MacroAPE 1083:TGGTYCTMRT,motif814: Difference between revisions
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(Created page with "{{Macroape_1083
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3;0.81977!10429-106D6;0.795496!10464-106H5;0.692278!10827-111C8;0.936325!10789-110H6;0.699036!10828-111C9;0.442753!10788-110H5;0.7597!10792-110H9;0.426236!10765-110E9;0.589688!10829-111D1;0.670222!10830-111D2;0.934228!10831-111D3;0.339783!10832-111D4;0.816031!10833-111D5;0.652778!10764-110E8;0.693308!10770-110F5;0.356359!10399-106A3;0.402145!10400-106A4;0.949809!10405-106A9;0.948467!10834-111D6;0.89753!10835-111D7;0.520572!10836-111D8;0.292158!10837-111D9;0.586103!10699-109G6;0.391592!10802-111A1;0.123483!10796-110I4;0.609981!10010-101C1;0.997096!10810-111A9;0.857888!10421-106C7;0.897815!10708-109H6;0.889292!12235-129G3;0.873022!12236-129G4;0.00179608!12237-129G5;0.0403924!10167-103B5;0.00112962!10151-102I7;0.869031!10428-106D5;0.832457!10795-110I3;0.596367!10805-111A4;0.998326!10052-101G7;0.609008!10189-103D9;0.537042!10589-108D4;0.172474!10425-106D2;0.65499!10427-106D4;0.979503!10702-109G9;0.830293!10432-106D9;0.175409!10496-107C1;0.717259!10718-109I7;0.569761!10011-101C2;0.512194!10053-101G8;0.307096!10686-109F2;0.239772!10084-102B3;0.52812!10012-101C3;0.670039!10085-102B4;0.744004!10482-107A5;0.884832!10419-106C5;0.617003!10080-102A8;0.561795!10760-110E4;0.42248!10709-109H7;0.57892!10710-109H8;0.648088!10703-109H1;0.344302!10719-109I8;0.8823!10642-109A3;0.668265!10177-103C6;0.434876!10164-103B2;0.938779!10173-103C2;0.848974!10166-103B4;0.572366!10083-102B2;0.443198!10188-103D8;0.361649!10552-107I3;0.572407!10553-107I4;0.689691!10013-101C4;0.810749!10536-107G5;0.880489!10618-108G6;0.699675!10423-106C9;0.853725!10785-110H2;0.794983!12238-129G6;0.581636!12239-129G7;0.00981946!12240-129G8;0.303301!10416-106C2;0.0695298!10801-110I9;0.901506!10766-110F1;0.940671!10824-111C5;0.358042!10825-111C6;0.538707!10826-111C7;0.568896!10454-106G4;0.615358!10409-106B4;0.758851!10638-108I8;0.459955!10636-108I6;0.897866!10513-107D9;0.771109!10420-106C6;0.961265!10082-102B1;0.988939!10014-101C5;0.159403!10070-101I7;0.11358!10452-106G2;0.798244!10453-106G3;0.65028!10449-106F8;0.944204!10042-101F6;0.884583!10069-101I6;0.477273!10193-103E4;0.488295!10631-108I1;0.677237!10438-106E6;0.571936!10488-107B2;0.70294!10196-103E7;0.6161!10071-101I8;0.0863962!10071-101I8;0.738302!10041-101F5;0.936079!10451-106G1;0.571617!10450-106F9;0.824019!10604-108F1;0.56867!10605-108F2;0.333564!10606-108F3;0.444603!10603-108E9;0.310027!10497-107C2;0.273121!10448-106F7;0.604412!10643-109A4;0.967248!10426-106D3;0.972846!10431-106D8;0.940762!10197-103E8;0.403616!10443-106F2;0.95534!10815-111B5;0.428652!10816-111B6;0.785696!10817-111B7;0.675486!10015-101C6;0.708178!10410-106B5;0.320105!10054-101G9;0.853613!10758-110E2;0.793162!10711-109H9;0.633125!10040-101F4;0.364202!10470-106I2;0.822748!10415-106C1;0.382426!10198-103E9;0.625439!10614-108G2;0.729532!10612-108F9;0.809488!10549-107H9;0.980464!10615-108G3;0.640216!10487-107B1;0.739405!10433-106E1;0.67833!10688-109F4;0.411707!10444-106F3;0.222379!10444-106F3;0.930878!10485-107A8;0.921229!10413-106B8;0.971162!10175-103C4;0.646205!10161-103A8;0.782077!12131-128D7;0.937904!10624-108H3;0.546693!10712-109I1;0.0539276!10205-103F7;0.382324!10206-103F8;0.970977!10207-103F9;0.696179!10050-101G5;0.51181!10051-101G6;0.436587!10016-101C7;0.568571!10046-101G1;0.36155!10778-110G4;0.918754!10633-108I3;0.251665!10818-111B8;0.764997!10819-111B9;0.480751!10820-111C1;0.558702!10484-107A7;0.529435!10808-111A7;0.617853!10169-103B7;0.816169!10153-102I9;0.876321!13425-144D5;0.745422!13433-144E4;0.840051!13437-144E8;0.952329!11904-125F5;0.888082!11905-125F6;0.196634!10039-101F3;0.0960591!10791-110H8;0.799937!10017-101C8;0.616926!10045-101F9;0.401233!10509-107D5;0.825444!10839-111E2;0.60361!10692-109F8;0.863926!10079-102A7;0.345856!10078-102A6;0.762108!10721-110A1;0.719957!10569-108B2;0.910928!10570-108B3;0.919802!10571-108B4;0.739092!10647-109A8;0.685827!10752-110D5;0.479896!10782-110G8;0.454973!10726-110A6;0.817907!10018-101C9;0.616263!10086-102B5;0.397157!10182-103D2;0.598949!10165-103B3;0.777324!10499-107C4;0.953565!10408-106B3;0.934174!10019-101D1;0.574012!10068-101I5;0.759331!10075-102A3;0.577395!10077-102A5;0.967755!10727-110A7;0.280463!10775-110G1;0.161955!10412-106B7;0.948717!12231-129F8;0.734764!12232-129F9;0.319663!12233-129G1;0.65063!12234-129G2;0.426461!10414-106B9;0.598518!10170-103B8;0.440594!10183-103D3;0.978091!10150-102I6;0.840305!10174-103C3;0.876516!10155-103A2;0.59126!10038-101F2;0.651676!10838-111E1;0.661909!10759-110E3;0.770903!10514-107E1;0.982786!10465-106H6;0.78095!10691-109F7;0.131054!10843-111E6;0.920285!10844-111E7;0.775995!11747-123G1;0.949267!11748-123G2;0.172766!11749-123G3;0.147876!11750-123G4;0.0966513!11751-123G5;0.484454!11840-124H4;0.189176!11752-123G6;0.202227!11753-123G7;0.561229!11754-123G8;0.282827!11755-123G9;0.193338!11756-123H1;0.734047!11833-124G6;0.0783884!11760-123H5;0.266138!11836-124G9;0.267443!11758-123H3;0.16223!11835-124G8;0.174568!11762-123H7;0.243662!11838-124H2;0.0430938!11757-123H2;0.0709643!11759-123H4;0.740766!11761-123H6;0.139225!11842-124H6;0.417839!11837-124H1;0.366385!10568-108B1;0.0893561!13230-141I8;0.907253!13231-141I9;0.187441!10696-109G3;0.193552!10493-107B7;0.50575!10494-107B8;0.640681!10850-111F4;0.573781!10851-111F5;0.209014!10852-111F6;0.538434!10853-111F7;0.628539!10854-111F8;0.0525005!10855-111F9;0.0737806!10856-111G1;0.48208!10847-111F1;0.997887!10846-111E9;0.980289!10848-111F2;0.537482!10845-111E8;0.679375!10857-111G2;0.98256!10858-111G3;0.645817!10156-103A3;0.0136042!11901-125F2;0.814673!11902-125F3;0.716417!11903-125F4;0.76478!10689-109F5;0.879722!10648-109A9;0.460144!10784-110H1;0.437551!10744-110C6;0.799813!10772-110F7;0.735121!10474-106I6;0.559429!10600-108E6;0.254737!10684-109E9;0.802199!12226-129F3;0.129385!12227-129F4;0.796724!10508-107D4;0.974736!10539-107G8;0.977549!10607-108F4;0.794992!10555-107I6;0.72691!10774-110F9;0.884348!10637-108I7;0.84997!10663-109C6;0.755178!10728-110A8;0.841019!10729-110A9;0.817122!10430-106D7;0.168289!10730-110B1;0.835543!10813-111B3;0.55702!10812-111B2;0.34344!10037-101F1;0.0359861!10172-103C1;0.76188!10163-103B1;0.997006!10076-102A4;0.871583!10073-102A1;0.808424!10036-101E9;0.983162!10195-103E6;0.722776!10277-104E7;0.790353!10434-106E2;0.689048!10550-107I1;0.487938!10545-107H5;0.850547!10544-107H4;0.607566!10704-109H2;0.970878!10510-107D6;0.202661!10558-107I9;0.618954!10020-101D2;0.797469!10732-110B3;0.592697!10049-101G4;0.410735!10698-109G5;0.290517!10437-106E5;0.720906!10417-106C3;0.18924!10035-101E8;0.825254!10171-103B9;0.930586!10157-103A4;0.97881!10034-101E7;0.868675!10072-101I9;0.809396!10199-103F1;0.994108!10200-103F2;0.0949668!10697-109G4;0.597412!10723-110A3;0.692718!10179-103C8;0.940006!10160-103A7;0.337416!10180-103C9;0.279105!10162-103A9;0.134327!10021-101D3;0.427356!10840-111E3;0.310362!10706-109H4;0.72397!10033-101E6;0.313885!10032-101E5;0.852049!10490-107B4;0.78172!10439-106E7;0.566738!10022-101D4;0.685006!10176-103C5;0.167186!10469-106I1;0.728545!10067-101I4;0.688105!10411-106B6;0.409892!10471-106I3;0.439431!10030-101E3;0.874999!10475-106I7;0.179238!10787-110H4;0.671756!10477-106I9;0.529798!10695-109G2;0.636535!11771-123I7;0.169252!11772-123I8;0.962081!11773-123I9;0.942488!10093-102C3;0.917346!10442-106F1;0.0487427!10442-106F1;0.994049!10201-103F3;0.91934!10639-108I9;0.354573!11843-124H7;0.979482!11841-124H5;0.79364!10693-109F9;0.208013!10436-106E4;0.329189!10483-107A6;0.736911!10282-104F3;0.425604!10023-101D5;0.39069!10066-101I3;0.626802!10065-101I2;0.434686!10800-110I8;0.559323!10610-108F7;0.915921!10841-111E4;0.916769!10541-107H1;0.685217!10842-111E5;0.750622!10562-108A4;0.974235!10024-101D6;0.722085!10064-101I1;0.14118!10609-108F6;0.877064!10048-101G3;0.416549!10781-110G7;0.372106!10181-103D1;0.8053!10159-103A6;0.61499!10056-101H2;0.527398!10737-110B8;0.259977!10025-101D7;0.258474!10044-101F8;0.283715!10424-106D1;0.569329!10463-106H4;0.740187!10616-108G4;0.282612!10486-107A9;0.72487!10062-101H8;0.173186!10202-103F4;0.599116!10158-103A5;0.183687!10441-106E9;0.914789!10031-101E4;0.75012!10063-101H9;0.760555!10063-101H9;0.934772!11763-123H8;0.928856!11765-123I1;0.138148!11768-123I4;0.198171!10807-111A6;0.247205!10790-110H7;0.841467!10798-110I6;0.990752!10786-110H3;0.511519!10591-108D6;0.810038!10593-108D8;0.869679!10590-108D5;0.653115!10026-101D8;0.354252!10096-102C6;0.738974!10168-103B6;0.982203!10154-103A1;0.82752!10209-103G2;0.811026!10061-101H7;0.745029!10027-101D9;0.687218!10043-101F7;0.237475!10783-110G9;0.402223!10028-101E1;0.0150888!10060-101H6;0.388411!10203-103F5;0.787055!10059-101H5;0.695471!10047-101G2;0.968749!10029-101E2;0.335164!10058-101H4;0.484297!10418-106C4;0.630219!10492-107B6;0.623411!10694-109G1;0.855025!10797-110I5;0.472836!10057-101H3;0.589103!10100-102D1;0.765587!10055-101H1;0.418004!10204-103F6;0.493616!10191-103E2;0.332157!10563-108A5;0.497516 | ||
|name=TGGTYCTMRT,motif814,CNhs12339,T:390.0(12.66%),B:5140.1(7.02%),P:1e-28 | |name=TGGTYCTMRT,motif814,CNhs12339,T:390.0(12.66%),B:5140.1(7.02%),P:1e-28 | ||
|tomtom_result=OPI1#MA0349.1;0;0.000867608;0.412981;0.825963;7;TGGTCCTAGT;CGGTTCG;-!Tal1::Gata1#MA0140.1;1;0.00544093;2.58988;1;10;TGGTCCTAGT;CTGGTGGGGACAGATAAG;+!Tcfcp2l1#MA0145.1;1;0.00845851;4.02625;1;10;TGGTCCTAGT;CTGGTTTGAACTGG;-!HAP3#MA0314.1;6;0.0110825;5.27525;1;9;TGGTCCTAGT;TCTGATTGGTTCAGA;+!HAP5#MA0316.1;1;0.0126376;6.01549;1;10;TGGTCCTAGT;TGGGATCTGATTGGT;+!NDT80#MA0343.1;11;0.0140359;6.68109;1;10;TGGTCCTAGT;TTGCGTTTTTGTGGCCGGAAA;-!REST#MA0138.2;11;0.0149998;7.13989;1;10;TGGTCCTAGT;GGCGCTGTCCATGGTGCTGAA;- | |||
}} | }} |
Latest revision as of 14:53, 7 September 2012
Full Name: TGGTYCTMRT,motif814,CNhs12339,T:390.0(12.66%),B:5140.1(7.02%),P:1e-28
Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
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|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
---|---|---|---|---|---|---|---|---|
OPI1#MA0349.1 | 0 | 0.000867608 | 0.412981 | 0.825963 | 7 | TGGTCCTAGT | CGGTTCG | - |
Tal1::Gata1#MA0140.1 | 1 | 0.00544093 | 2.58988 | 1 | 10 | TGGTCCTAGT | CTGGTGGGGACAGATAAG | + |
Tcfcp2l1#MA0145.1 | 1 | 0.00845851 | 4.02625 | 1 | 10 | TGGTCCTAGT | CTGGTTTGAACTGG | - |
HAP3#MA0314.1 | 6 | 0.0110825 | 5.27525 | 1 | 9 | TGGTCCTAGT | TCTGATTGGTTCAGA | + |
HAP5#MA0316.1 | 1 | 0.0126376 | 6.01549 | 1 | 10 | TGGTCCTAGT | TGGGATCTGATTGGT | + |
NDT80#MA0343.1 | 11 | 0.0140359 | 6.68109 | 1 | 10 | TGGTCCTAGT | TTGCGTTTTTGTGGCCGGAAA | - |
REST#MA0138.2 | 11 | 0.0149998 | 7.13989 | 1 | 10 | TGGTCCTAGT | GGCGCTGTCCATGGTGCTGAA | - |