3.23857e-05;0.0154156;0.00448378;7;TTAATTGA;TTAATTG;+!Ubx#MA0094.2;-1;4.4535e-05;0.0211987;0.00448378;4;TTAATTGA;TAAT;+!CG15696#MA0176.1;0;4.78526e-05;0.0227778;0.00448378;7;TTAATTGA;TTAATTA;+!NK7.1#MA0196.1;0;4.78526e-05;0.0227778;0.00448378;7;TTAATTGA;TTAATTG;+!hbn#MA0226.1;0;4.78526e-05;0.0227778;0.00448378;7;TTAATTGA;TTAATTA;+!B-H2#MA0169.1;0;5.37807e-05;0.0255996;0.00453532;7;TTAATTGA;TTAATTG;+!CG32532#MA0179.1;0;6.70702e-05;0.0319254;0.00514184;7;TTAATTGA;TTAATTA;+!CG13424#MA0175.1;0;8.25554e-05;0.0392964;0.00580157;7;TTAATTGA;TTAATTG;+!slou#MA0245.1;0;0.000111033;0.0528516;0.0072026;7;TTAATTGA;TTAATTA;+!YOX1#MA0433.1;0;0.000123301;0.0586912;0.0074271;8;TTAATTGA;TTAATTAA;+!tup#MA0248.1;0;0.000134023;0.063795;0.00753477;7;TTAATTGA;TTAATTG;+!en#MA0220.1;0;0.000160751;0.0765177;0.00811023;7;TTAATTGA;TTAATTA;+!bsh#MA0214.1;0;0.000175786;0.0836741;0.00811023;7;TTAATTGA;TTAATTG;+!Nkx2-5#MA0063.1;0;0.000192345;0.0915564;0.00811023;7;TTAATTGA;TTAATTG;+!B-H1#MA0168.1;0;0.000192345;0.0915564;0.00811023;7;TTAATTGA;TTAATTG;+!unpg#MA0251.1;0;0.000192345;0.0915564;0.00811023;7;TTAATTGA;TTAATTA;+!YHP1#MA0426.1;-1;0.000219585;0.104523;0.0088179;6;TTAATTGA;TAATTG;+!repo#MA0240.1;0;0.000230904;0.10991;0.00885095;7;TTAATTGA;TTAATTA;+!PHDP#MA0457.1;0;0.00035903;0.170898;0.0131639;7;TTAATTGA;TTAATTA;+!C15#MA0170.1;0;0.000442808;0.210777;0.0155591;7;TTAATTGA;TTAATTA;+!CG32105#MA0178.1;0;0.000591933;0.28176;0.018488;7;TTAATTGA;TTAATTA;+!Vsx1#MA0181.1;0;0.000591933;0.28176;0.018488;7;TTAATTGA;TTAATTA;+!HGTX#MA0191.1;0;0.000591933;0.28176;0.018488;7;TTAATTGA;TTAATTA;+!otp#MA0236.1;0;0.000708625;0.337305;0.0213422;7;TTAATTGA;TTAATTA;+!OdsH#MA0455.1;0;0.000772291;0.36761;0.0216094;7;TTAATTGA;CTAATTA;+!OdsH#MA0455.1;0;0.000772291;0.36761;0.0216094;7;TTAATTGA;CTAATTA;+!Ubx#MA0094.2;1;0.000794372;0.378121;0.0216094;7;TTAATTGA;TTTAATTA;+!Rx#MA0202.1;0;0.000910447;0.433373;0.0239931;7;TTAATTGA;CTAATTA;+!Lhx3#MA0135.1;3;0.00101773;0.484437;0.0260075;8;TTAATTGA;AAATTAATTAATC;+!Lim1#MA0194.1;0;0.00132858;0.632405;0.0329527;7;TTAATTGA;TTAATTA;+!CG9876#MA0184.1;0;0.00142725;0.679369;0.0343884;7;TTAATTGA;CTAATTA;+!Lim3#MA0195.1;0;0.00164177;0.781485;0.0374191;7;TTAATTGA;TTAATTA;+!abd-A#MA0206.1;0;0.00164177;0.781485;0.0374191;7;TTAATTGA;TTAATTA;+!al#MA0208.1;0;0.00175754;0.836591;0.0390035;7;TTAATTGA;TTAATTA;-!SMP1#MA0383.1;7;0.00187229;0.89121;0.0396275;8;TTAATTGA;TGCTAATTTAATTATAGGTAA;-!CG11294#MA0172.1;0;0.00187964;0.894709;0.0396275;7;TTAATTGA;TTAATTA;+!Pph13#MA0200.1;0;0.00200832;0.955958;0.0398487;7;TTAATTGA;CTAATTA;+!zen2#MA0257.1;0;0.00200832;0.955958;0.0398487;7;TTAATTGA;TTAATTA;+!Awh#MA0167.1;0;0.00214386;1.02048;0.041089;7;TTAATTGA;TTAATTA;+!CG4328#MA0182.1;0;0.00228677;1.0885;0.0419224;7;TTAATTGA;TTTATTA;+!ftz#MA0225.1;0;0.00228677;1.0885;0.0419224;7;TTAATTGA;TTAATGA;+!exex#MA0224.1;0;0.00243728;1.16015;0.0420419;7;TTAATTGA;GTAATTA;+!exex#MA0224.1;0;0.00243728;1.16015;0.0420419;7;TTAATTGA;GTAATTA;+!E5#MA0189.1;0;0.00293968;1.39929;0.0481263;7;TTAATTGA;TTAATTA;+!inv#MA0229.1;1;0.00296759;1.41257;0.0481263;7;TTAATTGA;TCTAATTA;+!Dll#MA0187.1;-1;0.00312606;1.488;0.0488185;7;TTAATTGA;TAATTAC;+!cad#MA0216.1;0;0.00312606;1.488;0.0488185;7;TTAATTGA;TTTATTG;+!Dr#MA0188.1;-1;0.00332182;1.58119;0.0498982;7;TTAATTGA;TAATTGG;-!lab#MA0230.1;0;0.00332182;1.58119;0.0498982;7;TTAATTGA;TTAATTA;+!ems#MA0219.1;0;0.00352815;1.6794;0.0498982;7;TTAATTGA;TTAATGA;+!ro#MA0241.1;0;0.00352815;1.6794;0.0498982;7;TTAATTGA;CTAATTA;+!H2.0#MA0448.1;0;0.00352815;1.6794;0.0498982;7;TTAATTGA;TTAATTA;+!HAT5#MA0008.1;1;0.00358156;1.70482;0.0498982;7;TTAATTGA;AATAATTG;-!Pdx1#MA0132.1;0;0.00360938;1.71807;0.0498982;6;TTAATTGA;CTAATT;+!Nobox#MA0125.1;-1;0.00380843;1.81281;0.0518007;7;TTAATTGA;TAATTGGT;+!Oct#MA0197.1;1;0.00429916;2.0464;0.0575473;7;TTAATTGA;TTTAATTA;+!onecut#MA0235.1;0;0.0044761;2.13062;0.0589795;7;TTAATTGA;TTGATTT;+!CG18599#MA0177.1;0;0.00474891;2.26048;0.0609755;7;TTAATTGA;CTAATTA;+!lbl#MA0232.1;-1;0.00480691;2.28809;0.0609755;6;TTAATTGA;TAATTA;+!CG7056#MA0183.1;-1;0.00484449;2.30598;0.0609755;7;TTAATTGA;TAATTAAA;-!ap#MA0209.1;0;0.00567187;2.69981;0.0683298;7;TTAATTGA;CTAATTA;+!Vsx2#MA0180.1;1;0.00618695;2.94499;0.0706904;8;TTAATTGA;TTTAATTAG;+!Antp#MA0166.1;0;0.00637078;3.03249;0.0706904;7;TTAATTGA;TTAATGA;+!bap#MA0211.1;0;0.00637078;3.03249;0.0706904;7;TTAATTGA;TTAAGTG;+!btn#MA0215.1;0;0.00754471;3.59128;0.0826291;7;TTAATTGA;TTAATGA;+!ind#MA0228.1;0;0.00841524;4.00566;0.0865435;7;TTAATTGA;CTAATTA;+!ARID3A#MA0151.1;1;0.00875403;4.16692;0.088943;5;TTAATTGA;TTTAAT;-!CG42234#MA0174.1;0;0.00936559;4.45802;0.0918371;7;TTAATTGA;TTTATTA;+!pb#MA0238.1;0;0.00936559;4.45802;0.0918371;7;TTAATTGA;TTAATTA;+!eve#MA0221.1;0;0.00987316;4.69962;0.0937566;7;TTAATTGA;CTAATGA;+!PBX1#MA0070.1;1;0.011038;5.2541;0.0969621;8;TTAATTGA;TTTGATTGATGG;-!HOXA5#MA0158.1;2;0.0119718;5.6986;0.101554;6;TTAATTGA;CACTAATT;+!HNF1A#MA0046.1;2;0.0134658;6.4097;0.110249;8;TTAATTGA;GGTTAATAATTAAC;+!SPT2#MA0387.1;4;0.0137222;6.53177;0.111268;6;TTAATTGA;TTCTTTAATT;-!ATHB-5#MA0110.1;1;0.0151463;7.20962;0.120498;8;TTAATTGA;AATAATTGG;-!MATALPHA2#MA0328.1;3;0.0176838;8.41749;0.130813;6;TTAATTGA;CATGTAATT;+!PHO2#MA0356.1;0;0.0188282;8.96223;0.136878;6;TTAATTGA;ATAATA;+!Dfd#MA0186.1;0;0.0208279;9.91409;0.145158;7;TTAATTGA;TTAATGA;+!Scr#MA0203.1;0;0.0208279;9.91409;0.145158;7;TTAATTGA;TTAATGA;+ | |||
}} | }} | ||
Latest revision as of 14:08, 7 September 2012
Full Name: HXD4_f1
| Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
|---|---|---|---|---|---|---|---|---|
| unc-4#MA0250.1 | 0 | 9.75777e-06 | 0.0046447 | 0.00448378 | 7 | TTAATTGA | TTAATTG | + |
| Hmx#MA0192.1 | 0 | 1.64137e-05 | 0.00781294 | 0.00448378 | 7 | TTAATTGA | TTAATTG | + |
| CG34031#MA0444.1 | 0 | 2.79489e-05 | 0.0133037 | 0.00448378 | 7 | TTAATTGA | TTAATTG | + |
| Prrx2#MA0075.1 | -1 | 3.05463e-05 | 0.01454 | 0.00448378 | 5 | TTAATTGA | TAATT | - |
| CG11085#MA0171.1 | 0 | 3.23857e-05 | 0.0154156 | 0.00448378 | 7 | TTAATTGA | TTAATTG | + |
| Ubx#MA0094.2 | -1 | 4.4535e-05 | 0.0211987 | 0.00448378 | 4 | TTAATTGA | TAAT | + |
| CG15696#MA0176.1 | 0 | 4.78526e-05 | 0.0227778 | 0.00448378 | 7 | TTAATTGA | TTAATTA | + |
| NK7.1#MA0196.1 | 0 | 4.78526e-05 | 0.0227778 | 0.00448378 | 7 | TTAATTGA | TTAATTG | + |
| hbn#MA0226.1 | 0 | 4.78526e-05 | 0.0227778 | 0.00448378 | 7 | TTAATTGA | TTAATTA | + |
| B-H2#MA0169.1 | 0 | 5.37807e-05 | 0.0255996 | 0.00453532 | 7 | TTAATTGA | TTAATTG | + |
| CG32532#MA0179.1 | 0 | 6.70702e-05 | 0.0319254 | 0.00514184 | 7 | TTAATTGA | TTAATTA | + |
| CG13424#MA0175.1 | 0 | 8.25554e-05 | 0.0392964 | 0.00580157 | 7 | TTAATTGA | TTAATTG | + |
| slou#MA0245.1 | 0 | 0.000111033 | 0.0528516 | 0.0072026 | 7 | TTAATTGA | TTAATTA | + |
| YOX1#MA0433.1 | 0 | 0.000123301 | 0.0586912 | 0.0074271 | 8 | TTAATTGA | TTAATTAA | + |
| tup#MA0248.1 | 0 | 0.000134023 | 0.063795 | 0.00753477 | 7 | TTAATTGA | TTAATTG | + |
| en#MA0220.1 | 0 | 0.000160751 | 0.0765177 | 0.00811023 | 7 | TTAATTGA | TTAATTA | + |
| bsh#MA0214.1 | 0 | 0.000175786 | 0.0836741 | 0.00811023 | 7 | TTAATTGA | TTAATTG | + |
| Nkx2-5#MA0063.1 | 0 | 0.000192345 | 0.0915564 | 0.00811023 | 7 | TTAATTGA | TTAATTG | + |
| B-H1#MA0168.1 | 0 | 0.000192345 | 0.0915564 | 0.00811023 | 7 | TTAATTGA | TTAATTG | + |
| unpg#MA0251.1 | 0 | 0.000192345 | 0.0915564 | 0.00811023 | 7 | TTAATTGA | TTAATTA | + |
| YHP1#MA0426.1 | -1 | 0.000219585 | 0.104523 | 0.0088179 | 6 | TTAATTGA | TAATTG | + |
| repo#MA0240.1 | 0 | 0.000230904 | 0.10991 | 0.00885095 | 7 | TTAATTGA | TTAATTA | + |
| PHDP#MA0457.1 | 0 | 0.00035903 | 0.170898 | 0.0131639 | 7 | TTAATTGA | TTAATTA | + |
| C15#MA0170.1 | 0 | 0.000442808 | 0.210777 | 0.0155591 | 7 | TTAATTGA | TTAATTA | + |
| CG32105#MA0178.1 | 0 | 0.000591933 | 0.28176 | 0.018488 | 7 | TTAATTGA | TTAATTA | + |
| Vsx1#MA0181.1 | 0 | 0.000591933 | 0.28176 | 0.018488 | 7 | TTAATTGA | TTAATTA | + |
| HGTX#MA0191.1 | 0 | 0.000591933 | 0.28176 | 0.018488 | 7 | TTAATTGA | TTAATTA | + |
| otp#MA0236.1 | 0 | 0.000708625 | 0.337305 | 0.0213422 | 7 | TTAATTGA | TTAATTA | + |
| OdsH#MA0455.1 | 0 | 0.000772291 | 0.36761 | 0.0216094 | 7 | TTAATTGA | CTAATTA | + |
| OdsH#MA0455.1 | 0 | 0.000772291 | 0.36761 | 0.0216094 | 7 | TTAATTGA | CTAATTA | + |
| Ubx#MA0094.2 | 1 | 0.000794372 | 0.378121 | 0.0216094 | 7 | TTAATTGA | TTTAATTA | + |
| Rx#MA0202.1 | 0 | 0.000910447 | 0.433373 | 0.0239931 | 7 | TTAATTGA | CTAATTA | + |
| Lhx3#MA0135.1 | 3 | 0.00101773 | 0.484437 | 0.0260075 | 8 | TTAATTGA | AAATTAATTAATC | + |
| Lim1#MA0194.1 | 0 | 0.00132858 | 0.632405 | 0.0329527 | 7 | TTAATTGA | TTAATTA | + |
| CG9876#MA0184.1 | 0 | 0.00142725 | 0.679369 | 0.0343884 | 7 | TTAATTGA | CTAATTA | + |
| Lim3#MA0195.1 | 0 | 0.00164177 | 0.781485 | 0.0374191 | 7 | TTAATTGA | TTAATTA | + |
| abd-A#MA0206.1 | 0 | 0.00164177 | 0.781485 | 0.0374191 | 7 | TTAATTGA | TTAATTA | + |
| al#MA0208.1 | 0 | 0.00175754 | 0.836591 | 0.0390035 | 7 | TTAATTGA | TTAATTA | - |
| SMP1#MA0383.1 | 7 | 0.00187229 | 0.89121 | 0.0396275 | 8 | TTAATTGA | TGCTAATTTAATTATAGGTAA | - |
| CG11294#MA0172.1 | 0 | 0.00187964 | 0.894709 | 0.0396275 | 7 | TTAATTGA | TTAATTA | + |
| Pph13#MA0200.1 | 0 | 0.00200832 | 0.955958 | 0.0398487 | 7 | TTAATTGA | CTAATTA | + |
| zen2#MA0257.1 | 0 | 0.00200832 | 0.955958 | 0.0398487 | 7 | TTAATTGA | TTAATTA | + |
| Awh#MA0167.1 | 0 | 0.00214386 | 1.02048 | 0.041089 | 7 | TTAATTGA | TTAATTA | + |
| CG4328#MA0182.1 | 0 | 0.00228677 | 1.0885 | 0.0419224 | 7 | TTAATTGA | TTTATTA | + |
| ftz#MA0225.1 | 0 | 0.00228677 | 1.0885 | 0.0419224 | 7 | TTAATTGA | TTAATGA | + |
| exex#MA0224.1 | 0 | 0.00243728 | 1.16015 | 0.0420419 | 7 | TTAATTGA | GTAATTA | + |
| exex#MA0224.1 | 0 | 0.00243728 | 1.16015 | 0.0420419 | 7 | TTAATTGA | GTAATTA | + |
| E5#MA0189.1 | 0 | 0.00293968 | 1.39929 | 0.0481263 | 7 | TTAATTGA | TTAATTA | + |
| inv#MA0229.1 | 1 | 0.00296759 | 1.41257 | 0.0481263 | 7 | TTAATTGA | TCTAATTA | + |
| Dll#MA0187.1 | -1 | 0.00312606 | 1.488 | 0.0488185 | 7 | TTAATTGA | TAATTAC | + |
| cad#MA0216.1 | 0 | 0.00312606 | 1.488 | 0.0488185 | 7 | TTAATTGA | TTTATTG | + |
| Dr#MA0188.1 | -1 | 0.00332182 | 1.58119 | 0.0498982 | 7 | TTAATTGA | TAATTGG | - |
| lab#MA0230.1 | 0 | 0.00332182 | 1.58119 | 0.0498982 | 7 | TTAATTGA | TTAATTA | + |
| ems#MA0219.1 | 0 | 0.00352815 | 1.6794 | 0.0498982 | 7 | TTAATTGA | TTAATGA | + |
| ro#MA0241.1 | 0 | 0.00352815 | 1.6794 | 0.0498982 | 7 | TTAATTGA | CTAATTA | + |
| H2.0#MA0448.1 | 0 | 0.00352815 | 1.6794 | 0.0498982 | 7 | TTAATTGA | TTAATTA | + |
| HAT5#MA0008.1 | 1 | 0.00358156 | 1.70482 | 0.0498982 | 7 | TTAATTGA | AATAATTG | - |
| Pdx1#MA0132.1 | 0 | 0.00360938 | 1.71807 | 0.0498982 | 6 | TTAATTGA | CTAATT | + |
| Nobox#MA0125.1 | -1 | 0.00380843 | 1.81281 | 0.0518007 | 7 | TTAATTGA | TAATTGGT | + |
| Oct#MA0197.1 | 1 | 0.00429916 | 2.0464 | 0.0575473 | 7 | TTAATTGA | TTTAATTA | + |
| onecut#MA0235.1 | 0 | 0.0044761 | 2.13062 | 0.0589795 | 7 | TTAATTGA | TTGATTT | + |
| CG18599#MA0177.1 | 0 | 0.00474891 | 2.26048 | 0.0609755 | 7 | TTAATTGA | CTAATTA | + |
| lbl#MA0232.1 | -1 | 0.00480691 | 2.28809 | 0.0609755 | 6 | TTAATTGA | TAATTA | + |
| CG7056#MA0183.1 | -1 | 0.00484449 | 2.30598 | 0.0609755 | 7 | TTAATTGA | TAATTAAA | - |
| ap#MA0209.1 | 0 | 0.00567187 | 2.69981 | 0.0683298 | 7 | TTAATTGA | CTAATTA | + |
| Vsx2#MA0180.1 | 1 | 0.00618695 | 2.94499 | 0.0706904 | 8 | TTAATTGA | TTTAATTAG | + |
| Antp#MA0166.1 | 0 | 0.00637078 | 3.03249 | 0.0706904 | 7 | TTAATTGA | TTAATGA | + |
| bap#MA0211.1 | 0 | 0.00637078 | 3.03249 | 0.0706904 | 7 | TTAATTGA | TTAAGTG | + |
| btn#MA0215.1 | 0 | 0.00754471 | 3.59128 | 0.0826291 | 7 | TTAATTGA | TTAATGA | + |
| ind#MA0228.1 | 0 | 0.00841524 | 4.00566 | 0.0865435 | 7 | TTAATTGA | CTAATTA | + |
| ARID3A#MA0151.1 | 1 | 0.00875403 | 4.16692 | 0.088943 | 5 | TTAATTGA | TTTAAT | - |
| CG42234#MA0174.1 | 0 | 0.00936559 | 4.45802 | 0.0918371 | 7 | TTAATTGA | TTTATTA | + |
| pb#MA0238.1 | 0 | 0.00936559 | 4.45802 | 0.0918371 | 7 | TTAATTGA | TTAATTA | + |
| eve#MA0221.1 | 0 | 0.00987316 | 4.69962 | 0.0937566 | 7 | TTAATTGA | CTAATGA | + |
| PBX1#MA0070.1 | 1 | 0.011038 | 5.2541 | 0.0969621 | 8 | TTAATTGA | TTTGATTGATGG | - |
| HOXA5#MA0158.1 | 2 | 0.0119718 | 5.6986 | 0.101554 | 6 | TTAATTGA | CACTAATT | + |
| HNF1A#MA0046.1 | 2 | 0.0134658 | 6.4097 | 0.110249 | 8 | TTAATTGA | GGTTAATAATTAAC | + |
| SPT2#MA0387.1 | 4 | 0.0137222 | 6.53177 | 0.111268 | 6 | TTAATTGA | TTCTTTAATT | - |
| ATHB-5#MA0110.1 | 1 | 0.0151463 | 7.20962 | 0.120498 | 8 | TTAATTGA | AATAATTGG | - |
| MATALPHA2#MA0328.1 | 3 | 0.0176838 | 8.41749 | 0.130813 | 6 | TTAATTGA | CATGTAATT | + |
| PHO2#MA0356.1 | 0 | 0.0188282 | 8.96223 | 0.136878 | 6 | TTAATTGA | ATAATA | + |
| Dfd#MA0186.1 | 0 | 0.0208279 | 9.91409 | 0.145158 | 7 | TTAATTGA | TTAATGA | + |
| Scr#MA0203.1 | 0 | 0.0208279 | 9.91409 | 0.145158 | 7 | TTAATTGA | TTAATGA | + |
