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MacroAPE 1083:CNhs13464 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;0.3819186756839217;1.8073011854561392;34.35367125161043;0.9752212202447127!2;2.3426267257474374;0.3819186756839217;0.3819186756839217;34.411...")
 
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725214!10429-106D6;0.391538!10464-106H5;0.663666!10827-111C8;0.132414!10789-110H6;0.341733!10828-111C9;0.475826!10788-110H5;0.298518!10792-110H9;0.154202!10765-110E9;0.309755!10829-111D1;0.179101!10830-111D2;0.243903!10831-111D3;0.872933!10832-111D4;0.386763!10833-111D5;0.241504!10764-110E8;0.14751!10770-110F5;0.0301153!10399-106A3;0.352238!10400-106A4;0.0372383!10405-106A9;0.0298676!10834-111D6;0.0550716!10835-111D7;0.0589884!10836-111D8;0.573021!10837-111D9;0.356656!10699-109G6;0.559193!10802-111A1;0.601171!10796-110I4;0.11344!10010-101C1;0.482231!10810-111A9;0.00394344!10421-106C7;0.182857!10708-109H6;0.854791!12235-129G3;0.104688!12236-129G4;0.828028!12237-129G5;0.0358315!10167-103B5;0.620932!10151-102I7;0.154079!10428-106D5;0.163852!10795-110I3;0.894845!10805-111A4;0.513248!10052-101G7;0.019653!10189-103D9;0.00440267!10589-108D4;0.00873511!10425-106D2;0.9935!10427-106D4;0.308202!10702-109G9;0.360178!10432-106D9;0.778857!10496-107C1;0.293769!10718-109I7;0.381924!10011-101C2;0.108911!10053-101G8;0.0515077!10686-109F2;0.358248!10084-102B3;0.656376!10012-101C3;0.56296!10085-102B4;0.155623!10482-107A5;0.403503!10419-106C5;0.11761!10080-102A8;0.288905!10760-110E4;0.00496765!10709-109H7;0.0127792!10710-109H8;0.43313!10703-109H1;0.487127!10719-109I8;0.266084!10642-109A3;0.441573!10177-103C6;0.519637!10164-103B2;0.070682!10173-103C2;0.16658!10166-103B4;0.0509683!10083-102B2;0.017175!10188-103D8;0.14641!10552-107I3;0.159334!10553-107I4;0.333921!10013-101C4;0.139543!10536-107G5;0.0912554!10618-108G6;0.779803!10423-106C9;0.0409625!10785-110H2;0.189369!12238-129G6;0.0675455!12239-129G7;0.631074!12240-129G8;0.981612!10416-106C2;0.780059!10801-110I9;0.633514!10766-110F1;0.341734!10824-111C5;0.0691103!10825-111C6;0.501501!10826-111C7;0.615889!10454-106G4;0.739532!10409-106B4;0.607681!10638-108I8;0.165729!10636-108I6;0.227772!10513-107D9;0.678046!10420-106C6;0.346025!10082-102B1;0.0605253!10014-101C5;0.246231!10070-101I7;0.173347!10452-106G2;0.12326!10453-106G3;0.0160047!10449-106F8;0.496857!10042-101F6;0.267933!10069-101I6;0.504334!10193-103E4;0.150879!10631-108I1;0.511402!10438-106E6;0.369365!10488-107B2;0.0771898!10196-103E7;0.221303!10071-101I8;0.150067!10071-101I8;0.135366!10041-101F5;0.667015!10451-106G1;0.00684832!10450-106F9;0.166688!10604-108F1;0.0312045!10605-108F2;0.0844068!10606-108F3;0.202042!10603-108E9;0.0455988!10497-107C2;0.0338843!10448-106F7;0.0618494!10643-109A4;0.292625!10426-106D3;0.291023!10431-106D8;0.282332!10197-103E8;0.38199!10443-106F2;0.355926!10815-111B5;0.382399!10816-111B6;0.366642!10817-111B7;0.430835!10015-101C6;0.364414!10410-106B5;0.188206!10054-101G9;0.382179!10758-110E2;0.107199!10711-109H9;0.0210822!10040-101F4;0.303533!10470-106I2;0.368399!10415-106C1;0.0630996!10198-103E9;0.314814!10614-108G2;0.169012!10612-108F9;0.677372!10549-107H9;0.101616!10615-108G3;0.206713!10487-107B1;0.37941!10433-106E1;0.74817!10688-109F4;0.852731!10444-106F3;0.0578661!10444-106F3;0.024052!10485-107A8;0.0536359!10413-106B8;0.301669!10175-103C4;0.357978!10161-103A8;0.114159!12131-128D7;0.227276!10624-108H3;0.364687!10712-109I1;0.231276!10205-103F7;0.719554!10206-103F8;0.0470949!10207-103F9;0.172395!10050-101G5;0.00456045!10051-101G6;0.926085!10016-101C7;0.386177!10046-101G1;0.435164!10778-110G4;0.412875!10633-108I3;0.916788!10818-111B8;0.0632695!10819-111B9;0.135945!10820-111C1;0.203564!10484-107A7;0.174477!10808-111A7;0.398997!10169-103B7;0.135613!10153-102I9;0.143142!13425-144D5;0.178421!13433-144E4;0.0788188!13437-144E8;0.146263!11904-125F5;0.112248!11905-125F6;0.0431949!10039-101F3;0.101631!10791-110H8;0.388823!10017-101C8;0.183572!10045-101F9;0.269196!10509-107D5;0.50462!10839-111E2;0.853024!10692-109F8;0.0106965!10079-102A7;0.137844!10078-102A6;0.484133!10721-110A1;0.494433!10569-108B2;0.406577!10570-108B3;0.908291!10571-108B4;0.409624!10647-109A8;0.66666!10752-110D5;0.800098!10782-110G8;0.647481!10726-110A6;0.599103!10018-101C9;0.486874!10086-102B5;0.172862!10182-103D2;0.714505!10165-103B3;0.146167!10499-107C4;0.118813!10408-106B3;0.0408731!10019-101D1;0.0774616!10068-101I5;0.0146918!10075-102A3;0.0173144!10077-102A5;0.0161406!10727-110A7;0.197948!10775-110G1;0.878814!10412-106B7;0.888746!12231-129F8;0.135791!12232-129F9;1.09028e-05!12233-129G1;0.00015093!12234-129G2;0.000120565!10414-106B9;0.00107097!10170-103B8;0.00747222!10183-103D3;0.167967!10150-102I6;0.153572!10174-103C3;0.0932463!10155-103A2;0.0922985!10038-101F2;0.123853!10838-111E1;0.206648!10759-110E3;0.00663399!10514-107E1;0.0454862!10465-106H6;0.144937!10691-109F7;0.368739!10843-111E6;0.410167!10844-111E7;0.565684!11747-123G1;0.479671!11748-123G2;0.997893!11749-123G3;0.627969!11750-123G4;0.627612!11751-123G5;0.310565!11840-124H4;0.0902836!11752-123G6;0.146594!11753-123G7;0.412672!11754-123G8;0.285733!11755-123G9;0.570819!11756-123H1;0.20316!11833-124G6;0.453782!11760-123H5;0.564778!11836-124G9;0.338044!11758-123H3;0.882323!11835-124G8;0.889429!11762-123H7;0.419465!11838-124H2;0.718485!11757-123H2;0.671213!11759-123H4;0.223108!11761-123H6;0.741132!11842-124H6;0.256168!11837-124H1;0.343902!10568-108B1;0.96012!13230-141I8;0.0511927!13231-141I9;0.545315!10696-109G3;0.740467!10493-107B7;0.486543!10494-107B8;0.173671!10850-111F4;0.593791!10851-111F5;0.171232!10852-111F6;0.128622!10853-111F7;0.523798!10854-111F8;0.111928!10855-111F9;0.0863323!10856-111G1;0.858986!10847-111F1;0.33708!10846-111E9;0.245541!10848-111F2;0.0940157!10845-111E8;0.299209!10857-111G2;0.0601419!10858-111G3;0.313635!10156-103A3;0.0943482!11901-125F2;0.117601!11902-125F3;0.472666!11903-125F4;0.80111!10689-109F5;0.916573!10648-109A9;0.440432!10784-110H1;0.322379!10744-110C6;0.0597567!10772-110F7;0.394412!10474-106I6;0.0982236!10600-108E6;0.289139!10684-109E9;0.419653!12226-129F3;0.0710449!12227-129F4;0.041605!10508-107D4;0.00488419!10539-107G8;0.229909!10607-108F4;0.435823!10555-107I6;0.968821!10774-110F9;0.910852!10637-108I7;0.0601915!10663-109C6;0.843849!10728-110A8;0.726539!10729-110A9;0.225461!10430-106D7;0.38226!10730-110B1;0.99577!10813-111B3;0.875786!10812-111B2;0.978826!10037-101F1;0.32815!10172-103C1;0.298115!10163-103B1;0.15422!10076-102A4;0.124204!10073-102A1;0.53122!10036-101E9;0.423058!10195-103E6;0.476137!10277-104E7;0.346015!10434-106E2;0.495104!10550-107I1;0.0497193!10545-107H5;0.111765!10544-107H4;0.568378!10704-109H2;0.109189!10510-107D6;0.631755!10558-107I9;0.00517905!10020-101D2;0.375885!10732-110B3;0.00784237!10049-101G4;0.673895!10698-109G5;0.429385!10437-106E5;0.289018!10417-106C3;0.243958!10035-101E8;0.120246!10171-103B9;0.384669!10157-103A4;0.175045!10034-101E7;0.0979009!10072-101I9;0.357952!10199-103F1;0.496031!10200-103F2;0.188323!10697-109G4;0.0161324!10723-110A3;0.920553!10179-103C8;0.195644!10160-103A7;0.254771!10180-103C9;0.129969!10162-103A9;0.184061!10021-101D3;0.0120918!10840-111E3;0.794972!10706-109H4;0.37613!10033-101E6;0.94359!10032-101E5;0.348472!10490-107B4;0.464973!10439-106E7;0.160117!10022-101D4;0.470084!10176-103C5;0.110555!10469-106I1;0.094141!10067-101I4;0.183031!10411-106B6;0.76752!10471-106I3;0.105084!10030-101E3;0.0154491!10475-106I7;0.0521988!10787-110H4;0.191866!10477-106I9;0.113752!10695-109G2;0.0774381!11771-123I7;0.92809!11772-123I8;0.671295!11773-123I9;0.606311!10093-102C3;0.529315!10442-106F1;0.367615!10442-106F1;0.272526!10201-103F3;0.427693!10639-108I9;0.0268043!11843-124H7;0.347161!11841-124H5;0.128162!10693-109F9;0.0452501!10436-106E4;0.203665!10483-107A6;0.23988!10282-104F3;0.0682678!10023-101D5;0.120441!10066-101I3;0.0812582!10065-101I2;0.657107!10800-110I8;0.98966!10610-108F7;0.179304!10841-111E4;0.938761!10541-107H1;0.296388!10842-111E5;0.00281676!10562-108A4;0.337529!10024-101D6;0.952367!10064-101I1;0.458456!10609-108F6;0.943279!10048-101G3;0.528032!10781-110G7;0.0355238!10181-103D1;0.843581!10159-103A6;0.150631!10056-101H2;0.232315!10737-110B8;0.444924!10025-101D7;0.701282!10044-101F8;0.0574397!10424-106D1;0.026052!10463-106H4;0.138223!10616-108G4;0.217245!10486-107A9;0.318678!10062-101H8;0.586576!10202-103F4;0.346621!10158-103A5;0.189803!10441-106E9;0.237382!10031-101E4;0.159112!10063-101H9;0.464782!10063-101H9;0.739798!11763-123H8;0.48961!11765-123I1;0.545821!11768-123I4;0.0443671!10807-111A6;0.287533!10790-110H7;0.0269317!10798-110I6;0.027068!10786-110H3;0.590682!10591-108D6;0.00437429!10593-108D8;0.00811844!10590-108D5;0.0162788!10026-101D8;0.0975356!10096-102C6;0.213644!10168-103B6;0.963631!10154-103A1;0.269044!10209-103G2;0.184434!10061-101H7;0.14878!10027-101D9;0.950945!10043-101F7;0.193738!10783-110G9;0.00138781!10028-101E1;0.366922!10060-101H6;0.26616!10203-103F5;0.728063!10059-101H5;0.413949!10047-101G2;0.977275!10029-101E2;0.432131!10058-101H4;0.146463!10418-106C4;0.46831!10492-107B6;0.113221!10694-109G1;0.935643!10797-110I5;0.145377!10057-101H3;0.0812604!10100-102D1;0.609597!10055-101H1;0.069381!10204-103F6;0.608958!10191-103E2;0.0131081!10563-108A5;0.0431788
|name=CNhs13464_bu_f2
|name=CNhs13464_bu_f2
|tomtom_result=ARO80#MA0273.1;5;0.0120153;5.7193;1;12;GTTACTGAGAAT;ACATACTTGCCGAGAATTATC;-!Dfd#MA0186.1;-1;0.0129861;6.1814;1;7;GTTACTGAGAAT;TTAATGA;+!Scr#MA0203.1;-1;0.0184818;8.79732;1;7;GTTACTGAGAAT;TTAATGA;+!btn#MA0215.1;-1;0.02035;9.6866;1;7;GTTACTGAGAAT;TTAATGA;+
}}
}}

Latest revision as of 14:09, 7 September 2012

Full Name: CNhs13464_bu_f2

Motif matrix
POACGT
10.38191867568392171.807301185456139234.353671251610430.9752212202447127
22.34262672574743740.38191867568392170.381918675683921734.41164825587993
30.38191867568392170.38191867568392170.381918675683921736.37235630594344
423.0996876351481650.00.014.418424697847044
50.024.830162492945560.012.687949840049646
60.00.00.037.51811233299521
70.00.037.518112332995210.0
837.518112332995210.00.00.0
914.2484072319347540.023.2697051010604530.0
1036.082357991673111.14155911159283780.00.2941952297292565
1137.518112332995210.00.00.0
120.00.01.435754341322094336.08235799167311

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ARO80#MA0273.150.01201535.7193112GTTACTGAGAATACATACTTGCCGAGAATTATC-
Dfd#MA0186.1-10.01298616.181417GTTACTGAGAATTTAATGA+
Scr#MA0203.1-10.01848188.7973217GTTACTGAGAATTTAATGA+
btn#MA0215.1-10.020359.686617GTTACTGAGAATTTAATGA+
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