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MacroAPE 1083:Motif247: Difference between revisions

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10455-106G5;0.633572!10534-107G3;0.0221032!10429-106D6;0.0583444!10464-106H5;0.00476525!10827-111C8;0.0165558!10789-110H6;0.289946!10828-111C9;0.663465!10788-110H5;0.784757!10792-110H9;0.0333568!10765-110E9;0.25639!10829-111D1;0.117117!10830-111D2;0.0833153!10831-111D3;0.284637!10832-111D4;0.880605!10833-111D5;0.153284!10764-110E8;0.109024!10770-110F5;0.153219!10399-106A3;0.550624!10400-106A4;0.162551!10405-106A9;0.158577!10834-111D6;0.150134!10835-111D7;0.182294!10836-111D8;0.0145476!10837-111D9;0.0229784!10699-109G6;0.21515!10802-111A1;0.0609228!10796-110I4;0.145028!10010-101C1;0.0134271!10810-111A9;0.00147781!10421-106C7;0.00474187!10708-109H6;0.144925!12235-129G3;0.541644!12236-129G4;0.284937!12237-129G5;0.762779!10167-103B5;0.299823!10151-102I7;0.750306!10428-106D5;0.824539!10795-110I3;0.547763!10805-111A4;0.185219!10052-101G7;0.00280954!10189-103D9;0.0190616!10589-108D4;0.0493858!10425-106D2;0.00259299!10427-106D4;0.223967!10702-109G9;0.160614!10432-106D9;0.144366!10496-107C1;0.338798!10718-109I7;0.246615!10011-101C2;0.106685!10053-101G8;0.0225613!10686-109F2;0.937894!10084-102B3;0.59947!10012-101C3;0.900097!10085-102B4;0.784416!10482-107A5;0.768334!10419-106C5;0.0626808!10080-102A8;0.00757947!10760-110E4;0.00480558!10709-109H7;0.0692993!10710-109H8;0.00067169!10703-109H1;0.0876358!10719-109I8;0.00660099!10642-109A3;0.0170452!10177-103C6;0.0268029!10164-103B2;0.8112!10173-103C2;0.853038!10166-103B4;0.401075!10083-102B2;0.74744!10188-103D8;0.559564!10552-107I3;0.594039!10553-107I4;0.160576!10013-101C4;0.0206025!10536-107G5;0.0177246!10618-108G6;0.974236!10423-106C9;0.339517!10785-110H2;0.261166!12238-129G6;0.324272!12239-129G7;0.0420557!12240-129G8;0.00753021!10416-106C2;0.0187226!10801-110I9;0.191782!10766-110F1;0.0818131!10824-111C5;0.138908!10825-111C6;0.000799251!10826-111C7;0.000248873!10454-106G4;0.000277648!10409-106B4;3.74515e-05!10638-108I8;0.152977!10636-108I6;0.226271!10513-107D9;0.162157!10420-106C6;0.328742!10082-102B1;0.00711242!10014-101C5;0.0821721!10070-101I7;0.0341712!10452-106G2;0.0910582!10453-106G3;0.0636025!10449-106F8;0.055295!10042-101F6;0.0506666!10069-101I6;0.866235!10193-103E4;0.191646!10631-108I1;0.886496!10438-106E6;0.00779116!10488-107B2;0.0500372!10196-103E7;0.146699!10071-101I8;0.121372!10071-101I8;0.0458845!10041-101F5;0.823053!10451-106G1;0.0175805!10450-106F9;0.0315843!10604-108F1;0.0443279!10605-108F2;0.366994!10606-108F3;0.423579!10603-108E9;0.400284!10497-107C2;0.697046!10448-106F7;0.382138!10643-109A4;0.113048!10426-106D3;0.102815!10431-106D8;0.175906!10197-103E8;0.259141!10443-106F2;0.0562778!10815-111B5;0.481464!10816-111B6;0.136193!10817-111B7;0.119392!10015-101C6;0.16002!10410-106B5;0.026639!10054-101G9;0.0313386!10758-110E2;0.230318!10711-109H9;0.52616!10040-101F4;0.5576!10470-106I2;0.88839!10415-106C1;0.0361159!10198-103E9;0.429316!10614-108G2;0.0360267!10612-108F9;0.0471998!10549-107H9;0.00533866!10615-108G3;0.00384669!10487-107B1;0.0461718!10433-106E1;0.0248445!10688-109F4;0.639753!10444-106F3;0.276157!10444-106F3;0.51449!10485-107A8;0.435397!10413-106B8;0.336256!10175-103C4;0.0823365!10161-103A8;0.842144!12131-128D7;0.738906!10624-108H3;0.0376262!10712-109I1;0.377727!10205-103F7;0.0252273!10206-103F8;0.0755849!10207-103F9;0.0999712!10050-101G5;0.000223295!10051-101G6;0.154976!10016-101C7;0.110202!10046-101G1;0.0595098!10778-110G4;0.25914!10633-108I3;0.111793!10818-111B8;0.0402128!10819-111B9;0.0279772!10820-111C1;0.0239197!10484-107A7;0.0248638!10808-111A7;0.071182!10169-103B7;0.139584!10153-102I9;0.96192!13425-144D5;0.692922!13433-144E4;0.306028!13437-144E8;0.253351!11904-125F5;0.24568!11905-125F6;0.212069!10039-101F3;0.0896826!10791-110H8;0.996543!10017-101C8;0.0803146!10045-101F9;8.73631e-05!10509-107D5;0.0476418!10839-111E2;0.0589533!10692-109F8;0.479862!10079-102A7;0.273887!10078-102A6;0.075535!10721-110A1;0.0723536!10569-108B2;0.00419054!10570-108B3;0.0889745!10571-108B4;0.0719438!10647-109A8;0.12292!10752-110D5;0.58455!10782-110G8;0.104064!10726-110A6;0.131089!10018-101C9;0.504273!10086-102B5;0.0450577!10182-103D2;0.788972!10165-103B3;0.699396!10499-107C4;0.577637!10408-106B3;0.16121!10019-101D1;0.14312!10068-101I5;0.015955!10075-102A3;0.0647976!10077-102A5;0.0133547!10727-110A7;0.0762667!10775-110G1;0.192044!10412-106B7;0.194294!12231-129F8;0.320154!12232-129F9;0.0113603!12233-129G1;0.00391287!12234-129G2;0.0294601!10414-106B9;0.165842!10170-103B8;0.0029803!10183-103D3;0.91109!10150-102I6;0.891344!10174-103C3;0.796065!10155-103A2;0.385994!10038-101F2;0.58007!10838-111E1;0.539296!10759-110E3;0.0743554!10514-107E1;0.324926!10465-106H6;0.00937698!10691-109F7;0.0845352!10843-111E6;0.968437!10844-111E7;0.00277823!11747-123G1;0.0730068!11748-123G2;0.0344295!11749-123G3;0.0661155!11750-123G4;0.0308069!11751-123G5;0.108881!11840-124H4;0.173908!11752-123G6;0.00596565!11753-123G7;0.280901!11754-123G8;0.23182!11755-123G9;0.0793715!11756-123H1;0.0767197!11833-124G6;0.00801919!11760-123H5;0.163691!11836-124G9;0.0649732!11758-123H3;0.372311!11835-124G8;0.17276!11762-123H7;0.0253086!11838-124H2;0.0650099!11757-123H2;0.0158968!11759-123H4;0.0175247!11761-123H6;0.0758908!11842-124H6;0.0870191!11837-124H1;0.239517!10568-108B1;0.0425467!13230-141I8;0.936211!13231-141I9;0.0145445!10696-109G3;0.0137464!10493-107B7;0.318012!10494-107B8;0.442835!10850-111F4;0.484872!10851-111F5;0.473072!10852-111F6;0.606184!10853-111F7;0.331457!10854-111F8;0.563139!10855-111F9;0.541315!10856-111G1;0.881276!10847-111F1;0.307934!10846-111E9;0.0644497!10848-111F2;0.976934!10845-111E8;0.852734!10857-111G2;0.397752!10858-111G3;0.413412!10156-103A3;0.773617!11901-125F2;0.876868!11902-125F3;0.38623!11903-125F4;0.468835!10689-109F5;0.383375!10648-109A9;0.330848!10784-110H1;0.68594!10744-110C6;0.0662192!10772-110F7;0.19173!10474-106I6;0.152829!10600-108E6;0.15539!10684-109E9;0.0374755!12226-129F3;0.305772!12227-129F4;0.0208539!10508-107D4;0.693391!10539-107G8;0.00906072!10607-108F4;0.0337637!10555-107I6;0.038314!10774-110F9;0.0343609!10637-108I7;0.00564695!10663-109C6;0.00702265!10728-110A8;0.0654845!10729-110A9;0.00642128!10430-106D7;0.150515!10730-110B1;0.0121217!10813-111B3;0.00344469!10812-111B2;0.728301!10037-101F1;0.30069!10172-103C1;0.990662!10163-103B1;0.9554!10076-102A4;0.847862!10073-102A1;0.915032!10036-101E9;0.673468!10195-103E6;0.874222!10277-104E7;0.921399!10434-106E2;0.873877!10550-107I1;0.0914569!10545-107H5;0.0165727!10544-107H4;0.262308!10704-109H2;0.0731196!10510-107D6;0.877089!10558-107I9;0.250533!10020-101D2;0.20625!10732-110B3;0.12353!10049-101G4;0.63601!10698-109G5;0.281657!10437-106E5;0.16103!10417-106C3;0.740214!10035-101E8;0.166129!10171-103B9;0.95359!10157-103A4;0.999315!10034-101E7;0.907646!10072-101I9;0.982332!10199-103F1;0.629148!10200-103F2;0.135286!10697-109G4;0.0704504!10723-110A3;0.0635827!10179-103C8;0.88516!10160-103A7;0.88542!10180-103C9;0.929686!10162-103A9;0.934072!10021-101D3;0.964573!10840-111E3;0.00750624!10706-109H4;0.165971!10033-101E6;0.243405!10032-101E5;0.856551!10490-107B4;0.905683!10439-106E7;0.0475687!10022-101D4;0.489588!10176-103C5;0.0266472!10469-106I1;0.944844!10067-101I4;0.278014!10411-106B6;0.126922!10471-106I3;0.0481534!10030-101E3;0.879275!10475-106I7;0.105481!10787-110H4;0.0080926!10477-106I9;0.0145489!10695-109G2;0.0196651!11771-123I7;0.879436!11772-123I8;0.655411!11773-123I9;0.727794!10093-102C3;0.401162!10442-106F1;0.168441!10442-106F1;0.477963!10201-103F3;0.180012!10639-108I9;0.114859!11843-124H7;0.26443!11841-124H5;0.254475!10693-109F9;0.372662!10436-106E4;0.201393!10483-107A6;0.0134856!10282-104F3;0.0138442!10023-101D5;0.637416!10066-101I3;0.333397!10065-101I2;0.34167!10800-110I8;0.138314!10610-108F7;0.0193436!10841-111E4;0.0122751!10541-107H1;0.0236249!10842-111E5;0.0462304!10562-108A4;0.0153856!10024-101D6;0.0205637!10064-101I1;0.0303091!10609-108F6;0.0422696!10048-101G3;0.00909904!10781-110G7;0.0384418!10181-103D1;0.0181753!10159-103A6;0.573673!10056-101H2;0.544484!10737-110B8;0.786205!10025-101D7;0.0986433!10044-101F8;0.0388631!10424-106D1;0.00803344!10463-106H4;0.116606!10616-108G4;0.0714945!10486-107A9;0.318113!10062-101H8;0.153182!10202-103F4;0.195437!10158-103A5;0.0348923!10441-106E9;0.526865!10031-101E4;0.0310138!10063-101H9;0.976743!10063-101H9;0.708398!11763-123H8;0.0445702!11765-123I1;0.00783426!11768-123I4;0.00689525!10807-111A6;0.0325164!10790-110H7;0.333379!10798-110I6;0.0427932!10786-110H3;0.625968!10591-108D6;0.108037!10593-108D8;0.0430295!10590-108D5;0.0679486!10026-101D8;0.00829814!10096-102C6;0.60564!10168-103B6;0.0380856!10154-103A1;0.628829!10209-103G2;0.879571!10061-101H7;0.112307!10027-101D9;0.417547!10043-101F7;0.197208!10783-110G9;0.665024!10028-101E1;0.742951!10060-101H6;0.0259262!10203-103F5;0.0676447!10059-101H5;0.152241!10047-101G2;0.266839!10029-101E2;0.14138!10058-101H4;0.0224518!10418-106C4;0.208858!10492-107B6;0.494767!10694-109G1;0.0762226!10797-110I5;0.608845!10057-101H3;0.452788!10100-102D1;0.113579!10055-101H1;0.00865991!10204-103F6;0.0899124!10191-103E2;0.0117343!10563-108A5;0.0228871
|name=motif247
|name=motif247
|tomtom_result=CUP2#MA0287.1;3;0.00106867;0.508686;0.855747;8;TTTTTCTG;CATTTCTGCTG;-!hb#MA0049.1;1;0.00200338;0.953611;0.855747;8;TTTTTCTG;TTTTTTATGC;-!dl_1#MA0022.1;4;0.00321842;1.53197;0.855747;8;TTTTTCTG;GGGGTTTTTCCC;+!EDS1#MA0294.1;1;0.00359558;1.71149;0.855747;8;TTTTTCTG;ATTTTTCCG;-!FEV#MA0156.1;0;0.00655656;3.12092;1;8;TTTTTCTG;ATTTCCTG;-!YPR196W#MA0437.1;1;0.00699719;3.33066;1;8;TTTTTCTG;ATTTCTCCG;+!NFATC2#MA0152.1;0;0.00923653;4.39659;1;7;TTTTTCTG;TTTTCCA;+!NDT80#MA0343.1;5;0.0117124;5.57511;1;8;TTTTTCTG;TTGCGTTTTTGTGGCCGGAAA;-!ttk#MA0460.1;1;0.0121682;5.79207;1;8;TTTTTCTG;ATTATCCTT;-!RGT1#MA0367.1;2;0.013138;6.2537;1;8;TTTTTCTG;AATTTTTCCGG;+!SFP1#MA0378.1;11;0.0148611;7.07389;1;8;TTTTTCTG;ATTGAAAAAAATTTTCTACGG;+!id1#MA0120.1;0;0.0188896;8.99144;1;8;TTTTTCTG;TTTTCCTTTTCG;+
}}
}}

Latest revision as of 14:28, 7 September 2012

Full Name: motif247

Motif matrix
POACGT
01578391196937118463
02315487076487121954
03161859753107129602
04219760863614128405
056913409801810274307
063318120706297613302
0738501449759134244
0801126110915119890

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

CUP2#MA0287.130.001068670.5086860.8557478TTTTTCTGCATTTCTGCTG-
hb#MA0049.110.002003380.9536110.8557478TTTTTCTGTTTTTTATGC-
dl_1#MA0022.140.003218421.531970.8557478TTTTTCTGGGGGTTTTTCCC+
EDS1#MA0294.110.003595581.711490.8557478TTTTTCTGATTTTTCCG-
FEV#MA0156.100.006556563.1209218TTTTTCTGATTTCCTG-
YPR196W#MA0437.110.006997193.3306618TTTTTCTGATTTCTCCG+
NFATC2#MA0152.100.009236534.3965917TTTTTCTGTTTTCCA+
NDT80#MA0343.150.01171245.5751118TTTTTCTGTTGCGTTTTTGTGGCCGGAAA-
ttk#MA0460.110.01216825.7920718TTTTTCTGATTATCCTT-
RGT1#MA0367.120.0131386.253718TTTTTCTGAATTTTTCCGG+
SFP1#MA0378.1110.01486117.0738918TTTTTCTGATTGAAAAAAATTTTCTACGG+
id1#MA0120.100.01888968.9914418TTTTTCTGTTTTCCTTTTCG+