MacroAPE 1083:EPAS1 si: Difference between revisions
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(Created page with "{{Macroape_1083
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02!10717-109I6;0.118698!10455-106G5;0.889506!10534-107G3;0.674241!10429-106D6;0.132105!10464-106H5;0.382914!10827-111C8;0.0314207!10789-110H6;0.380337!10828-111C9;0.0681914!10788-110H5;0.0632804!10792-110H9;0.093435!10765-110E9;0.446103!10829-111D1;0.816083!10830-111D2;0.351301!10831-111D3;0.584465!10832-111D4;0.362286!10833-111D5;0.48007!10764-110E8;0.602488!10770-110F5;0.613759!10399-106A3;0.0798274!10400-106A4;0.970721!10405-106A9;0.760772!10834-111D6;0.821969!10835-111D7;0.551537!10836-111D8;0.569797!10837-111D9;0.560974!10699-109G6;0.746289!10802-111A1;0.5277!10796-110I4;0.711903!10010-101C1;0.588876!10810-111A9;0.903813!10421-106C7;0.536098!10708-109H6;0.423831!12235-129G3;0.308082!12236-129G4;0.763419!12237-129G5;0.068166!10167-103B5;0.610981!10151-102I7;0.00317034!10428-106D5;0.00526543!10795-110I3;0.0476791!10805-111A4;0.261855!10052-101G7;0.917307!10189-103D9;0.256776!10589-108D4;0.448125!10425-106D2;0.142753!10427-106D4;0.609211!10702-109G9;0.198849!10432-106D9;0.212488!10496-107C1;0.525229!10718-109I7;0.634289!10011-101C2;0.73965!10053-101G8;0.270746!10686-109F2;0.390019!10084-102B3;0.0297457!10012-101C3;0.00496411!10085-102B4;0.00433688!10482-107A5;0.00425002!10419-106C5;0.64275!10080-102A8;0.28739!10760-110E4;0.456139!10709-109H7;0.117!10710-109H8;0.517969!10703-109H1;0.598242!10719-109I8;0.0443011!10642-109A3;4.10202e-05!10177-103C6;0.126849!10164-103B2;0.000443763!10173-103C2;0.000887283!10166-103B4;0.00767431!10083-102B2;0.00636442!10188-103D8;0.00227038!10552-107I3;0.000160516!10553-107I4;0.489951!10013-101C4;0.4163!10536-107G5;0.686633!10618-108G6;0.495922!10423-106C9;0.78919!10785-110H2;0.675793!12238-129G6;0.375037!12239-129G7;0.8782!12240-129G8;0.0321142!10416-106C2;0.936175!10801-110I9;0.00302359!10766-110F1;0.943422!10824-111C5;0.488419!10825-111C6;0.821116!10826-111C7;0.603927!10454-106G4;0.577044!10409-106B4;0.95692!10638-108I8;0.887543!10636-108I6;0.193301!10513-107D9;0.703779!10420-106C6;0.115289!10082-102B1;0.287559!10014-101C5;0.844663!10070-101I7;0.662787!10452-106G2;0.435158!10453-106G3;0.102532!10449-106F8;0.0214813!10042-101F6;0.0440584!10069-101I6;0.0497391!10193-103E4;0.622958!10631-108I1;0.00130943!10438-106E6;0.493449!10488-107B2;0.289168!10196-103E7;0.713699!10071-101I8;0.564155!10071-101I8;0.417155!10041-101F5;0.00471408!10451-106G1;0.382609!10450-106F9;0.83413!10604-108F1;0.508868!10605-108F2;0.982868!10606-108F3;0.690954!10603-108E9;0.609373!10497-107C2;0.510288!10448-106F7;0.0385236!10643-109A4;0.0543926!10426-106D3;0.327244!10431-106D8;0.577871!10197-103E8;0.483261!10443-106F2;0.79991!10815-111B5;0.325146!10816-111B6;0.682414!10817-111B7;0.773937!10015-101C6;0.560177!10410-106B5;0.52544!10054-101G9;0.931248!10758-110E2;0.0235104!10711-109H9;0.656652!10040-101F4;0.355274!10470-106I2;0.00271615!10415-106C1;0.593657!10198-103E9;0.746497!10614-108G2;0.722006!10612-108F9;0.397323!10549-107H9;0.186951!10615-108G3;0.434379!10487-107B1;0.0592243!10433-106E1;0.0141671!10688-109F4;0.241182!10444-106F3;0.417512!10444-106F3;0.00264772!10485-107A8;0.00484184!10413-106B8;0.974566!10175-103C4;0.0773136!10161-103A8;0.00460388!12131-128D7;0.0280496!10624-108H3;0.757146!10712-109I1;0.263988!10205-103F7;0.0529603!10206-103F8;0.658406!10207-103F9;0.977885!10050-101G5;0.520484!10051-101G6;0.684359!10016-101C7;0.482928!10046-101G1;0.665397!10778-110G4;0.872302!10633-108I3;0.00170526!10818-111B8;0.24389!10819-111B9;0.00701915!10820-111C1;0.0075957!10484-107A7;0.00864673!10808-111A7;0.616072!10169-103B7;0.443435!10153-102I9;0.00317406!13425-144D5;0.00651859!13433-144E4;0.480576!13437-144E8;0.39219!11904-125F5;0.321068!11905-125F6;0.506246!10039-101F3;0.788917!10791-110H8;0.00203603!10017-101C8;0.911674!10045-101F9;0.373974!10509-107D5;0.87328!10839-111E2;0.607873!10692-109F8;0.307031!10079-102A7;0.308667!10078-102A6;0.755578!10721-110A1;0.562646!10569-108B2;0.0844307!10570-108B3;0.513866!10571-108B4;0.347274!10647-109A8;0.212807!10752-110D5;0.569784!10782-110G8;0.86302!10726-110A6;0.0152241!10018-101C9;0.0370653!10086-102B5;0.116676!10182-103D2;0.639269!10165-103B3;0.0595602!10499-107C4;0.0265978!10408-106B3;0.417266!10019-101D1;0.250038!10068-101I5;0.735593!10075-102A3;0.203526!10077-102A5;0.935111!10727-110A7;0.795216!10775-110G1;0.811025!10412-106B7;0.449872!12231-129F8;0.665516!12232-129F9;0.877828!12233-129G1;0.767516!12234-129G2;0.976554!10414-106B9;0.82473!10170-103B8;0.0894267!10183-103D3;0.00407888!10150-102I6;0.00352679!10174-103C3;0.00594709!10155-103A2;0.0507608!10038-101F2;0.0321634!10838-111E1;0.0300004!10759-110E3;0.145324!10514-107E1;0.822141!10465-106H6;0.327399!10691-109F7;0.0157078!10843-111E6;0.276307!10844-111E7;0.178365!11747-123G1;0.0177283!11748-123G2;0.0947143!11749-123G3;0.0863118!11750-123G4;0.245097!11751-123G5;0.982543!11840-124H4;0.976506!11752-123G6;0.973127!11753-123G7;0.644655!11754-123G8;0.958763!11755-123G9;0.275359!11756-123H1;0.523338!11833-124G6;0.267516!11760-123H5;0.699021!11836-124G9;0.319033!11758-123H3;0.650781!11835-124G8;0.112099!11762-123H7;0.169588!11838-124H2;0.372632!11757-123H2;0.132356!11759-123H4;0.308778!11761-123H6;0.0808385!11842-124H6;0.777668!11837-124H1;0.781931!10568-108B1;0.0555113!13230-141I8;0.0374294!13231-141I9;0.283897!10696-109G3;0.155019!10493-107B7;0.333678!10494-107B8;0.815363!10850-111F4;0.0514928!10851-111F5;0.102164!10852-111F6;0.0559894!10853-111F7;0.123658!10854-111F8;0.000456254!10855-111F9;0.180844!10856-111G1;0.0792705!10847-111F1;0.0321627!10846-111E9;0.582267!10848-111F2;0.0150178!10845-111E8;0.290247!10857-111G2;0.953537!10858-111G3;0.0136026!10156-103A3;0.018403!11901-125F2;0.00616244!11902-125F3;0.115698!11903-125F4;0.577223!10689-109F5;0.304915!10648-109A9;0.816731!10784-110H1;0.506733!10744-110C6;0.714335!10772-110F7;0.47928!10474-106I6;0.009698!10600-108E6;0.212032!10684-109E9;0.000880448!12226-129F3;0.0752525!12227-129F4;0.265436!10508-107D4;0.243377!10539-107G8;0.0280615!10607-108F4;0.469961!10555-107I6;0.131745!10774-110F9;0.0840891!10637-108I7;0.0892488!10663-109C6;0.00499909!10728-110A8;0.013847!10729-110A9;0.111858!10430-106D7;0.0115558!10730-110B1;0.301498!10813-111B3;0.0328677!10812-111B2;0.468831!10037-101F1;0.0411405!10172-103C1;0.00118081!10163-103B1;0.0118586!10076-102A4;0.00982907!10073-102A1;0.00196521!10036-101E9;0.0105086!10195-103E6;0.00468919!10277-104E7;0.00341225!10434-106E2;0.237154!10550-107I1;0.582781!10545-107H5;0.0747462!10544-107H4;0.156575!10704-109H2;0.645024!10510-107D6;0.032216!10558-107I9;0.766889!10020-101D2;0.285899!10732-110B3;0.232251!10049-101G4;0.223985!10698-109G5;0.0202236!10437-106E5;0.945406!10417-106C3;0.693535!10035-101E8;0.811189!10171-103B9;0.00330713!10157-103A4;0.005332!10034-101E7;0.00432532!10072-101I9;0.0039556!10199-103F1;0.0102719!10200-103F2;0.0558395!10697-109G4;0.791363!10723-110A3;0.00381175!10179-103C8;0.556635!10160-103A7;0.119067!10180-103C9;0.320067!10162-103A9;0.00708064!10021-101D3;0.0799696!10840-111E3;0.843934!10706-109H4;0.0689688!10033-101E6;0.0984316!10032-101E5;0.0328927!10490-107B4;0.00359506!10439-106E7;0.553165!10022-101D4;0.245577!10176-103C5;0.387374!10469-106I1;0.000732529!10067-101I4;0.533682!10411-106B6;0.831128!10471-106I3;0.256208!10030-101E3;0.127046!10475-106I7;0.0432844!10787-110H4;0.0761797!10477-106I9;0.930123!10695-109G2;0.497301!11771-123I7;0.263911!11772-123I8;0.87058!11773-123I9;0.436739!10093-102C3;0.439318!10442-106F1;0.0117898!10442-106F1;0.563305!10201-103F3;0.827735!10639-108I9;0.657143!11843-124H7;0.332694!11841-124H5;0.0085983!10693-109F9;0.202141!10436-106E4;0.654625!10483-107A6;0.211846!10282-104F3;0.472108!10023-101D5;0.689259!10066-101I3;0.868048!10065-101I2;0.899893!10800-110I8;0.770089!10610-108F7;0.0727503!10841-111E4;0.641344!10541-107H1;0.926389!10842-111E5;0.524997!10562-108A4;0.0187867!10024-101D6;0.033739!10064-101I1;0.572387!10609-108F6;0.998823!10048-101G3;0.0226124!10781-110G7;0.572163!10181-103D1;0.358676!10159-103A6;0.0368714!10056-101H2;0.0624115!10737-110B8;0.05347!10025-101D7;0.0125454!10044-101F8;0.402914!10424-106D1;0.828154!10463-106H4;0.520895!10616-108G4;0.567171!10486-107A9;0.819479!10062-101H8;0.243558!10202-103F4;0.853212!10158-103A5;0.0563625!10441-106E9;0.177379!10031-101E4;0.79898!10063-101H9;0.00312663!10063-101H9;0.0103983!11763-123H8;0.135257!11765-123I1;0.0467801!11768-123I4;0.757747!10807-111A6;0.180552!10790-110H7;0.0714176!10798-110I6;0.177891!10786-110H3;0.0160768!10591-108D6;0.401915!10593-108D8;0.334069!10590-108D5;0.851697!10026-101D8;0.554927!10096-102C6;0.155644!10168-103B6;0.0763875!10154-103A1;0.0254984!10209-103G2;0.00868861!10061-101H7;0.347199!10027-101D9;0.5074!10043-101F7;0.0526796!10783-110G9;0.00433898!10028-101E1;0.984133!10060-101H6;0.0791319!10203-103F5;0.551868!10059-101H5;0.377364!10047-101G2;0.758882!10029-101E2;0.340815!10058-101H4;0.327055!10418-106C4;0.328188!10492-107B6;0.367072!10694-109G1;0.949765!10797-110I5;8.50397e-06!10057-101H3;0.661876!10100-102D1;0.511201!10055-101H1;0.389711!10204-103F6;0.425224!10191-103E2;0.390246!10563-108A5;0.408061 | ||
|name=EPAS1_si | |name=EPAS1_si | ||
|tomtom_result=YPR022C#MA0436.1;-7;0.000409181;0.19477;0.210958;6;GTGCGTACGTGGG;CGTGGGG;-!HIF1A::ARNT#MA0259.1;-4;0.000608374;0.289586;0.210958;8;GTGCGTACGTGGG;GGACGTGC;+!RAP1#MA0359.1;-1;0.000667774;0.31786;0.210958;10;GTGCGTACGTGGG;TGTATGGGTG;-!YGR067C#MA0425.1;-1;0.00192766;0.917566;0.380857;12;GTGCGTACGTGGG;TGAAAAAGTGGGGT;-!Egr1#MA0162.1;-5;0.00200929;0.956423;0.380857;8;GTGCGTACGTGGG;TGCGTGGGCGT;+!Arnt::Ahr#MA0006.1;-5;0.00271364;1.29169;0.428637;6;GTGCGTACGTGGG;TGCGTG;+!Myc#MA0147.1;-3;0.00375587;1.7878;0.470919;10;GTGCGTACGTGGG;CGCACGTGGC;+!HAC1#MA0310.1;-5;0.0040424;1.92418;0.470919;8;GTGCGTACGTGGG;CACGTGTC;-!RREB1#MA0073.1;1;0.00447198;2.12866;0.470919;13;GTGCGTACGTGGG;TGGGGGGGGGTGGTTTGGGG;-!Pax4#MA0068.1;7;0.00709454;3.377;0.672377;13;GTGCGTACGTGGG;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-!Mycn#MA0104.2;-3;0.0078643;3.74341;0.677573;10;GTGCGTACGTGGG;CGCACGTGGC;+!USF1#MA0093.1;-5;0.0108049;5.14314;0.742342;7;GTGCGTACGTGGG;CACGTGG;+!MIG2#MA0338.1;-7;0.0115579;5.50155;0.742342;6;GTGCGTACGTGGG;TGCGGGG;-!FOXF2#MA0030.1;1;0.0134794;6.41618;0.742342;13;GTGCGTACGTGGG;ATTGTTTACGTTTG;-!MYC::MAX#MA0059.1;-2;0.0135152;6.43321;0.742342;11;GTGCGTACGTGGG;GAGCACGTGGT;+!PHO4#MA0357.1;-4;0.0135832;6.46559;0.742342;8;GTGCGTACGTGGG;GCACGTGC;+!ADR1#MA0268.1;-8;0.014099;6.71112;0.742342;5;GTGCGTACGTGGG;GTGGGGT;-!MIG3#MA0339.1;-7;0.01505;7.16382;0.750711;6;GTGCGTACGTGGG;TGCGGGG;-!Mycn#MA0104.2;-5;0.0178148;8.47986;0.788294;6;GTGCGTACGTGGG;CACGTG;-!Klf4#MA0039.2;-5;0.0182849;8.70362;0.788294;8;GTGCGTACGTGGG;TGGGTGGGGC;+!EmBP-1#MA0128.1;-4;0.0182988;8.71023;0.788294;8;GTGCGTACGTGGG;ACACGTGG;+ | |||
}} | }} |
Latest revision as of 15:04, 7 September 2012
Full Name: EPAS1_si
Motif matrix | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
---|---|---|---|---|---|---|---|---|
YPR022C#MA0436.1 | -7 | 0.000409181 | 0.19477 | 0.210958 | 6 | GTGCGTACGTGGG | CGTGGGG | - |
HIF1A::ARNT#MA0259.1 | -4 | 0.000608374 | 0.289586 | 0.210958 | 8 | GTGCGTACGTGGG | GGACGTGC | + |
RAP1#MA0359.1 | -1 | 0.000667774 | 0.31786 | 0.210958 | 10 | GTGCGTACGTGGG | TGTATGGGTG | - |
YGR067C#MA0425.1 | -1 | 0.00192766 | 0.917566 | 0.380857 | 12 | GTGCGTACGTGGG | TGAAAAAGTGGGGT | - |
Egr1#MA0162.1 | -5 | 0.00200929 | 0.956423 | 0.380857 | 8 | GTGCGTACGTGGG | TGCGTGGGCGT | + |
Arnt::Ahr#MA0006.1 | -5 | 0.00271364 | 1.29169 | 0.428637 | 6 | GTGCGTACGTGGG | TGCGTG | + |
Myc#MA0147.1 | -3 | 0.00375587 | 1.7878 | 0.470919 | 10 | GTGCGTACGTGGG | CGCACGTGGC | + |
HAC1#MA0310.1 | -5 | 0.0040424 | 1.92418 | 0.470919 | 8 | GTGCGTACGTGGG | CACGTGTC | - |
RREB1#MA0073.1 | 1 | 0.00447198 | 2.12866 | 0.470919 | 13 | GTGCGTACGTGGG | TGGGGGGGGGTGGTTTGGGG | - |
Pax4#MA0068.1 | 7 | 0.00709454 | 3.377 | 0.672377 | 13 | GTGCGTACGTGGG | GGGGGGGGAGTGGAGTATTGGAAATTTTTC | - |
Mycn#MA0104.2 | -3 | 0.0078643 | 3.74341 | 0.677573 | 10 | GTGCGTACGTGGG | CGCACGTGGC | + |
USF1#MA0093.1 | -5 | 0.0108049 | 5.14314 | 0.742342 | 7 | GTGCGTACGTGGG | CACGTGG | + |
MIG2#MA0338.1 | -7 | 0.0115579 | 5.50155 | 0.742342 | 6 | GTGCGTACGTGGG | TGCGGGG | - |
FOXF2#MA0030.1 | 1 | 0.0134794 | 6.41618 | 0.742342 | 13 | GTGCGTACGTGGG | ATTGTTTACGTTTG | - |
MYC::MAX#MA0059.1 | -2 | 0.0135152 | 6.43321 | 0.742342 | 11 | GTGCGTACGTGGG | GAGCACGTGGT | + |
PHO4#MA0357.1 | -4 | 0.0135832 | 6.46559 | 0.742342 | 8 | GTGCGTACGTGGG | GCACGTGC | + |
ADR1#MA0268.1 | -8 | 0.014099 | 6.71112 | 0.742342 | 5 | GTGCGTACGTGGG | GTGGGGT | - |
MIG3#MA0339.1 | -7 | 0.01505 | 7.16382 | 0.750711 | 6 | GTGCGTACGTGGG | TGCGGGG | - |
Mycn#MA0104.2 | -5 | 0.0178148 | 8.47986 | 0.788294 | 6 | GTGCGTACGTGGG | CACGTG | - |
Klf4#MA0039.2 | -5 | 0.0182849 | 8.70362 | 0.788294 | 8 | GTGCGTACGTGGG | TGGGTGGGGC | + |
EmBP-1#MA0128.1 | -4 | 0.0182988 | 8.71023 | 0.788294 | 8 | GTGCGTACGTGGG | ACACGTGG | + |