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MacroAPE 1083:CNhs11822 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;211.52527800273228;60.3218290106877;185.62912558254087;152.25396951159132!2;132.1822067069629;93.5765538018985;138.53494164579197;245.436499...")
 
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-108E3;0.604513!10717-109I6;0.0636014!10455-106G5;0.18599!10534-107G3;0.0537349!10429-106D6;0.688247!10464-106H5;0.78086!10827-111C8;0.777802!10789-110H6;0.0155219!10828-111C9;0.0606984!10788-110H5;0.421863!10792-110H9;0.993692!10765-110E9;0.041538!10829-111D1;0.154267!10830-111D2;0.131633!10831-111D3;0.0382652!10832-111D4;0.0222303!10833-111D5;0.712682!10764-110E8;0.148969!10770-110F5;0.932938!10399-106A3;0.156704!10400-106A4;0.407037!10405-106A9;0.446527!10834-111D6;0.518028!10835-111D7;0.171428!10836-111D8;0.985028!10837-111D9;0.613237!10699-109G6;0.242725!10802-111A1;0.911659!10796-110I4;0.916637!10010-101C1;0.29489!10810-111A9;0.636831!10421-106C7;0.618395!10708-109H6;0.17541!12235-129G3;0.55515!12236-129G4;0.938646!12237-129G5;0.639549!10167-103B5;0.05591!10151-102I7;0.248785!10428-106D5;0.123628!10795-110I3;0.107597!10805-111A4;0.272742!10052-101G7;0.034912!10189-103D9;0.691489!10589-108D4;0.94199!10425-106D2;0.926888!10427-106D4;0.374227!10702-109G9;0.0916596!10432-106D9;0.044915!10496-107C1;0.0183844!10718-109I7;0.0675428!10011-101C2;0.127752!10053-101G8;0.534751!10686-109F2;0.031826!10084-102B3;0.407363!10012-101C3;0.0698438!10085-102B4;0.0874964!10482-107A5;0.0192076!10419-106C5;0.67799!10080-102A8;0.13342!10760-110E4;0.476232!10709-109H7;0.305908!10710-109H8;0.381113!10703-109H1;0.473749!10719-109I8;0.324572!10642-109A3;0.0403953!10177-103C6;0.0713792!10164-103B2;0.0391127!10173-103C2;0.133295!10166-103B4;0.327374!10083-102B2;0.341661!10188-103D8;0.323181!10552-107I3;0.265787!10553-107I4;0.899331!10013-101C4;0.0215085!10536-107G5;0.981633!10618-108G6;0.110268!10423-106C9;0.372806!10785-110H2;0.293135!12238-129G6;0.713684!12239-129G7;0.589125!12240-129G8;0.367139!10416-106C2;0.895015!10801-110I9;0.393152!10766-110F1;0.50542!10824-111C5;0.217195!10825-111C6;0.757589!10826-111C7;0.747692!10454-106G4;0.783225!10409-106B4;0.455179!10638-108I8;0.864399!10636-108I6;0.669919!10513-107D9;0.0901341!10420-106C6;0.00323827!10082-102B1;0.0988195!10014-101C5;0.433522!10070-101I7;0.335779!10452-106G2;0.107584!10453-106G3;0.0497611!10449-106F8;0.109996!10042-101F6;0.12006!10069-101I6;0.00668616!10193-103E4;0.680752!10631-108I1;0.039241!10438-106E6;0.608298!10488-107B2;0.00689681!10196-103E7;0.649233!10071-101I8;0.0112767!10071-101I8;0.0939102!10041-101F5;0.0150009!10451-106G1;0.763019!10450-106F9;0.560838!10604-108F1;0.498404!10605-108F2;0.290277!10606-108F3;0.321168!10603-108E9;0.104629!10497-107C2;0.302185!10448-106F7;0.845774!10643-109A4;0.262791!10426-106D3;0.467209!10431-106D8;0.202222!10197-103E8;0.646743!10443-106F2;0.294896!10815-111B5;0.500362!10816-111B6;0.687478!10817-111B7;0.429383!10015-101C6;0.725047!10410-106B5;0.737645!10054-101G9;0.639319!10758-110E2;0.253884!10711-109H9;0.250089!10040-101F4;0.90225!10470-106I2;0.109179!10415-106C1;0.294914!10198-103E9;0.175108!10614-108G2;0.832138!10612-108F9;0.158166!10549-107H9;0.00208818!10615-108G3;0.068936!10487-107B1;0.884814!10433-106E1;0.597625!10688-109F4;0.537832!10444-106F3;0.896939!10444-106F3;0.276268!10485-107A8;0.418894!10413-106B8;0.20246!10175-103C4;0.597788!10161-103A8;0.00677373!12131-128D7;0.00731319!10624-108H3;0.179083!10712-109I1;0.21572!10205-103F7;0.351155!10206-103F8;0.441797!10207-103F9;0.269321!10050-101G5;0.920853!10051-101G6;0.761494!10016-101C7;0.0892056!10046-101G1;0.13859!10778-110G4;0.455166!10633-108I3;0.443551!10818-111B8;0.000940624!10819-111B9;0.0529238!10820-111C1;0.0701174!10484-107A7;0.0373333!10808-111A7;0.0804463!10169-103B7;0.140318!10153-102I9;0.275814!13425-144D5;0.065668!13433-144E4;0.00483675!13437-144E8;0.0160144!11904-125F5;0.0111517!11905-125F6;0.150579!10039-101F3;0.0562828!10791-110H8;0.0877833!10017-101C8;0.696745!10045-101F9;0.734281!10509-107D5;0.0850772!10839-111E2;0.827821!10692-109F8;0.747597!10079-102A7;0.508432!10078-102A6;0.120658!10721-110A1;0.101159!10569-108B2;0.76836!10570-108B3;0.296005!10571-108B4;0.583449!10647-109A8;0.611975!10752-110D5;0.577213!10782-110G8;0.482055!10726-110A6;0.31381!10018-101C9;0.994935!10086-102B5;0.414874!10182-103D2;0.2773!10165-103B3;0.021468!10499-107C4;0.0288735!10408-106B3;0.585154!10019-101D1;0.162878!10068-101I5;0.676323!10075-102A3;0.361106!10077-102A5;0.545995!10727-110A7;0.263048!10775-110G1;0.0188948!10412-106B7;0.049105!12231-129F8;0.164875!12232-129F9;0.424328!12233-129G1;0.397228!12234-129G2;0.3008!10414-106B9;0.519983!10170-103B8;0.00146681!10183-103D3;0.101755!10150-102I6;0.143295!10174-103C3;0.0947299!10155-103A2;0.0207383!10038-101F2;0.0291656!10838-111E1;0.0288897!10759-110E3;0.0179225!10514-107E1;0.10425!10465-106H6;0.275691!10691-109F7;0.976616!10843-111E6;0.557193!10844-111E7;0.520881!11747-123G1;0.057829!11748-123G2;0.70359!11749-123G3;0.578435!11750-123G4;0.261409!11751-123G5;0.0585411!11840-124H4;0.0204641!11752-123G6;0.146755!11753-123G7;0.179133!11754-123G8;0.731764!11755-123G9;0.840246!11756-123H1;0.817437!11833-124G6;0.559029!11760-123H5;0.504009!11836-124G9;0.470652!11758-123H3;0.802657!11835-124G8;0.306786!11762-123H7;0.815689!11838-124H2;0.880468!11757-123H2;0.395943!11759-123H4;0.958899!11761-123H6;0.506105!11842-124H6;0.455316!11837-124H1;0.484239!10568-108B1;0.670978!13230-141I8;0.744403!13231-141I9;0.351571!10696-109G3;0.417511!10493-107B7;0.534101!10494-107B8;0.643861!10850-111F4;0.431209!10851-111F5;0.481521!10852-111F6;0.68794!10853-111F7;0.927816!10854-111F8;0.859169!10855-111F9;0.669765!10856-111G1;0.95307!10847-111F1;0.646597!10846-111E9;0.313895!10848-111F2;0.732476!10845-111E8;0.885652!10857-111G2;0.379184!10858-111G3;0.237628!10156-103A3;0.962564!11901-125F2;0.0681649!11902-125F3;0.0132175!11903-125F4;0.00372408!10689-109F5;0.00863246!10648-109A9;0.196605!10784-110H1;0.512468!10744-110C6;0.00985308!10772-110F7;0.881299!10474-106I6;0.263223!10600-108E6;0.391542!10684-109E9;0.731567!12226-129F3;0.435118!12227-129F4;0.695091!10508-107D4;0.15823!10539-107G8;0.0658027!10607-108F4;0.484928!10555-107I6;0.0401516!10774-110F9;0.227408!10637-108I7;0.446684!10663-109C6;0.145845!10728-110A8;0.0884508!10729-110A9;0.454526!10430-106D7;0.594592!10730-110B1;0.0960772!10813-111B3;0.708394!10812-111B2;0.6792!10037-101F1;0.642446!10172-103C1;0.0607588!10163-103B1;0.0650574!10076-102A4;0.0387207!10073-102A1;0.0901187!10036-101E9;0.00391597!10195-103E6;0.0487874!10277-104E7;0.150289!10434-106E2;0.00146274!10550-107I1;0.062731!10545-107H5;0.0841288!10544-107H4;0.743454!10704-109H2;0.217173!10510-107D6;0.328318!10558-107I9;0.0242545!10020-101D2;0.527268!10732-110B3;0.724559!10049-101G4;0.901705!10698-109G5;0.358644!10437-106E5;0.259016!10417-106C3;0.888798!10035-101E8;0.00265222!10171-103B9;0.0441324!10157-103A4;0.0368283!10034-101E7;0.100689!10072-101I9;0.0399603!10199-103F1;0.0033793!10200-103F2;0.0459967!10697-109G4;0.533105!10723-110A3;0.210161!10179-103C8;0.0242132!10160-103A7;0.318174!10180-103C9;0.384731!10162-103A9;0.891643!10021-101D3;0.698837!10840-111E3;0.341202!10706-109H4;0.049071!10033-101E6;0.0655174!10032-101E5;0.0560552!10490-107B4;0.0629512!10439-106E7;0.938903!10022-101D4;0.00682546!10176-103C5;0.832769!10469-106I1;0.155828!10067-101I4;0.00411017!10411-106B6;0.0464765!10471-106I3;0.894171!10030-101E3;0.253909!10475-106I7;0.554522!10787-110H4;0.15127!10477-106I9;0.135989!10695-109G2;0.0641933!11771-123I7;0.68614!11772-123I8;0.620013!11773-123I9;0.90001!10093-102C3;0.70533!10442-106F1;0.0422484!10442-106F1;0.890207!10201-103F3;0.750623!10639-108I9;0.0885122!11843-124H7;0.0825595!11841-124H5;0.593255!10693-109F9;0.551456!10436-106E4;0.981788!10483-107A6;0.0204404!10282-104F3;0.000143602!10023-101D5;0.616935!10066-101I3;0.611793!10065-101I2;0.524882!10800-110I8;0.160845!10610-108F7;0.220801!10841-111E4;0.00158754!10541-107H1;0.617492!10842-111E5;0.000714074!10562-108A4;0.0947194!10024-101D6;0.113626!10064-101I1;0.445695!10609-108F6;0.0616257!10048-101G3;0.198623!10781-110G7;0.0783093!10181-103D1;0.11934!10159-103A6;0.0318737!10056-101H2;0.0518676!10737-110B8;0.00804637!10025-101D7;0.562867!10044-101F8;0.393961!10424-106D1;0.766906!10463-106H4;0.0712301!10616-108G4;0.110834!10486-107A9;0.633163!10062-101H8;0.36814!10202-103F4;0.525168!10158-103A5;0.114106!10441-106E9;0.00929111!10031-101E4;0.047581!10063-101H9;0.091047!10063-101H9;0.00883939!11763-123H8;0.238857!11765-123I1;0.0879905!11768-123I4;0.00553806!10807-111A6;0.0482128!10790-110H7;0.00904817!10798-110I6;0.0262498!10786-110H3;0.125488!10591-108D6;0.0042032!10593-108D8;0.00217465!10590-108D5;0.00339564!10026-101D8;0.0329512!10096-102C6;0.822113!10168-103B6;0.312177!10154-103A1;0.0232023!10209-103G2;0.0127595!10061-101H7;0.661884!10027-101D9;0.206144!10043-101F7;0.900832!10783-110G9;0.607275!10028-101E1;0.552378!10060-101H6;0.308059!10203-103F5;0.970352!10059-101H5;0.852917!10047-101G2;0.456111!10029-101E2;0.695163!10058-101H4;0.321301!10418-106C4;0.125287!10492-107B6;0.00108405!10694-109G1;0.115457!10797-110I5;0.397671!10057-101H3;0.120833!10100-102D1;0.918692!10055-101H1;0.916298!10204-103F6;0.0425107!10191-103E2;0.694416!10563-108A5;0.287212
|name=CNhs11822_bl_f2
|name=CNhs11822_bl_f2
|tomtom_result=pan#MA0237.1;0;7.15732e-05;0.0340688;0.0681377;8;ATTCAAAGA;GATCAAAG;-!HMG-I/Y#MA0045.1;0;0.00205721;0.979232;0.979232;9;ATTCAAAGA;CAACAAATGGAAAAAC;+!Sox2#MA0143.1;6;0.00766159;3.64692;1;9;ATTCAAAGA;TTTGCATAACAAAGG;-!NR2F1#MA0017.1;2;0.0079467;3.78263;1;9;ATTCAAAGA;AGGTTCAAAGGTCA;-!RME1#MA0370.1;-1;0.00879623;4.18701;1;8;ATTCAAAGA;TCCAAAGGAA;+!TBP#MA0108.2;0;0.00958137;4.56073;1;9;ATTCAAAGA;GTATAAAAGGCGGGG;+!TBP#MA0108.2;0;0.00958137;4.56073;1;9;ATTCAAAGA;GTATAAAAGGCGGGG;+!HNF4A#MA0114.1;1;0.0108368;5.15834;1;9;ATTCAAAGA;AGGCCAAAGGTCA;+!FKH1#MA0296.1;8;0.0109676;5.22057;1;9;ATTCAAAGA;TGAATTGTAAACAAAGAGGA;+!exd#MA0222.1;0;0.0121827;5.79898;1;8;ATTCAAAGA;TGTCAAAA;-!SOX10#MA0442.1;-2;0.0128058;6.09557;1;6;ATTCAAAGA;ACAAAG;-!Pou5f1#MA0142.1;7;0.0136703;6.50705;1;8;ATTCAAAGA;ATTTGCATAACAAAG;-!br_Z1#MA0010.1;5;0.0160906;7.65914;1;9;ATTCAAAGA;GTAATAAACAAATC;+!fkh#MA0446.1;2;0.0192502;9.1631;1;9;ATTCAAAGA;TTAAGCAAACA;-!SFP1#MA0378.1;0;0.0193257;9.19902;1;9;ATTCAAAGA;ATTGAAAAAAATTTTCTACGG;+
}}
}}

Latest revision as of 14:17, 7 September 2012

Full Name: CNhs11822_bl_f2

Motif matrix
POACGT
1211.5252780027322860.3218290106877185.62912558254087152.25396951159132
2132.182206706962993.5765538018985138.53494164579197245.43649995289866
3261.922271977043241.885438877471914422.055334088217673323.8671571648189
40.050229317272811526406.227270667845740.050229317272811526203.4024728051604
5609.73020210755250.00.00.0
6534.87110589302920.074.859096214522650.0
7609.73020210755250.00.00.0
8212.699403941134147.821243588098343270.0170769680115119.19247761030805
9275.56865771470767.92011816742664185.6035662519386280.63785997347982

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
pan#MA0237.107.15732e-050.03406880.06813778ATTCAAAGAGATCAAAG-
HMG-I/Y#MA0045.100.002057210.9792320.9792329ATTCAAAGACAACAAATGGAAAAAC+
Sox2#MA0143.160.007661593.6469219ATTCAAAGATTTGCATAACAAAGG-
NR2F1#MA0017.120.00794673.7826319ATTCAAAGAAGGTTCAAAGGTCA-
RME1#MA0370.1-10.008796234.1870118ATTCAAAGATCCAAAGGAA+
TBP#MA0108.200.009581374.5607319ATTCAAAGAGTATAAAAGGCGGGG+
TBP#MA0108.200.009581374.5607319ATTCAAAGAGTATAAAAGGCGGGG+
HNF4A#MA0114.110.01083685.1583419ATTCAAAGAAGGCCAAAGGTCA+
FKH1#MA0296.180.01096765.2205719ATTCAAAGATGAATTGTAAACAAAGAGGA+
exd#MA0222.100.01218275.7989818ATTCAAAGATGTCAAAA-
SOX10#MA0442.1-20.01280586.0955716ATTCAAAGAACAAAG-
Pou5f1#MA0142.170.01367036.5070518ATTCAAAGAATTTGCATAACAAAG-
br_Z1#MA0010.150.01609067.6591419ATTCAAAGAGTAATAAACAAATC+
fkh#MA0446.120.01925029.163119ATTCAAAGATTAAGCAAACA-
SFP1#MA0378.100.01932579.1990219ATTCAAAGAATTGAAAAAAATTTTCTACGG+
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