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MacroAPE 1083:CGCTTAAA,motif359: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;122.408;732.094;98.868;223.63!2;100.045;72.974;963.963;40.018!3;118.877;995.742;54.142;8.239!4;111.815;125.939;120.054;819.192!5;62.381;1.17...")
 
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8-111C9;0.901977!10788-110H5;0.165664!10792-110H9;0.729416!10765-110E9;0.832515!10829-111D1;0.507155!10830-111D2;0.310225!10831-111D3;0.620145!10832-111D4;0.276441!10833-111D5;0.969051!10764-110E8;0.882719!10770-110F5;0.730804!10399-106A3;0.924503!10400-106A4;0.980537!10405-106A9;0.998241!10834-111D6;0.966496!10835-111D7;0.862973!10836-111D8;0.871019!10837-111D9;0.924347!10699-109G6;0.999778!10802-111A1;0.618671!10796-110I4;0.177496!10010-101C1;0.100401!10810-111A9;0.687538!10421-106C7;0.867482!10708-109H6;0.788794!12235-129G3;0.0921073!12236-129G4;0.147289!12237-129G5;0.282399!10167-103B5;0.0988673!10151-102I7;0.716363!10428-106D5;0.940177!10795-110I3;0.205644!10805-111A4;0.969272!10052-101G7;0.993182!10189-103D9;0.753904!10589-108D4;0.394536!10425-106D2;0.58692!10427-106D4;0.0523176!10702-109G9;0.365818!10432-106D9;0.0937881!10496-107C1;0.641224!10718-109I7;0.638918!10011-101C2;0.899186!10053-101G8;0.454735!10686-109F2;0.957325!10084-102B3;0.614364!10012-101C3;0.866621!10085-102B4;0.806251!10482-107A5;0.664676!10419-106C5;0.830894!10080-102A8;0.809268!10760-110E4;0.230312!10709-109H7;0.989217!10710-109H8;0.368105!10703-109H1;0.797036!10719-109I8;0.799036!10642-109A3;0.147571!10177-103C6;0.254889!10164-103B2;0.891554!10173-103C2;0.77578!10166-103B4;0.499965!10083-102B2;0.676416!10188-103D8;0.677572!10552-107I3;0.923428!10553-107I4;0.796914!10013-101C4;0.881983!10536-107G5;0.75944!10618-108G6;0.00695552!10423-106C9;0.282926!10785-110H2;0.504853!12238-129G6;0.20185!12239-129G7;0.169058!12240-129G8;0.771954!10416-106C2;0.261248!10801-110I9;0.50784!10766-110F1;0.508793!10824-111C5;0.428162!10825-111C6;0.690152!10826-111C7;0.707514!10454-106G4;0.626974!10409-106B4;0.394057!10638-108I8;0.275733!10636-108I6;0.988938!10513-107D9;0.849767!10420-106C6;0.5477!10082-102B1;0.481117!10014-101C5;0.118355!10070-101I7;0.542231!10452-106G2;0.396597!10453-106G3;0.730054!10449-106F8;0.963339!10042-101F6;0.860243!10069-101I6;0.508946!10193-103E4;0.91338!10631-108I1;0.928798!10438-106E6;0.78951!10488-107B2;0.60372!10196-103E7;0.878153!10071-101I8;0.113924!10071-101I8;0.243299!10041-101F5;0.6796!10451-106G1;0.376075!10450-106F9;0.78494!10604-108F1;0.135619!10605-108F2;0.330892!10606-108F3;0.235179!10603-108E9;0.409034!10497-107C2;0.781031!10448-106F7;0.636828!10643-109A4;0.641811!10426-106D3;0.442734!10431-106D8;0.960259!10197-103E8;0.7886!10443-106F2;0.320957!10815-111B5;0.429326!10816-111B6;0.562697!10817-111B7;0.407794!10015-101C6;0.494009!10410-106B5;0.861996!10054-101G9;0.189905!10758-110E2;0.830927!10711-109H9;0.154478!10040-101F4;0.16322!10470-106I2;0.729783!10415-106C1;0.579201!10198-103E9;0.616823!10614-108G2;0.537095!10612-108F9;0.429334!10549-107H9;0.912271!10615-108G3;0.933809!10487-107B1;0.931705!10433-106E1;0.699712!10688-109F4;0.682579!10444-106F3;0.835435!10444-106F3;0.529231!10485-107A8;0.695804!10413-106B8;0.719064!10175-103C4;0.809086!10161-103A8;0.745099!12131-128D7;0.555585!10624-108H3;0.470621!10712-109I1;0.180722!10205-103F7;0.743378!10206-103F8;0.996544!10207-103F9;0.795844!10050-101G5;0.569031!10051-101G6;0.624013!10016-101C7;0.479864!10046-101G1;0.885828!10778-110G4;0.86831!10633-108I3;0.944467!10818-111B8;0.0772332!10819-111B9;0.892197!10820-111C1;0.924896!10484-107A7;0.960543!10808-111A7;0.990945!10169-103B7;0.655749!10153-102I9;0.761725!13425-144D5;0.849869!13433-144E4;0.219701!13437-144E8;0.464949!11904-125F5;0.470877!11905-125F6;0.769028!10039-101F3;0.629067!10791-110H8;0.757583!10017-101C8;0.213948!10045-101F9;0.338147!10509-107D5;0.033647!10839-111E2;0.963501!10692-109F8;0.752887!10079-102A7;0.403475!10078-102A6;0.767316!10721-110A1;0.573396!10569-108B2;0.90278!10570-108B3;0.283665!10571-108B4;0.567964!10647-109A8;0.457186!10752-110D5;0.242706!10782-110G8;0.651488!10726-110A6;0.446622!10018-101C9;0.766624!10086-102B5;0.0804547!10182-103D2;0.827849!10165-103B3;0.807146!10499-107C4;0.756484!10408-106B3;0.889541!10019-101D1;0.59465!10068-101I5;0.441822!10075-102A3;0.424443!10077-102A5;0.330956!10727-110A7;0.827142!10775-110G1;0.970223!10412-106B7;0.246092!12231-129F8;0.851336!12232-129F9;0.269013!12233-129G1;0.436103!12234-129G2;0.264332!10414-106B9;0.579104!10170-103B8;0.78281!10183-103D3;0.641936!10150-102I6;0.686612!10174-103C3;0.777543!10155-103A2;0.542601!10038-101F2;0.638492!10838-111E1;0.634603!10759-110E3;0.0809326!10514-107E1;0.336558!10465-106H6;0.353048!10691-109F7;0.0936511!10843-111E6;0.663787!10844-111E7;0.518843!11747-123G1;0.551561!11748-123G2;0.276793!11749-123G3;0.219772!11750-123G4;0.492802!11751-123G5;0.776729!11840-124H4;0.824472!11752-123G6;0.952394!11753-123G7;0.0453328!11754-123G8;0.533851!11755-123G9;0.344077!11756-123H1;0.983399!11833-124G6;0.943391!11760-123H5;0.469406!11836-124G9;0.894476!11758-123H3;0.347097!11835-124G8;0.542838!11762-123H7;0.736403!11838-124H2;0.638912!11757-123H2;0.845948!11759-123H4;0.386823!11761-123H6;0.75637!11842-124H6;0.733709!11837-124H1;0.802552!10568-108B1;0.734124!13230-141I8;0.945765!13231-141I9;0.806318!10696-109G3;0.974595!10493-107B7;0.0222019!10494-107B8;0.461716!10850-111F4;0.723364!10851-111F5;0.905001!10852-111F6;0.392645!10853-111F7;0.770809!10854-111F8;0.478632!10855-111F9;0.449682!10856-111G1;0.556898!10847-111F1;0.0679313!10846-111E9;0.815738!10848-111F2;0.686531!10845-111E8;0.900829!10857-111G2;0.531185!10858-111G3;0.773535!10156-103A3;0.781564!11901-125F2;0.877431!11902-125F3;0.70235!11903-125F4;0.733319!10689-109F5;0.850251!10648-109A9;0.273509!10784-110H1;0.152525!10744-110C6;0.197652!10772-110F7;0.0608563!10474-106I6;0.64038!10600-108E6;0.384264!10684-109E9;0.366359!12226-129F3;0.0822003!12227-129F4;0.234147!10508-107D4;0.722579!10539-107G8;0.844741!10607-108F4;0.864231!10555-107I6;0.141661!10774-110F9;0.984126!10637-108I7;0.122395!10663-109C6;0.0877501!10728-110A8;0.199926!10729-110A9;0.0414665!10430-106D7;0.953586!10730-110B1;0.613183!10813-111B3;0.261743!10812-111B2;0.228596!10037-101F1;0.469998!10172-103C1;0.821056!10163-103B1;0.617103!10076-102A4;0.973989!10073-102A1;0.919443!10036-101E9;0.674752!10195-103E6;0.886155!10277-104E7;0.875378!10434-106E2;0.258497!10550-107I1;0.628295!10545-107H5;0.820373!10544-107H4;0.0449781!10704-109H2;0.881666!10510-107D6;0.354466!10558-107I9;0.150896!10020-101D2;0.0163186!10732-110B3;0.444444!10049-101G4;0.591307!10698-109G5;0.385029!10437-106E5;0.0219527!10417-106C3;0.113538!10035-101E8;0.433125!10171-103B9;0.789819!10157-103A4;0.72783!10034-101E7;0.803307!10072-101I9;0.824681!10199-103F1;0.989109!10200-103F2;0.717347!10697-109G4;0.537614!10723-110A3;0.570064!10179-103C8;0.405905!10160-103A7;0.654419!10180-103C9;0.992417!10162-103A9;0.68544!10021-101D3;0.774456!10840-111E3;0.364236!10706-109H4;0.197307!10033-101E6;0.736094!10032-101E5;0.963037!10490-107B4;0.742392!10439-106E7;0.887514!10022-101D4;0.00717439!10176-103C5;0.390026!10469-106I1;0.80902!10067-101I4;0.0392285!10411-106B6;0.138898!10471-106I3;0.61291!10030-101E3;0.638051!10475-106I7;0.197299!10787-110H4;0.421691!10477-106I9;0.877121!10695-109G2;0.0139675!11771-123I7;0.498493!11772-123I8;0.0427793!11773-123I9;0.0235955!10093-102C3;0.0533026!10442-106F1;0.708289!10442-106F1;0.389438!10201-103F3;0.622813!10639-108I9;0.354619!11843-124H7;0.421507!11841-124H5;0.323054!10693-109F9;0.075131!10436-106E4;0.541905!10483-107A6;0.579377!10282-104F3;0.670181!10023-101D5;0.818496!10066-101I3;0.831747!10065-101I2;0.456291!10800-110I8;0.327617!10610-108F7;0.455972!10841-111E4;0.620599!10541-107H1;0.881079!10842-111E5;0.185333!10562-108A4;0.677572!10024-101D6;0.591287!10064-101I1;0.824376!10609-108F6;0.304289!10048-101G3;0.559449!10781-110G7;0.258521!10181-103D1;0.575796!10159-103A6;0.589184!10056-101H2;0.413584!10737-110B8;0.495426!10025-101D7;0.818897!10044-101F8;0.716144!10424-106D1;0.425937!10463-106H4;0.324652!10616-108G4;0.975939!10486-107A9;0.310658!10062-101H8;0.727972!10202-103F4;0.0482144!10158-103A5;0.857275!10441-106E9;0.328356!10031-101E4;0.541343!10063-101H9;0.911313!10063-101H9;0.811656!11763-123H8;0.897063!11765-123I1;0.489068!11768-123I4;0.966789!10807-111A6;0.652482!10790-110H7;0.150045!10798-110I6;0.3546!10786-110H3;0.227919!10591-108D6;0.411952!10593-108D8;0.772723!10590-108D5;0.686738!10026-101D8;0.607206!10096-102C6;0.974442!10168-103B6;0.591102!10154-103A1;0.914582!10209-103G2;0.568469!10061-101H7;0.889!10027-101D9;0.326763!10043-101F7;0.663972!10783-110G9;0.686639!10028-101E1;0.155879!10060-101H6;0.0755295!10203-103F5;0.00959555!10059-101H5;0.612709!10047-101G2;0.519481!10029-101E2;0.57227!10058-101H4;0.809989!10418-106C4;0.437074!10492-107B6;0.0264497!10694-109G1;0.110954!10797-110I5;0.174057!10057-101H3;0.148346!10100-102D1;0.528707!10055-101H1;0.97745!10204-103F6;0.142606!10191-103E2;0.227516!10563-108A5;0.439642
|name=CGCTTAAA,motif359,CNhs10645,T:1177.0(31.98%),B:14885.3(23.00%),P:1e-35
|name=CGCTTAAA,motif359,CNhs10645,T:1177.0(31.98%),B:14885.3(23.00%),P:1e-35
|tomtom_result=bap#MA0211.1;0;0.00316796;1.50795;1;7;CGCTTAAA;CACTTAA;-!Nkx2-5#MA0063.1;0;0.0130355;6.20488;1;7;CGCTTAAA;CAATTAA;-!Pax6#MA0069.1;4;0.017267;8.21908;1;8;CGCTTAAA;TTCACGCATGAGTT;+!YAP6#MA0418.1;2;0.0175018;8.33086;1;8;CGCTTAAA;GTCGCTTACGTAATCAGACC;-
}}
}}

Latest revision as of 14:26, 7 September 2012

Full Name: CGCTTAAA,motif359,CNhs10645,T:1177.0(31.98%),B:14885.3(23.00%),P:1e-35

Motif matrix
POACGT
1122.408732.09498.868223.63
2100.04572.974963.96340.018
3118.877995.74254.1428.239
4111.815125.939120.054819.192
562.3811.177291.896821.546
6902.75978.85962.381133.001
7931.007170.66530.60244.726
8901.58234.133240.1081.177

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
bap#MA0211.100.003167961.5079517CGCTTAAACACTTAA-
Nkx2-5#MA0063.100.01303556.2048817CGCTTAAACAATTAA-
Pax6#MA0069.140.0172678.2190818CGCTTAAATTCACGCATGAGTT+
YAP6#MA0418.120.01750188.3308618CGCTTAAAGTCGCTTACGTAATCAGACC-
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