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MacroAPE 1083:CNhs12625 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;215.30367472593346;71.88748467699261;123.2360608599994;129.57277973707448!2;219.26141264810977;97.16479031882145;199.3374476887731;24.236349...")
 
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8!10464-106H5;0.181546!10827-111C8;0.424877!10789-110H6;0.488302!10828-111C9;0.536037!10788-110H5;0.824244!10792-110H9;0.707845!10765-110E9;0.983131!10829-111D1;0.383057!10830-111D2;0.445745!10831-111D3;0.26968!10832-111D4;0.173547!10833-111D5;0.333405!10764-110E8;0.231526!10770-110F5;0.452016!10399-106A3;0.868068!10400-106A4;0.740668!10405-106A9;0.620814!10834-111D6;0.57726!10835-111D7;0.925949!10836-111D8;0.155128!10837-111D9;0.177348!10699-109G6;0.495216!10802-111A1;0.0851637!10796-110I4;0.10877!10010-101C1;0.260709!10810-111A9;0.129813!10421-106C7;0.134438!10708-109H6;0.722764!12235-129G3;0.280597!12236-129G4;0.187614!12237-129G5;0.389336!10167-103B5;0.254035!10151-102I7;0.219778!10428-106D5;0.68854!10795-110I3;0.489014!10805-111A4;0.243861!10052-101G7;0.0442575!10189-103D9;0.309057!10589-108D4;0.796122!10425-106D2;0.0720953!10427-106D4;0.400999!10702-109G9;0.132603!10432-106D9;0.40441!10496-107C1;0.00627534!10718-109I7;0.00418004!10011-101C2;0.489107!10053-101G8;0.213873!10686-109F2;0.728038!10084-102B3;0.0178242!10012-101C3;0.959574!10085-102B4;0.854452!10482-107A5;0.780869!10419-106C5;0.106528!10080-102A8;0.0770258!10760-110E4;0.28742!10709-109H7;0.23772!10710-109H8;0.0519847!10703-109H1;0.0187712!10719-109I8;0.563907!10642-109A3;0.00124821!10177-103C6;0.891209!10164-103B2;0.498856!10173-103C2;0.35334!10166-103B4;0.606702!10083-102B2;0.659613!10188-103D8;0.605077!10552-107I3;0.889374!10553-107I4;0.10802!10013-101C4;0.121158!10536-107G5;0.197008!10618-108G6;0.756444!10423-106C9;0.447373!10785-110H2;0.673602!12238-129G6;0.56497!12239-129G7;0.400842!12240-129G8;0.184446!10416-106C2;0.736406!10801-110I9;0.286031!10766-110F1;0.812631!10824-111C5;0.119014!10825-111C6;0.0969086!10826-111C7;0.104299!10454-106G4;0.0735609!10409-106B4;0.0912733!10638-108I8;0.210689!10636-108I6;0.0304805!10513-107D9;0.0919289!10420-106C6;0.0577704!10082-102B1;0.0633984!10014-101C5;0.782433!10070-101I7;0.694231!10452-106G2;0.579113!10453-106G3;0.092763!10449-106F8;0.237724!10042-101F6;0.264084!10069-101I6;0.540105!10193-103E4;0.519108!10631-108I1;0.651665!10438-106E6;0.0382784!10488-107B2;0.0826957!10196-103E7;0.0362012!10071-101I8;0.987682!10071-101I8;0.489133!10041-101F5;0.831623!10451-106G1;0.28315!10450-106F9;0.0718717!10604-108F1;0.190585!10605-108F2;0.259286!10606-108F3;0.0406996!10603-108E9;0.162532!10497-107C2;0.25421!10448-106F7;0.061353!10643-109A4;0.178748!10426-106D3;0.428747!10431-106D8;0.132913!10197-103E8;0.338365!10443-106F2;0.287422!10815-111B5;0.794633!10816-111B6;0.17583!10817-111B7;0.232018!10015-101C6;0.214036!10410-106B5;0.0594678!10054-101G9;0.00438836!10758-110E2;0.30876!10711-109H9;0.248643!10040-101F4;0.524233!10470-106I2;0.531131!10415-106C1;0.360042!10198-103E9;0.13938!10614-108G2;0.195717!10612-108F9;0.00444539!10549-107H9;0.0035103!10615-108G3;0.00388274!10487-107B1;0.202621!10433-106E1;0.0359977!10688-109F4;0.234089!10444-106F3;0.189326!10444-106F3;0.93104!10485-107A8;0.946795!10413-106B8;0.618211!10175-103C4;0.249957!10161-103A8;0.941044!12131-128D7;0.930142!10624-108H3;0.840304!10712-109I1;0.573206!10205-103F7;0.336435!10206-103F8;0.320413!10207-103F9;0.333277!10050-101G5;0.24825!10051-101G6;0.24414!10016-101C7;0.252917!10046-101G1;0.294555!10778-110G4;0.204891!10633-108I3;0.324825!10818-111B8;0.387705!10819-111B9;0.43109!10820-111C1;0.388351!10484-107A7;0.447271!10808-111A7;0.00602143!10169-103B7;0.0835215!10153-102I9;0.915995!13425-144D5;0.77455!13433-144E4;0.230024!13437-144E8;0.232747!11904-125F5;0.150888!11905-125F6;0.663949!10039-101F3;0.669506!10791-110H8;0.675326!10017-101C8;0.138621!10045-101F9;0.932702!10509-107D5;0.669604!10839-111E2;0.647002!10692-109F8;4.58925e-05!10079-102A7;0.00370322!10078-102A6;0.318937!10721-110A1;0.212023!10569-108B2;0.0170461!10570-108B3;0.405619!10571-108B4;0.249008!10647-109A8;0.302749!10752-110D5;0.747298!10782-110G8;0.0860421!10726-110A6;0.640935!10018-101C9;0.334805!10086-102B5;0.178122!10182-103D2;0.0484548!10165-103B3;0.447209!10499-107C4;0.403332!10408-106B3;0.000726942!10019-101D1;0.174786!10068-101I5;0.0537414!10075-102A3;0.0938649!10077-102A5;0.174457!10727-110A7;0.36626!10775-110G1;0.279404!10412-106B7;0.204825!12231-129F8;0.0400846!12232-129F9;0.696873!12233-129G1;0.448287!12234-129G2;0.583319!10414-106B9;0.885904!10170-103B8;0.0481802!10183-103D3;0.338321!10150-102I6;0.562595!10174-103C3;0.631417!10155-103A2;0.262257!10038-101F2;0.215159!10838-111E1;0.52582!10759-110E3;0.63925!10514-107E1;0.385799!10465-106H6;0.022377!10691-109F7;0.806326!10843-111E6;0.927349!10844-111E7;0.0796822!11747-123G1;0.0122305!11748-123G2;0.0560567!11749-123G3;0.11721!11750-123G4;0.0655441!11751-123G5;0.313076!11840-124H4;0.442053!11752-123G6;0.457103!11753-123G7;0.457249!11754-123G8;0.243157!11755-123G9;0.123412!11756-123H1;0.542971!11833-124G6;0.640407!11760-123H5;0.912445!11836-124G9;0.468324!11758-123H3;0.0558023!11835-124G8;0.172542!11762-123H7;0.226895!11838-124H2;0.117837!11757-123H2;0.355674!11759-123H4;0.809334!11761-123H6;0.265628!11842-124H6;0.380816!11837-124H1;0.44055!10568-108B1;0.210647!13230-141I8;0.124527!13231-141I9;0.0213957!10696-109G3;0.00954405!10493-107B7;0.782217!10494-107B8;0.890877!10850-111F4;0.802464!10851-111F5;0.279421!10852-111F6;0.398418!10853-111F7;0.477911!10854-111F8;0.0655857!10855-111F9;0.90995!10856-111G1;0.565073!10847-111F1;0.284333!10846-111E9;0.584067!10848-111F2;0.623281!10845-111E8;0.204574!10857-111G2;0.0467458!10858-111G3;0.503444!10156-103A3;0.0902306!11901-125F2;0.755636!11902-125F3;0.876941!11903-125F4;0.6147!10689-109F5;0.61856!10648-109A9;0.213042!10784-110H1;0.0462887!10744-110C6;0.0189073!10772-110F7;0.56917!10474-106I6;0.40785!10600-108E6;0.903128!10684-109E9;0.106119!12226-129F3;0.221947!12227-129F4;0.692986!10508-107D4;0.0344188!10539-107G8;0.696803!10607-108F4;0.443244!10555-107I6;0.00816772!10774-110F9;0.328674!10637-108I7;0.211888!10663-109C6;0.133567!10728-110A8;0.0952304!10729-110A9;0.0958457!10430-106D7;0.210472!10730-110B1;0.0672285!10813-111B3;0.0132375!10812-111B2;0.0396518!10037-101F1;0.102419!10172-103C1;0.591701!10163-103B1;0.717413!10076-102A4;0.995325!10073-102A1;0.756758!10036-101E9;0.825713!10195-103E6;0.600329!10277-104E7;0.795909!10434-106E2;0.23035!10550-107I1;0.494725!10545-107H5;0.0145668!10544-107H4;0.0636739!10704-109H2;0.393684!10510-107D6;0.732764!10558-107I9;0.0343494!10020-101D2;0.508716!10732-110B3;0.145877!10049-101G4;0.694754!10698-109G5;0.411065!10437-106E5;0.53888!10417-106C3;0.864797!10035-101E8;0.0134599!10171-103B9;0.654856!10157-103A4;0.277891!10034-101E7;0.798515!10072-101I9;0.602057!10199-103F1;0.893385!10200-103F2;0.404135!10697-109G4;0.211423!10723-110A3;0.168772!10179-103C8;0.137539!10160-103A7;0.990595!10180-103C9;0.749733!10162-103A9;0.262791!10021-101D3;0.394418!10840-111E3;0.260017!10706-109H4;0.103845!10033-101E6;0.999147!10032-101E5;0.841239!10490-107B4;0.670028!10439-106E7;0.0332576!10022-101D4;0.7207!10176-103C5;0.24598!10469-106I1;0.48357!10067-101I4;0.112596!10411-106B6;0.741816!10471-106I3;0.306472!10030-101E3;0.0624079!10475-106I7;0.333473!10787-110H4;0.893886!10477-106I9;0.412396!10695-109G2;0.592368!11771-123I7;0.0957942!11772-123I8;0.565393!11773-123I9;0.148156!10093-102C3;0.327449!10442-106F1;0.786451!10442-106F1;0.190777!10201-103F3;0.27935!10639-108I9;0.947269!11843-124H7;0.0308444!11841-124H5;0.301054!10693-109F9;0.039767!10436-106E4;0.0574512!10483-107A6;0.017301!10282-104F3;0.0227748!10023-101D5;0.477346!10066-101I3;0.345509!10065-101I2;0.30241!10800-110I8;0.124369!10610-108F7;0.0177014!10841-111E4;0.124786!10541-107H1;0.626874!10842-111E5;0.0889112!10562-108A4;0.607321!10024-101D6;9.55518e-05!10064-101I1;0.844662!10609-108F6;0.586706!10048-101G3;0.00416428!10781-110G7;0.234076!10181-103D1;0.000720573!10159-103A6;0.361182!10056-101H2;0.527333!10737-110B8;0.303248!10025-101D7;0.215479!10044-101F8;0.0467809!10424-106D1;0.0361868!10463-106H4;0.40958!10616-108G4;0.00197654!10486-107A9;0.198336!10062-101H8;0.164173!10202-103F4;0.479416!10158-103A5;0.403725!10441-106E9;0.340648!10031-101E4;0.438705!10063-101H9;0.740842!10063-101H9;0.897998!11763-123H8;0.508538!11765-123I1;0.0951546!11768-123I4;0.190559!10807-111A6;0.085447!10790-110H7;0.118219!10798-110I6;0.363787!10786-110H3;0.709641!10591-108D6;0.277313!10593-108D8;0.11627!10590-108D5;0.264194!10026-101D8;0.222462!10096-102C6;0.15409!10168-103B6;0.617737!10154-103A1;0.681133!10209-103G2;0.892955!10061-101H7;0.219635!10027-101D9;0.444358!10043-101F7;0.839723!10783-110G9;0.570661!10028-101E1;0.532503!10060-101H6;0.501666!10203-103F5;0.882621!10059-101H5;0.145808!10047-101G2;0.340674!10029-101E2;0.433781!10058-101H4;0.281941!10418-106C4;0.26356!10492-107B6;0.08543!10694-109G1;0.0748402!10797-110I5;0.581022!10057-101H3;0.0059835!10100-102D1;0.151453!10055-101H1;0.636772!10204-103F6;0.331946!10191-103E2;0.162678!10563-108A5;0.28692
|name=CNhs12625_bu_f2
|name=CNhs12625_bu_f2
|tomtom_result=Hand1::Tcfe2a#MA0092.1;-1;0.00323871;1.54163;1;10;AAATCTGTATT;GGTCTGGCAT;+!RLM1#MA0369.1;0;0.00939476;4.4719;1;11;AAATCTGTATT;GAATCTATTTATAGAACT;-!FOXL1#MA0033.1;-3;0.00989646;4.71071;1;8;AAATCTGTATT;TATGTATA;-!FOXI1#MA0042.1;0;0.0101156;4.81501;1;11;AAATCTGTATT;GGATGTTTGTTT;+!Pax4#MA0068.1;12;0.0159524;7.59334;1;11;AAATCTGTATT;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-!Foxq1#MA0040.1;0;0.019948;9.49524;1;11;AAATCTGTATT;TATTGTTTATT;+
}}
}}

Latest revision as of 12:18, 7 September 2012

Full Name: CNhs12625_bu_f2

Motif matrix
POACGT
1215.3036747259334671.88748467699261123.2360608599994129.57277973707448
2219.2614126481097797.16479031882145199.337447688773124.236349344295697
3248.0019415886109293.98911749764127120.8582350706949577.15070584305276
413.30562052908081833.1902199967512926.062703508411957467.441455965756
521.608511578367548269.4515866491463234.7199133341552814.219988438330974
63.91068503091006653.89477010186651649.491590585709602522.7029542815136
736.7128562647302210.092100004587993480.129012193962313.066031536719372
832.1206914605395512.262756274667186149.25127946937886346.3652727954145
9278.363140445643132.87233165506839179.925915268826248.83861263046207
10170.37328151587184142.0887777790199548.977548437158404178.56039226794985
11210.998549828098756.1245403225532233.83157981585925239.04533003348888

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Hand1::Tcfe2a#MA0092.1-10.003238711.54163110AAATCTGTATTGGTCTGGCAT+
RLM1#MA0369.100.009394764.4719111AAATCTGTATTGAATCTATTTATAGAACT-
FOXL1#MA0033.1-30.009896464.7107118AAATCTGTATTTATGTATA-
FOXI1#MA0042.100.01011564.81501111AAATCTGTATTGGATGTTTGTTT+
Pax4#MA0068.1120.01595247.59334111AAATCTGTATTGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
Foxq1#MA0040.100.0199489.49524111AAATCTGTATTTATTGTTTATT+
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