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MacroAPE 1083:MYBB f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;1.4210526315789451;0.4736842105263156;1.4210526315789451;5.684210526315789!2;3.0789473684210553;1.894736842105266;4.0263157894736885;0.0!3;1...")
 
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249!10464-106H5;0.077748!10827-111C8;0.122926!10789-110H6;0.885856!10828-111C9;0.554353!10788-110H5;0.0422656!10792-110H9;0.0843205!10765-110E9;0.103136!10829-111D1;0.230729!10830-111D2;0.150344!10831-111D3;0.0287397!10832-111D4;0.0343397!10833-111D5;0.0069091!10764-110E8;0.0451089!10770-110F5;0.013993!10399-106A3;0.111878!10400-106A4;0.0554104!10405-106A9;0.0796317!10834-111D6;0.048558!10835-111D7;0.0593956!10836-111D8;0.204596!10837-111D9;0.0922356!10699-109G6;0.105569!10802-111A1;0.0886107!10796-110I4;0.276028!10010-101C1;0.178788!10810-111A9;0.598141!10421-106C7;0.910693!10708-109H6;0.456083!12235-129G3;0.91451!12236-129G4;0.228586!12237-129G5;0.259481!10167-103B5;0.300351!10151-102I7;0.9836!10428-106D5;0.888468!10795-110I3;0.645796!10805-111A4;0.228344!10052-101G7;0.844651!10189-103D9;0.610412!10589-108D4;0.895191!10425-106D2;0.252411!10427-106D4;0.31569!10702-109G9;0.103189!10432-106D9;0.6116!10496-107C1;0.80868!10718-109I7;0.101108!10011-101C2;0.202707!10053-101G8;0.727115!10686-109F2;0.227238!10084-102B3;0.937088!10012-101C3;0.729728!10085-102B4;0.86422!10482-107A5;0.666514!10419-106C5;0.569158!10080-102A8;0.779892!10760-110E4;0.730836!10709-109H7;0.07352!10710-109H8;0.0619991!10703-109H1;0.274654!10719-109I8;0.212259!10642-109A3;0.259491!10177-103C6;0.0198963!10164-103B2;0.862979!10173-103C2;0.896242!10166-103B4;0.934723!10083-102B2;0.867562!10188-103D8;0.720238!10552-107I3;0.879815!10553-107I4;0.521634!10013-101C4;0.433837!10536-107G5;0.693688!10618-108G6;0.623962!10423-106C9;0.340395!10785-110H2;0.394906!12238-129G6;0.981315!12239-129G7;0.0965209!12240-129G8;0.252796!10416-106C2;0.187364!10801-110I9;0.0572017!10766-110F1;0.377235!10824-111C5;0.227655!10825-111C6;0.0621579!10826-111C7;0.0642311!10454-106G4;0.0628532!10409-106B4;0.0406781!10638-108I8;0.0489153!10636-108I6;0.22225!10513-107D9;0.698525!10420-106C6;0.352875!10082-102B1;0.0183098!10014-101C5;0.800639!10070-101I7;0.769305!10452-106G2;0.869632!10453-106G3;0.343181!10449-106F8;0.124938!10042-101F6;0.0997093!10069-101I6;0.561133!10193-103E4;0.523136!10631-108I1;0.947875!10438-106E6;0.00980343!10488-107B2;0.582191!10196-103E7;0.681607!10071-101I8;0.953255!10071-101I8;0.735925!10041-101F5;0.834332!10451-106G1;0.517046!10450-106F9;0.698118!10604-108F1;0.414189!10605-108F2;0.749651!10606-108F3;0.68149!10603-108E9;0.888105!10497-107C2;0.892859!10448-106F7;0.719956!10643-109A4;0.824488!10426-106D3;0.367838!10431-106D8;0.786663!10197-103E8;0.771722!10443-106F2;0.735185!10815-111B5;0.479459!10816-111B6;0.340149!10817-111B7;0.372231!10015-101C6;0.359257!10410-106B5;0.552904!10054-101G9;0.714109!10758-110E2;0.401879!10711-109H9;0.954344!10040-101F4;0.875032!10470-106I2;0.893633!10415-106C1;0.611456!10198-103E9;0.0422413!10614-108G2;0.707851!10612-108F9;0.343136!10549-107H9;0.54678!10615-108G3;0.805035!10487-107B1;0.499603!10433-106E1;0.157554!10688-109F4;0.672985!10444-106F3;0.966868!10444-106F3;0.783666!10485-107A8;0.702895!10413-106B8;0.974903!10175-103C4;0.654397!10161-103A8;0.843144!12131-128D7;0.696089!10624-108H3;0.058355!10712-109I1;0.366302!10205-103F7;0.171891!10206-103F8;0.667113!10207-103F9;0.731444!10050-101G5;0.152239!10051-101G6;0.221937!10016-101C7;0.406611!10046-101G1;0.682757!10778-110G4;0.321066!10633-108I3;0.037192!10818-111B8;0.567198!10819-111B9;0.960726!10820-111C1;0.993296!10484-107A7;0.994373!10808-111A7;0.213052!10169-103B7;0.0257405!10153-102I9;0.882163!13425-144D5;0.847746!13433-144E4;0.313754!13437-144E8;0.303645!11904-125F5;0.210529!11905-125F6;0.680708!10039-101F3;0.978381!10791-110H8;0.77004!10017-101C8;0.639768!10045-101F9;0.375786!10509-107D5;0.414879!10839-111E2;0.579513!10692-109F8;0.469248!10079-102A7;0.461233!10078-102A6;0.470598!10721-110A1;0.720656!10569-108B2;0.35809!10570-108B3;0.716266!10571-108B4;0.766003!10647-109A8;0.968899!10752-110D5;0.751033!10782-110G8;0.0046928!10726-110A6;0.899026!10018-101C9;0.563959!10086-102B5;0.264328!10182-103D2;0.0910505!10165-103B3;0.499452!10499-107C4;0.614865!10408-106B3;0.144968!10019-101D1;0.955674!10068-101I5;0.602902!10075-102A3;0.732499!10077-102A5;0.565446!10727-110A7;0.376761!10775-110G1;0.0928467!10412-106B7;0.135563!12231-129F8;0.418707!12232-129F9;0.846938!12233-129G1;0.914042!12234-129G2;0.828544!10414-106B9;0.3539!10170-103B8;0.641237!10183-103D3;0.868934!10150-102I6;0.875615!10174-103C3;0.871548!10155-103A2;0.720806!10038-101F2;0.623335!10838-111E1;0.472085!10759-110E3;0.897472!10514-107E1;0.622692!10465-106H6;0.984512!10691-109F7;0.697687!10843-111E6;0.26898!10844-111E7;0.0501908!11747-123G1;0.559611!11748-123G2;0.894538!11749-123G3;0.381385!11750-123G4;0.776485!11751-123G5;0.512983!11840-124H4;0.696606!11752-123G6;0.853454!11753-123G7;0.963898!11754-123G8;0.895334!11755-123G9;0.488513!11756-123H1;0.495624!11833-124G6;0.231397!11760-123H5;0.209122!11836-124G9;0.247531!11758-123H3;0.611982!11835-124G8;0.148325!11762-123H7;0.184864!11838-124H2;0.870685!11757-123H2;0.824617!11759-123H4;0.88608!11761-123H6;0.128643!11842-124H6;0.664618!11837-124H1;0.198012!10568-108B1;0.246447!13230-141I8;0.673588!13231-141I9;0.758795!10696-109G3;0.897355!10493-107B7;0.258211!10494-107B8;0.541856!10850-111F4;0.328654!10851-111F5;0.861354!10852-111F6;0.552737!10853-111F7;0.869945!10854-111F8;0.991523!10855-111F9;0.98053!10856-111G1;0.199677!10847-111F1;0.999109!10846-111E9;0.594742!10848-111F2;0.86044!10845-111E8;0.325827!10857-111G2;0.0549096!10858-111G3;0.706595!10156-103A3;0.560062!11901-125F2;0.7844!11902-125F3;0.32793!11903-125F4;0.856975!10689-109F5;0.276687!10648-109A9;0.903588!10784-110H1;0.364812!10744-110C6;0.387627!10772-110F7;0.324769!10474-106I6;0.00249445!10600-108E6;0.0580484!10684-109E9;0.984406!12226-129F3;0.328528!12227-129F4;0.822511!10508-107D4;0.887713!10539-107G8;0.790436!10607-108F4;0.809427!10555-107I6;0.98984!10774-110F9;0.668255!10637-108I7;0.958968!10663-109C6;0.689876!10728-110A8;0.929031!10729-110A9;0.756046!10430-106D7;0.179152!10730-110B1;0.0856822!10813-111B3;0.304884!10812-111B2;0.347795!10037-101F1;0.408749!10172-103C1;0.828856!10163-103B1;0.924929!10076-102A4;0.675091!10073-102A1;0.915181!10036-101E9;0.87974!10195-103E6;0.658579!10277-104E7;0.993488!10434-106E2;0.229957!10550-107I1;0.261815!10545-107H5;0.10835!10544-107H4;0.929149!10704-109H2;0.387785!10510-107D6;0.355468!10558-107I9;0.317989!10020-101D2;0.525196!10732-110B3;0.694576!10049-101G4;0.750204!10698-109G5;0.691208!10437-106E5;0.675079!10417-106C3;0.987195!10035-101E8;0.647686!10171-103B9;0.815976!10157-103A4;0.975795!10034-101E7;0.906465!10072-101I9;0.718447!10199-103F1;0.846036!10200-103F2;0.76012!10697-109G4;0.65323!10723-110A3;0.958803!10179-103C8;0.351643!10160-103A7;0.269368!10180-103C9;0.530743!10162-103A9;0.800605!10021-101D3;0.894852!10840-111E3;0.187648!10706-109H4;0.14609!10033-101E6;0.772009!10032-101E5;0.549561!10490-107B4;0.748714!10439-106E7;0.138519!10022-101D4;0.27538!10176-103C5;0.48274!10469-106I1;0.830692!10067-101I4;0.789629!10411-106B6;0.78931!10471-106I3;0.0200185!10030-101E3;0.701827!10475-106I7;0.23188!10787-110H4;0.478523!10477-106I9;0.997231!10695-109G2;0.462595!11771-123I7;0.357534!11772-123I8;0.428746!11773-123I9;0.471443!10093-102C3;0.131496!10442-106F1;0.659267!10442-106F1;0.667018!10201-103F3;0.70368!10639-108I9;0.683057!11843-124H7;0.743298!11841-124H5;0.545396!10693-109F9;0.489618!10436-106E4;0.362129!10483-107A6;0.771477!10282-104F3;0.457035!10023-101D5;0.976806!10066-101I3;0.541087!10065-101I2;0.115576!10800-110I8;0.632599!10610-108F7;0.856654!10841-111E4;0.466813!10541-107H1;0.60016!10842-111E5;0.019464!10562-108A4;0.529142!10024-101D6;0.950179!10064-101I1;0.925926!10609-108F6;0.855537!10048-101G3;0.386845!10781-110G7;0.778381!10181-103D1;0.976884!10159-103A6;0.913928!10056-101H2;0.896447!10737-110B8;0.540905!10025-101D7;0.244188!10044-101F8;0.44463!10424-106D1;0.43133!10463-106H4;0.0293736!10616-108G4;0.295665!10486-107A9;0.511234!10062-101H8;0.624251!10202-103F4;0.530069!10158-103A5;0.920657!10441-106E9;0.829889!10031-101E4;0.580601!10063-101H9;0.613686!10063-101H9;0.880755!11763-123H8;0.859482!11765-123I1;0.778601!11768-123I4;0.930519!10807-111A6;0.982975!10790-110H7;0.523314!10798-110I6;0.288141!10786-110H3;0.829798!10591-108D6;0.479274!10593-108D8;0.38235!10590-108D5;0.557507!10026-101D8;0.38346!10096-102C6;0.443456!10168-103B6;0.292381!10154-103A1;0.841761!10209-103G2;0.751782!10061-101H7;0.436936!10027-101D9;0.584593!10043-101F7;0.326605!10783-110G9;0.955339!10028-101E1;0.490621!10060-101H6;0.574427!10203-103F5;0.644184!10059-101H5;0.896829!10047-101G2;0.444343!10029-101E2;0.282919!10058-101H4;0.398344!10418-106C4;0.732112!10492-107B6;0.911275!10694-109G1;0.249718!10797-110I5;0.176261!10057-101H3;0.0544161!10100-102D1;0.365862!10055-101H1;0.941665!10204-103F6;0.902806!10191-103E2;0.880751!10563-108A5;0.758754
|name=MYBB_f1
|name=MYBB_f1
|tomtom_result=Myb#MA0100.1;-1;0.00454264;2.1623;1;8;TGCAGGTTGA;GGCCGTTG;+!HAP4#MA0315.1;0;0.00913634;4.3489;1;10;TGCAGGTTGA;TCGCCTCTGATTGGT;-!BRCA1#MA0133.1;-3;0.0119449;5.68576;1;7;TGCAGGTTGA;GTGTTGT;-!myb.Ph3#MA0054.1;0;0.0119734;5.69935;1;9;TGCAGGTTGA;AAACGGTTA;-!Gamyb#MA0034.1;-1;0.0124201;5.91195;1;9;TGCAGGTTGA;GGCGGTTGTC;-
}}
}}

Latest revision as of 12:20, 7 September 2012

Full Name: MYBB_f1

Motif matrix
POACGT
11.42105263157894510.47368421052631561.42105263157894515.684210526315789
23.07894736842105531.8947368421052664.02631578947368850.0
31.1842105263157894.7368421052631563.07894736842105530.0
45.6842105263157893.31578947368421060.00.0
51.8947368421052661.1842105263157894.02631578947368851.894736842105266
60.00.08.0526315789473680.947368421052633
70.9473684210526330.00.9473684210526337.105263157894734
80.00.00.09.0
92.8421052631578990.9473684210526334.02631578947368851.184210526315789
104.7368421052631560.01.1842105263157893.0789473684210553

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Myb#MA0100.1-10.004542642.162318TGCAGGTTGAGGCCGTTG+
HAP4#MA0315.100.009136344.3489110TGCAGGTTGATCGCCTCTGATTGGT-
BRCA1#MA0133.1-30.01194495.6857617TGCAGGTTGAGTGTTGT-
myb.Ph3#MA0054.100.01197345.6993519TGCAGGTTGAAAACGGTTA-
Gamyb#MA0034.1-10.01242015.9119519TGCAGGTTGAGGCGGTTGTC-
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