FF:430-45I2: Difference between revisions

Latest revision as of 19:16, 4 June 2020

Name:	thymus, embryo E15
Species:	Mouse (Mus musculus)
Library ID:	CNhs11005
Sample type:	developmental
Genomic View:	UCSC
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	C57BL/6J
tissue	thymus
dev stage	15 days embryo
sex	mixture
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005419

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11005		CAGE		DRX009114		DRR009988

Accession ID Mm9

Library id		BAM		CTSS
CNhs11005		DRZ001413		DRZ002796

Accession ID Mm10

Library id		BAM		CTSS
CNhs11005		DRZ012763		DRZ014146

Download raw sequence, BAM & CTSS

Mm9

Fasta	BAM	CTSS
download	download	donwload

Mm10

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

CNhs11005

0	0
1	0
10	0
100	0
1000	-0.0142
1001	0
1002	0.189
1003	-0.0125
1004	0
1005	0
1006	-0.145
1007	0.0533
1008	0
1009	-0.0572
101	0.163
1010	0
1011	0.0706
1012	0.111
1013	-0.169
1014	0.284
1015	0.074
1016	-0.0682
1017	0
1018	0.46
1019	0
102	0
1020	0
1021	0.0395
1022	-0.143
1023	0
1024	0.0212
1025	0.0745
1026	0
1027	0.0425
1028	0
1029	0.0324
103	0.159
1030	0
1031	-9.683218e-5
1032	-0.141
1033	0
1034	0.0425
1035	0
1036	0.311
1037	0
1038	-0.216
1039	-0.0565
104	0
1040	-0.0397
1041	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11005

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0119
MA0003.1	MA0003.1	0.936
MA0004.1	MA0004.1	0.681
MA0006.1	MA0006.1	0.916
MA0007.1	MA0007.1	0.43
MA0009.1	MA0009.1	0.971
MA0014.1	MA0014.1	0.526
MA0017.1	MA0017.1	0.00124
MA0018.2	MA0018.2	6.66521e-7
MA0019.1	MA0019.1	0.782
MA0024.1	MA0024.1	1.19813e-9
MA0025.1	MA0025.1	1.35368e-4
MA0027.1	MA0027.1	0.161
MA0028.1	MA0028.1	4.49841e-5
MA0029.1	MA0029.1	0.85
MA0030.1	MA0030.1	0.0173
MA0031.1	MA0031.1	0.00534
MA0035.2	MA0035.2	0.182
MA0038.1	MA0038.1	0.997
MA0039.2	MA0039.2	0.598
MA0040.1	MA0040.1	0.392
MA0041.1	MA0041.1	0.0601
MA0042.1	MA0042.1	0.289
MA0043.1	MA0043.1	0.00957
MA0046.1	MA0046.1	1.28915e-23
MA0047.2	MA0047.2	0.00983
MA0048.1	MA0048.1	0.0801
MA0050.1	MA0050.1	1.05613e-4
MA0051.1	MA0051.1	0.00404
MA0052.1	MA0052.1	5.08832e-7
MA0055.1	MA0055.1	0.0384
MA0057.1	MA0057.1	0.605
MA0058.1	MA0058.1	0.775
MA0059.1	MA0059.1	0.00732
MA0060.1	MA0060.1	0.00218
MA0061.1	MA0061.1	1.79787e-6
MA0062.2	MA0062.2	1.22171e-10
MA0065.2	MA0065.2	0.15
MA0066.1	MA0066.1	0.259
MA0067.1	MA0067.1	0.0658
MA0068.1	MA0068.1	0.377
MA0069.1	MA0069.1	0.499
MA0070.1	MA0070.1	0.784
MA0071.1	MA0071.1	0.0056
MA0072.1	MA0072.1	0.0544
MA0073.1	MA0073.1	0.729
MA0074.1	MA0074.1	0.949
MA0076.1	MA0076.1	3.89133e-5
MA0077.1	MA0077.1	0.144
MA0078.1	MA0078.1	0.393
MA0079.2	MA0079.2	0.169
MA0080.2	MA0080.2	7.86969e-12
MA0081.1	MA0081.1	0.0088
MA0083.1	MA0083.1	0.0574
MA0084.1	MA0084.1	0.853
MA0087.1	MA0087.1	0.602
MA0088.1	MA0088.1	0.0377
MA0090.1	MA0090.1	0.127
MA0091.1	MA0091.1	0.0927
MA0092.1	MA0092.1	0.878
MA0093.1	MA0093.1	0.731
MA0099.2	MA0099.2	0.0342
MA0100.1	MA0100.1	0.414
MA0101.1	MA0101.1	8.16913e-7
MA0102.2	MA0102.2	0.17
MA0103.1	MA0103.1	0.0359
MA0104.2	MA0104.2	0.0424
MA0105.1	MA0105.1	1.11311e-7
MA0106.1	MA0106.1	0.177
MA0107.1	MA0107.1	2.33638e-7
MA0108.2	MA0108.2	0.0341
MA0111.1	MA0111.1	0.789
MA0112.2	MA0112.2	0.0938
MA0113.1	MA0113.1	0.657
MA0114.1	MA0114.1	2.19525e-4
MA0115.1	MA0115.1	0.0997
MA0116.1	MA0116.1	0.00122
MA0117.1	MA0117.1	0.176
MA0119.1	MA0119.1	0.844
MA0122.1	MA0122.1	0.873
MA0124.1	MA0124.1	0.576
MA0125.1	MA0125.1	0.543
MA0131.1	MA0131.1	0.0764
MA0135.1	MA0135.1	0.266
MA0136.1	MA0136.1	5.50819e-15
MA0137.2	MA0137.2	0.0114
MA0138.2	MA0138.2	2.33684e-6
MA0139.1	MA0139.1	0.0501
MA0140.1	MA0140.1	0.344
MA0141.1	MA0141.1	0.00294
MA0142.1	MA0142.1	0.578
MA0143.1	MA0143.1	0.669
MA0144.1	MA0144.1	0.262
MA0145.1	MA0145.1	0.551
MA0146.1	MA0146.1	0.472
MA0147.1	MA0147.1	0.00556
MA0148.1	MA0148.1	0.0164
MA0149.1	MA0149.1	0.566
MA0150.1	MA0150.1	0.00957
MA0152.1	MA0152.1	0.612
MA0153.1	MA0153.1	5.7686e-8
MA0154.1	MA0154.1	0.0231
MA0155.1	MA0155.1	0.373
MA0156.1	MA0156.1	9.99895e-19
MA0157.1	MA0157.1	0.0539
MA0159.1	MA0159.1	0.699
MA0160.1	MA0160.1	0.00138
MA0162.1	MA0162.1	0.113
MA0163.1	MA0163.1	1.6284e-4
MA0164.1	MA0164.1	0.848
MA0258.1	MA0258.1	0.473
MA0259.1	MA0259.1	0.351

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11005

Novel motif	Logo	P-value
1	1	0.91
10	10	0.0335
100	100	0.967
101	101	0.799
102	102	0.508
103	103	0.339
104	104	0.905
105	105	0.772
106	106	0.553
107	107	0.662
108	108	0.729
109	109	0.149
11	11	0.119
110	110	0.0755
111	111	0.551
112	112	0.271
113	113	0.49
114	114	0.207
115	115	0.881
116	116	0.391
117	117	0.0323
118	118	0.476
119	119	0.925
12	12	0.307
120	120	0.612
121	121	0.926
122	122	0.935
123	123	0.627
124	124	0.931
125	125	0.377
126	126	0.913
127	127	0.959
128	128	0.448
129	129	0.375
13	13	0.0077
130	130	0.197
131	131	0.776
132	132	0.399
133	133	0.177
134	134	0.242
135	135	0.283
136	136	0.787
137	137	0.00282
138	138	0.971
139	139	0.193
14	14	0.174
140	140	0.691
141	141	0.846
142	142	0.73
143	143	0.0896
144	144	0.654
145	145	0.0159
146	146	0.888
147	147	0.201
148	148	0.531
149	149	0.723
15	15	0.687
150	150	0.277
151	151	0.972
152	152	0.583
153	153	0.188
154	154	0.387
155	155	0.381
156	156	1.08945e-5
157	157	0.242
158	158	0.279
159	159	0.872
160	160	0.149
161	161	0.382
162	162	0.264
163	163	0.138
164	164	0.0972
165	165	0.554
166	166	0.691
167	167	0.361
168	168	0.165
169	169	0.344
17	17	0.71
18	18	0.842
19	19	0.716
2	2	0.387
20	20	0.388
21	21	0.0324
22	22	0.915
23	23	0.297
24	24	0.0732
25	25	0.542
26	26	0.00237
27	27	0.463
28	28	0.244
29	29	0.0559
3	3	0.384
30	30	0.335
31	31	0.231
32	32	0.423
33	33	0.88
34	34	0.744
35	35	0.717
36	36	0.457
37	37	0.211
38	38	0.193
39	39	0.939
4	4	0.911
40	40	0.28
41	41	0.344
42	42	0.0686
43	43	0.818
44	44	0.573
45	45	0.902
46	46	0.262
47	47	0.763
48	48	0.415
49	49	0.994
5	5	0.744
50	50	0.0345
51	51	0.82
52	52	0.545
53	53	0.54
54	54	0.111
55	55	0.784
56	56	0.806
57	57	0.436
58	58	0.275
59	59	0.167
6	6	0.271
60	60	0.663
61	61	0.0535
62	62	0.344
63	63	0.736
64	64	0.456
65	65	0.353
66	66	0.945
67	67	0.861
68	68	0.266
69	69	0.89
7	7	0.377
70	70	0.496
71	71	9.95694e-4
72	72	0.303
73	73	0.335
74	74	0.449
75	75	0.129
76	76	0.209
77	77	0.923
78	78	0.409
79	79	0.679
8	8	0.488
80	80	0.277
81	81	0.958
82	82	0.95
83	83	0.942
84	84	0.00566
85	85	0.104
86	86	0.555
87	87	0.368
88	88	0.175
89	89	0.471
9	9	0.752
90	90	0.503
91	91	0.497
92	92	0.213
93	93	0.657
94	94	0.442
95	95	0.327
96	96	0.346
97	97	0.303
98	98	0.412
99	99	0.753

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11005

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0011346 mouse thymus- embryo E15 sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002370 (thymus)
0000479 (tissue)
0004119 (endoderm-derived structure)
0000062 (organ)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000077 (mixed endoderm/mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002368 (endocrine gland)
0004177 (hemopoietic organ)
0005057 (immune organ)
0002530 (gland)
0005058 (hemolymphoid system gland)
0010317 (germ layer / neural crest derived structure)
0000153 (anterior region of body)
0002390 (hematopoietic system)
0000949 (endocrine system)
0002193 (hemolymphoid system)
0002405 (immune system)
0009113 (thymic region)

FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000999 (fetal tissue sample)
0000292 (embryonic day sample - mouse)
0000004 (tissue sample)
0000298 (mouse embryonic day 15 sample)
0011346 (mouse thymus- embryo E15 sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0006603 (presumptive mesoderm)
UBERON:0010316 (germ layer / neural crest)
FF:0000294 (mouse embryonic day 11 sample)

@@ Line 1: / Line 1: @@
 {{f5samples
+|DRA_sample_Accession=CAGE@SAMD00005419
+|accession_numbers=CAGE;DRX009114;DRR009988;DRZ001413;DRZ002796;DRZ012763;DRZ014146
 |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0002370,UBERON:0000479,UBERON:0004119,UBERON:0000062,UBERON:0000475,UBERON:0004120,UBERON:0000077,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002368,UBERON:0004177,UBERON:0005057,UBERON:0002530,UBERON:0005058,UBERON:0010317,UBERON:0000153,UBERON:0002390,UBERON:0000949,UBERON:0002193,UBERON:0002405,UBERON:0009113
 |ancestors_in_cell_lineage_facet=
@@ Line 7: / Line 9: @@
 |created_by=
 |creation_date=
-|datafreeze_phase=1
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr2:147190749..147190769,+!p1@Pax1!2.34!216.10!Pax1;;chr2:147190725..147190747,+!p2@Pax1!1.83!66.97!Pax1;;chr16:25801993..25802014,+!p1@Trp63!1.73!52.28!Trp63;;chr11:52096066..52096081,-!p2@Tcf7!1.72!62.45!Tcf7;;chr12:57796615..57796687,+!p1@Pax9!1.64!42.93!Pax9;;chr19:25746898..25746910,+!p1@Dmrt2!1.63!60.29!Dmrt2;;chr16:92826249..92826325,-!p1@Runx1!1.56!84.94!Runx1;;chr8:125921689..125921725,+!p3@Tcf25!1.54!33.69!Tcf25;;chr12:74147689..74147711,-!p1@Six1!1.45!58.03!Six1;;chr7:51787434..51787448,-!p1@Spib!1.43!36.77!Spib;;chr10:20880698..20880717,-!p3@Myb!1.32!31.02!Myb;;chr17:86087592..86087615,-!p1@Six2!1.32!20.03!Six2;;chr5:108494765..108494786,+!p2@Mtf2!1.29!24.96!Mtf2;;chr3:130815703..130815721,+!p2@Lef1!1.28!21.67!Lef1;;chr11:52096804..52096896,-!p1@Tcf7!1.26!134.65!Tcf7;;chr1:38721792..38721845,-!p1@Aff3!1.25!20.85!Aff3;;chr10:20880731..20880775,-!p2@Myb!1.24!34.31!Myb;;chr10:20880629..20880683,-!p1@Myb!1.22!44.47!Myb;;chr2:147190772..147190783,+!p3@Pax1!1.22!15.41!Pax1;;chr12:109242266..109242295,-!p1@Bcl11b!1.21!126.75!Bcl11b;;chr11:52095821..52095836,-!p3@Tcf7!1.21!15.20!Tcf7;;chr1:52065454..52065495,+!p1@Stat4!1.17!22.90!Stat4;;chr3:130813200..130813252,+!p1@Lef1!1.14!57.21!Lef1;;chr11:11584970..11585030,+!p2@Ikzf1!1.13!18.08!Ikzf1;;chr1:52065508..52065522,+!p2@Stat4!1.13!14.58!Stat4;;chr2:153475178..153475196,+!p1@Dnmt3b!1.12!26.19!Dnmt3b;;chr2:9800207..9800234,-!p1@Gata3!1.11!36.57!Gata3;;chr3:130813736..130813752,+!p3@Lef1!1.07!15.20!Lef1;;chr12:3891810..3891829,+!p2@Dnmt3a!1.00!14.28!Dnmt3a;;chr6:52114821..52114828,-!p1@Hoxa2!0.98!12.94!Hoxa2;;chr1:14746065..14746079,-!p1@Msc!0.96!9.96!Msc;;chr11:11590140..11590187,+!p3@Ikzf1!0.93!9.04!Ikzf1;;chr8:125921662..125921675,+!p5@Tcf25!0.92!7.40!Tcf25;;chr1:52065530..52065548,+!p3@Stat4!0.89!6.78!Stat4;;chr3:8666963..8666978,-!p1@Hey1!0.88!44.58!Hey1;;chr11:78200071..78200100,-!p1@Foxn1!0.88!6.57!Foxn1;;chr15:61816932..61816952,+!p2@Myc!0.87!56.29!Myc;;chr15:103170516..103170531,-!p2@Zfp385a!0.87!15.71!Zfp385a;;chr11:121380594..121380609,-!p2@Zfp750!0.87!11.50!Zfp750;;chr13:117099847..117099907,-!p1@Isl1!0.86!12.02!Isl1;;chr4:134676555..134676575,+!p2@Runx3!0.86!6.27!Runx3;;chr8:125921676..125921687,+!p6@Tcf25!0.86!6.27!Tcf25;;chr11:3191741..3191769,+!p5@Patz1!0.84!7.81!Patz1;;chr14:79915425..79915501,+!p1@Elf1!0.82!53.72!Elf1;;chr4:134708451..134708469,+!p1@Runx3!0.82!10.37!Runx3;;chr12:109241728..109241781,-!p2@Bcl11b!0.82!5.96!Bcl11b;;chr17:48025139..48025166,-!p8@Foxp4!0.80!6.37!Foxp4;;chr1:93309740..93309811,-!p1@Hes6!0.79!112.26!Hes6;;chr7:6649134..6649167,-!p1@Zim1!0.79!30.09!Zim1;;chr4:63064364..63064384,-!p1@Akna!0.79!16.13!Akna;;chr3:135257370..135257389,-!p9@Nfkb1!0.79!5.14!Nfkb1;;chr11:11590117..11590138,+!p4@Ikzf1!0.78!5.03!Ikzf1;;chr10:86956396..86956411,-!p1@Ascl1!0.77!7.81!Ascl1;;chr8:59799772..59799789,+!p1@Hand2!0.76!14.69!Hand2;;chr11:11586218..11586285,+!p1@Ikzf1!0.75!16.13!Ikzf1;;chr17:51971960..51971979,-!p1@Satb1!0.75!6.47!Satb1;;chr11:74981654..74981658,-!p1@Hic1!0.74!19.41!Hic1;;chr5:108155007..108155034,-!p1@Gfi1!0.74!4.52!Gfi1;;chr12:57792498..57792515,+!p2@Pax9!0.74!4.52!Pax9;;chr10:77506405..77506441,-!p1@Aire!0.72!4.21!Aire;;chr12:109241852..109241873,-!p4@Bcl11b!0.71!5.03!Bcl11b;;chr16:92697354..92697362,-!p3@Runx1!0.69!6.37!Runx1;;chr10:12810631..12810649,+!p1@Plagl1!0.68!113.19!Plagl1;;chr3:135271185..135271254,-!p4@Nfkb1!0.68!7.50!Nfkb1;;chr11:53583544..53583559,+!p1@Irf1!0.67!70.97!Irf1;;chr19:46380235..46380277,+!p3@Nfkb2!0.67!8.63!Nfkb2;;chr17:51971932..51971958,-!p2@Satb1!0.67!5.34!Satb1;;chr1:69732354..69732402,-!p1@Ikzf2!0.67!4.21!Ikzf2;;chr5:108494686..108494701,+!p3@Mtf2!0.66!5.34!Mtf2;;chr11:11585912..11585950,+!p6@Ikzf1!0.66!4.72!Ikzf1;;chr7:147129712..147129774,+!p1@Utf1!0.66!3.59!Utf1;;chr3:135257325..135257364,-!p11@Nfkb1!0.66!3.59!Nfkb1;;chr1:52176315..52176343,+!p1@Stat1!0.65!58.03!Stat1;;chr8:87225329..87225396,+!p1@Lyl1!0.65!15.00!Lyl1;;chr3:8666997..8667012,-!p2@Hey1!0.65!8.83!Hey1;;chr2:153475210..153475252,+!p2@Dnmt3b!0.64!10.58!Dnmt3b;;chr17:45692676..45692695,+!p2@Nfkbie!0.64!7.50!Nfkbie;;chr12:3891753..3891801,+!p4@Dnmt3a!0.64!5.85!Dnmt3a;;chr17:45692642..45692663,+!p1@Nfkbie!0.62!11.71!Nfkbie;;chr11:100721761..100721851,+!p1@Stat5a!0.61!26.60!Stat5a;;chr16:14705961..14705978,+!p2@Snai2!0.61!17.05!Snai2;;chr10:119913278..119913298,-!p2@Hmga2!0.61!7.81!Hmga2;;chr10:119913310..119913366,-!p1@Hmga2!0.60!28.04!Hmga2;;chr15:103170533..103170556,-!p1@Zfp385a!0.60!12.94!Zfp385a;;chr12:74147860..74147888,-!p2@Six1!0.60!2.98!Six1;;chr4:46356509..46356527,+!p1@Foxe1!0.60!2.98!Foxe1;;chr10:119913546..119913583,-!p3@Hmga2!0.59!6.88!Hmga2;;chr12:34642510..34642530,+!p1@Twist1!0.58!10.48!Twist1;;chr16:92697560..92697592,-!p2@Runx1!0.57!20.95!Runx1;;chr7:20214704..20214800,-!p1@Relb!0.57!10.48!Relb;;chr11:11585678..11585745,+!p5@Ikzf1!0.57!4.31!Ikzf1;;chr4:6917606..6917681,-!p1@Tox!0.56!13.35!Tox;;chr3:130813557..130813582,+!p5@Lef1!0.56!3.08!Lef1;;chr3:130813756..130813767,+!p8@Lef1!0.56!2.67!Lef1;;chr3:130813254..130813263,+!p4@Lef1!0.56!2.67!Lef1;;chr10:80812991..80813004,-!p3@Hmg20b!0.55!6.06!Hmg20b;;chr11:121380640..121380655,-!p1@Zfp750!0.55!4.72!Zfp750;;chr10:77506352..77506356,-!p2@Aire!0.55!2.57!Aire;;chr2:172375081..172375105,+!p1@Tfap2c!0.55!2.57!Tfap2c;;chr2:173044380..173044432,-!p1@Zbp1!0.54!6.88!Zbp1;;chr11:3190303..3190351,+!p3@Patz1!0.54!5.65!Patz1;;chr11:52096750..52096772,-!p4@Tcf7!0.54!4.21!Tcf7;;chr14:67853632..67853674,+!p3@Ebf2!0.54!3.18!Ebf2;;chr17:51972603..51972624,-!p9@Satb1!0.54!2.47!Satb1;;chr9:20757246..20757278,-!p1@Dnmt1!0.53!88.54!Dnmt1;;chr2:91077034..91077078,-!p2@Ddb2!0.53!6.27!Ddb2;;chr6:28347999..28348023,-!p3@Zfp800!0.53!2.36!Zfp800;;chr7:134169762..134169795,-!p3@Maz!0.52!26.50!Maz;;chr4:149862477..149862553,+!p3@Rere!0.52!10.07!Rere;;chr2:77357622..77357704,-!p1@Zfp385b!0.52!7.40!Zfp385b;;chr6:51382677..51382783,+!p1@Nfe2l3!0.52!7.19!Nfe2l3;;chr8:87225702..87225726,+!p3@Lyl1!0.52!5.44!Lyl1;;chr10:128082840..128082872,-!p1@Ikzf4!0.52!2.98!Ikzf4;;chr13:31898729..31898761,+!p1@Foxc1!0.51!6.68!Foxc1;;chr11:23978111..23978134,+!p3@Bcl11a!0.51!5.44!Bcl11a;;chr4:135129538..135129558,-!p1@Grhl3!0.51!3.80!Grhl3;;chr1:136186574..136186592,+!p1@Myog!0.51!2.26!Myog;;chr9:71743854..71743909,-!p1@Tcf12!0.50!22.49!Tcf12;;chr17:27693622..27693635,+!p11@Hmga1-rs1,p12@Hmga1!0.50!2.88!Hmga1;;chr7:144505980..144506010,-!p3@Ebf3!0.50!2.77!Ebf3;;chr12:50483639..50483654,+!p1@Foxg1!0.50!2.16!Foxg1;;chr16:30065419..30065437,+!p1@Hes1!0.49!149.75!Hes1;;chr8:123260252..123260264,+!p1@Irf8!0.49!19.31!Irf8;;chr2:91077082..91077122,-!p1@Ddb2!0.49!16.95!Ddb2;;chr15:102034446..102034506,+!p2@Zfp740!0.49!9.14!Zfp740;;chr8:87225670..87225697,+!p2@Lyl1!0.49!7.60!Lyl1;;chr12:87027598..87027652,+!p1@Batf!0.49!5.85!Batf;;chr2:115890469..115890485,-!p7@Meis2!0.49!3.80!Meis2;;chr1:165243591..165243625,-!p2@Prrx1!0.49!3.59!Prrx1;;chr15:103085660..103085681,-!p1@Nfe2!0.49!3.49!Nfe2;;chr17:27693558..27693580,+!p1@Hmga1-rs1,p1@Hmga1!0.48!126.33!Hmga1;;chr16:14705925..14705951,+!p1@Snai2!0.48!18.90!Snai2;;chr2:162880387..162880413,+!p1@Mybl2!0.48!16.64!Mybl2;;chr4:3865501..3865548,-!p1@Plag1!0.48!13.46!Plag1;;chr11:23980664..23980706,+!p2@Bcl11a!0.48!11.30!Bcl11a;;chr5:125538905..125538910,-!p4@Ncor2!0.48!2.77!Ncor2;;chr6:30908793..30908815,-!p1@Klf14!0.48!2.05!Klf14;;chr1:87495371..87495397,-!p1@Sp110!0.48!2.05!Sp110;;chr12:74147842..74147856,-!p3@Six1!0.48!2.05!Six1;;chr3:130813586..130813604,+!p7@Lef1!0.48!2.05!Lef1;;chr19:46379199..46379301,+!p1@Nfkb2!0.47!14.89!Nfkb2;;chr18:55150248..55150308,-!p6@Zfp608!0.47!5.75!Zfp608;;chrX:48559079..48559108,-!p2@Mbnl3!0.47!5.55!Mbnl3;;chr5:108494715..108494757,+!p1@Mtf2!0.46!39.54!Mtf2;;chr5:138187341..138187406,+!p3@Tsc22d4!0.46!27.53!Tsc22d4;;chr13:96095150..96095184,+!p2@Zbed3!0.46!17.77!Zbed3;;chr7:17647736..17647772,-!p1@Hif3a!0.46!8.63!Hif3a;;chr15:37162796..37162828,+!p1@Grhl2!0.46!3.70!Grhl2;;chr14:67853425..67853454,+!p1@Ebf2!0.46!2.98!Ebf2;;chr10:119914001..119914078,-!p4@Hmga2!0.46!2.88!Hmga2;;chr15:61817095..61817111,+!p1@Myc!0.45!154.17!Myc;;chr16:4559608..4559681,-!p1@Tfap4!0.45!20.64!Tfap4;;chr15:35225845..35225867,+!p1@Osr2!0.45!5.75!Osr2;;chr7:89137163..89137200,-!p1@Bnc1!0.45!2.36!Bnc1;;chr19:46380399..46380417,+!p4@Nfkb2!0.45!1.85!Nfkb2;;chr16:92826232..92826245,-!p4@Runx1!0.45!1.85!Runx1;;chr7:147129777..147129814,+!p2@Utf1!0.45!1.85!Utf1;;chr18:80904854..80904919,-!p2@Nfatc1!0.44!29.58!Nfatc1;;chr13:30077847..30077906,-!p1@E2f3!0.44!18.90!E2f3;;chr2:173044357..173044377,-!p2@Zbp1!0.44!2.88!Zbp1;;chr11:120624132..120624143,+!p10@Hmga1,p9@Hmga1-rs1!0.44!2.47!Hmga1;;chr3:90046995..90047031,-!p2@Creb3l4!0.44!2.36!Creb3l4;;chr17:51972530..51972571,-!p7@Satb1!0.44!1.75!Satb1;;chr9:55388997..55389016,+!p1@Isl2!0.44!1.75!Isl2;;chr10:20862857..20862868,-!p7@Myb!0.44!1.75!Myb;;chr11:52095797..52095809,-!p5@Tcf7!0.44!1.75!Tcf7;;chr12:100802113..100802127,-!p5@Foxn3!0.43!2.47!Foxn3;;chr6:133985993..133986029,+!p2@Etv6!0.42!15.00!Etv6;;chr12:37835141..37835194,+!p1@Meox2!0.42!6.68!Meox2;;chr2:146047829..146047847,+!p1@Insm1!0.42!3.59!Insm1;;chr13:30841099..30841116,+!p1@Irf4!0.42!2.98!Irf4;;chr15:103085802..103085817,-!p4@Nfe2!0.42!2.26!Nfe2;;chr19:5560600..5560617,-!p1@Ovol1!0.42!2.16!Ovol1;;chr12:87027663..87027678,+!p2@Batf!0.42!1.64!Batf;;chr5:108155037..108155060,-!p2@Gfi1!0.42!1.64!Gfi1;;chr2:147187695..147187702,+!p8@Pax1!0.42!1.64!Pax1;;chr12:109241804..109241823,-!p5@Bcl11b!0.42!1.64!Bcl11b;;chr11:69393894..69393921,+!p1@Trp53!0.41!214.67!Trp53;;chr2:84877369..84877459,+!p1@Ssrp1!0.41!48.89!Ssrp1;;chr4:122911086..122911112,+!p1@Heyl!0.41!26.60!Heyl;;chr2:84877605..84877687,+!p3@Ssrp1!0.41!13.35!Ssrp1;;chr1:165243792..165243808,-!p1@Prrx1!0.41!7.60!Prrx1;;chr7:144506077..144506128,-!p1@Ebf3!0.41!4.72!Ebf3;;chr13:96095124..96095144,+!p3@Zbed3!0.41!3.90!Zbed3;;chr13:31898496..31898519,+!p3@Foxc1!0.41!3.08!Foxc1;;chrX:48559055..48559077,-!p6@Mbnl3!0.41!2.26!Mbnl3;;chr11:60023912..60023930,-!p1@Srebf1!0.40!55.05!Srebf1;;chr11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bd3!0.20!10.89!Mbd3;;chr11:85646303..85646329,+!p1@Tbx2!0.20!8.83!Tbx2;;chr16:17530781..17530882,-!p2@Thap7!0.20!7.70!Thap7;;chr13:21454695..21454752,+!p1@Zscan12!0.20!7.40!Zscan12;;chr10:20032330..20032345,+!p3@Bclaf1!0.20!6.27!Bclaf1;;chr13:67461490..67461531,-!p1@Zfp595,p1@Zfp953!0.20!5.14!Zfp953;;chr12:77470507..77470572,-!p2@Zbtb25!0.20!4.83!Zbtb25;;chr17:45570455..45570479,-!p2@Cdc5l!0.20!4.62!Cdc5l;;chr17:71200558..71200572,-!p4@Tgif1!0.20!2.77!Tgif1;;chr6:128312772..128312792,+!p2@Foxm1!0.20!1.64!Foxm1;;chr2:104966766..104966786,+!p1@Wt1!0.20!1.44!Wt1;;chr2:162880306..162880319,+!p3@Mybl2!0.20!1.23!Mybl2;;chr13:64254437..64254453,-!p4@Zfp367!0.20!1.13!Zfp367;;chr12:9581243..9581254,+!p4@Osr1!0.20!1.13!Osr1;;chr11:69749299..69749319,+!p5@Ybx2!0.20!0.92!Ybx2;;chr1:93698068..93698085,+!p2@Twist2!0.20!0.82!Twist2;;chr8:72663586..72663633,+!p1@2310045N01Rik,p1@Mef2b!0.19!70.25!Mef2b;;chr8:107821563..107821642,+!p1@E2f4!0.19!39.24!E2f4;;chr1:135320989..135321043,-!p1@Sox13!0.19!14.79!Sox13;;chr4:133801494..133801519,-!p2@Zfp593!0.19!9.24!Zfp593;;chr14:52640373..52640412,-!p1@Zfp219!0.19!7.50!Zfp219;;chr10:79390075..79390115,+!p2@Arid3a!0.19!3.90!Arid3a;;chr4:87679193..87679219,-!p5@Mllt3!0.19!3.08!Mllt3;;chr14:76903992..76904056,+!p6@Tsc22d1!0.19!2.05!Tsc22d1;;chr4:87452180..87452196,-!p3@Mllt3!0.19!1.95!Mllt3;;chr8:72498017..72498059,-!p13@Gatad2a!0.19!1.54!Gatad2a;;chr2:120365588..120365602,-!p2@Zfp106!0.19!1.54!Zfp106;;chr5:138188113..138188145,+!p9@Tsc22d4!0.19!1.44!Tsc22d4;;chr17:15636925..15636940,+!p2@Tbp!0.19!1.34!Tbp;;chr8:47825166..47825178,+!p2@Irf2!0.19!1.34!Irf2;;chr15:102865088..102865107,+!p1@Hoxc4!0.19!1.03!Hoxc4;;chr6:52154386..52154407,-!p2@Hoxa5!0.19!0.92!Hoxa5;;chr7:134169357..134169366,-!p18@Maz!0.19!0.82!Maz;;chr6:52167459..52167492,-!p1@Hoxa7!0.19!0.82!Hoxa7;;chr17:37139519..37139531,+!p5@Zfp57!0.19!0.82!Zfp57;;chr2:115890495..115890507,-!p16@Meis2!0.19!0.72!Meis2;;chr6:128312812..128312821,+!p5@Foxm1!0.19!0.72!Foxm1;;chr9:63605740..63605771,-!p1@Smad3!0.18!19.31!Smad3;;chr6:140572167..140572236,+!p2@Aebp2!0.18!13.04!Aebp2;;chr7:28645585..28645659,+!p1@Zfp607!0.18!12.33!Zfp607;;chr8:107694628..107694659,+!p1@Cbfb!0.18!11.61!Cbfb;;chr19:37509324..37509337,+!p1@Hhex!0.18!8.94!Hhex;;chrX:45245679..45245702,-!p1@Smarca1!0.18!5.34!Smarca1;;chr9:48644306..48644364,-!p1@Zbtb16!0.18!4.72!Zbtb16;;chr8:72520139..72520157,-!p6@Gatad2a!0.18!4.62!Gatad2a;;chr6:99216488..99216534,-!p2@Foxp1!0.18!3.08!Foxp1;;chr10:75495410..75495444,+!p2@Zfp280b!0.18!2.67!Zfp280b;;chr5:65213356..65213412,+!p6@Klf3!0.18!2.05!Klf3;;chr4:54960387..54960415,+!p4@Zfp462!0.18!2.05!Zfp462;;chr17:4994491..4994531,+!p6@Arid1b!0.18!1.95!Arid1b;;chr18:60720468..60720472,+!p2@Rbm22!0.18!1.85!Rbm22;;chr11:85646341..85646352,+!p3@Tbx2!0.18!1.85!Tbx2;;chr11:62602947..62602980,-!p2@Zfp286!0.18!1.85!Zfp286;;chr4:133310137..133310152,-!p12@Arid1a!0.18!1.44!Arid1a;;chr4:82151126..82151133,-!p8@Nfib!0.18!0.92!Nfib;;chr17:35031524..35031539,+!p4@Zbtb12!0.18!0.92!Zbtb12;;chr2:162880418..162880429,+!p4@Mybl2!0.18!0.92!Mybl2;;chr3:135354375..135354381,-!p10@Nfkb1!0.18!0.82!Nfkb1;;chr15:102865131..102865151,+!p2@Hoxc4!0.18!0.72!Hoxc4;;chr18:53623836..53623839,+!p1@Prdm6!0.18!0.72!Prdm6;;chr19:25685023..25685043,+!p1@Dmrt3!0.18!0.51!Dmrt3;;chr17:51972400..51972428,-!p11@Satb1!0.18!0.51!Satb1;;chr17:51972017..51972022,-!p17@Satb1!0.18!0.51!Satb1;;chr19:46380374..46380397,+!p7@Nfkb2!0.18!0.51!Nfkb2;;chr4:97248652..97248671,+!p19@Nfia!0.18!0.51!Nfia;;chr2:71384458..71384526,-!p2@Dlx2!0.18!0.51!Dlx2;;chr10:119913974..119913992,-!p9@Hmga2!0.18!0.51!Hmga2;;chr11:34108085..34108092,-!p1@Foxi1!0.18!0.51!Foxi1;;chr11:5420655..5420659,+!p3@Xbp1!0.18!0.51!Xbp1;;chr11:98407234..98407259,-!p2@Ikzf3!0.18!0.51!Ikzf3;;chr11:98407370..98407395,-!p3@Ikzf3!0.18!0.51!Ikzf3;;chr10:13686012..13686028,+!p8@Hivep2!0.18!0.51!Hivep2;;chr10:20881176..20881191,-!p6@Myb!0.18!0.51!Myb;;chr11:23978270..23978290,+!p9@Bcl11a!0.18!0.51!Bcl11a;;chr8:87425854..87425891,+!p1@Klf1!0.18!0.51!Klf1;;chr9:59797525..59797538,-!p2@Nr2e3!0.18!0.51!Nr2e3;;chr9:32349051..32349061,-!p5@Fli1!0.18!0.51!Fli1;;chr13:73397958..73397994,+!p1@Irx4!0.18!0.51!Irx4;;chr12:57636220..57636236,-!p3@Nkx2-1!0.18!0.51!Nkx2-1;;chr12:57636178..57636194,-!p2@Nkx2-1!0.18!0.51!Nkx2-1;;chr15:37163124..37163153,+!p3@Grhl2!0.18!0.51!Grhl2;;chr15:37163041..37163061,+!p5@Grhl2!0.18!0.51!Grhl2;;chr2:104966874..104966907,+!p2@Wt1!0.18!0.51!Wt1;;chr5:77543935..77543947,-!p4@Hopx!0.18!0.51!Hopx;;chr7:147129680..147129693,+!p3@Utf1!0.18!0.51!Utf1;;chr6:140571128..140571148,+!p10@Aebp2!0.18!0.51!Aebp2;;chr6:14851377..14851396,+!p10@Foxp2!0.18!0.51!Foxp2;;chr10:79896360..79896400,-!p1@Tcf3!0.17!54.13!Tcf3;;chr8:26951227..26951266,-!p1@Ash2l!0.17!53.41!Ash2l;;chr2:84877326..84877362,+!p2@Ssrp1!0.17!28.25!Ssrp1;;chr17:28487692..28487765,-!p1@Tead3!0.17!25.88!Tead3;;chr6:128312937..128313076,+!p1@Foxm1!0.17!17.87!Foxm1;;chr7:88005795..88005858,+!p1@Zscan2!0.17!8.83!Zscan2;;chrX:132420399..132420436,+!p1@Bhlhb9!0.17!7.40!Bhlhb9;;chr12:110031227..110031254,+!p3@Yy1!0.17!6.88!Yy1;;chr10:127707562..127707597,+!p2@Stat2!0.17!6.06!Stat2;;chr11:83943060..83943082,-!p2@Tada2a!0.17!5.34!Tada2a;;chr17:34784073..34784118,+!p2@Atf6b!0.17!4.62!Atf6b;;chr4:128483680..128483715,-!p3@Zfp362!0.17!4.11!Zfp362;;chr17:45570488..45570510,-!p3@Cdc5l!0.17!3.90!Cdc5l;;chr4:133310175..133310212,-!p5@Arid1a!0.17!3.49!Arid1a;;chr11:23978078..23978096,+!p4@Bcl11a!0.17!3.29!Bcl11a;;chr7:19679964..19679982,+!p1@Six5!0.17!2.98!Six5;;chr15:100058289..100058300,+!p3@Atf1!0.17!2.77!Atf1;;chr3:30408603..30408668,-!p1@Mecom!0.17!2.26!Mecom;;chr3:90097275..90097302,+!p2@Gatad2b!0.17!2.26!Gatad2b;;chr3:135354903..135354945,-!p7@Nfkb1!0.17!2.26!Nfkb1;;chr5:134790276..134790294,-!p7@Gtf2i!0.17!2.16!Gtf2i;;chr2:153475381..153475419,+!p3@Dnmt3b!0.17!1.95!Dnmt3b;;chr17:37140628..37140631,+!p2@Zfp57!0.17!1.85!Zfp57;;chr2:90936947..90936977,+!p2@Sfpi1!0.17!1.85!Sfpi1;;chr1:120879128..120879183,-!p3@Gli2!0.17!1.75!Gli2;;chr12:9581284..9581303,+!p2@Osr1!0.17!1.75!Osr1;;chr10:119913792..119913820,-!p5@Hmga2!0.17!1.44!Hmga2;;chr15:96118197..96118200,+!p3@Arid2!0.17!1.44!Arid2;;chr2:91864449..91864492,-!p3@Creb3l1!0.17!1.34!Creb3l1;;chr2:151969288..151969294,+!p1@Tcf15!0.17!1.23!Tcf15;;chr7:30638614..30638628,-!p2@Zfp940!0.17!1.23!Zfp940;;chr19:9018049..9018054,+!p5@Mta2!0.17!0.92!Mta2;;chr2:152223852..152223872,-!p7@Sox12!0.17!0.92!Sox12;;chr2:180069370..180069409,-!p1@Gata5!0.17!0.72!Gata5;;chr2:17977331..17977360,+!p11@Mllt10!0.17!0.62!Mllt10;;chr5:134790507..134790546,-!p1@Gtf2i!0.16!31.33!Gtf2i;;chr8:74474953..74475029,+!p1@Zfp961!0.16!20.85!Zfp961;;chr4:82151274..82151290,-!p3@Nfib!0.16!20.64!Nfib;;chr7:24993112..24993158,-!p1@Zfp111!0.16!12.84!Zfp111;;chr12:12948633..12948651,-!p1@Mycn!0.16!11.81!Mycn;;chr1:170362040..170362113,-!p2@Pbx1!0.16!9.65!Pbx1;;chr3:95021853..95021911,-!p1@Gabpb2!0.16!9.35!Gabpb2;;chr4:128483534..128483613,-!p1@Zfp362!0.16!8.42!Zfp362;;chr14:65977498..65977528,+!p1@Zfp395!0.16!8.11!Zfp395;;chr4:120498356..120498401,-!p2@Nfyc!0.16!6.57!Nfyc;;chr4:151401741..151401793,-!p1@Zbtb48!0.16!4.93!Zbtb48;;chr7:29551464..29551487,-!p2@Nfkbib!0.16!4.31!Nfkbib;;chr13:67274092..67274140,+!p1@Rsl1!0.16!3.90!Rsl1;;chr7:30638630..30638702,-!p1@Zfp940!0.16!3.70!Zfp940;;chr18:11052456..11052477,+!p3@Gata6!0.16!3.29!Gata6;;chr6:131338278..131338362,-!p2@Csda!0.16!3.08!Csda;;chr13:67830046..67830082,-!p2@Zfp71-rs1!0.16!2.98!Zfp71-rs1;;chr3:9610074..9610086,-!p2@Zfp704!0.16!2.36!Zfp704;;chr2:31428221..31428244,+!p2@Fubp3!0.16!2.36!Fubp3;;chr17:45570511..45570532,-!p5@Cdc5l!0.16!2.36!Cdc5l;;chr1:170361730..170361769,-!p7@Pbx1!0.16!2.16!Pbx1;;chr1:120950098..120950132,-!p2@Gli2!0.16!2.16!Gli2;;chr12:25257141..25257173,+!p1@Grhl1!0.16!1.85!Grhl1;;chr4:119406412..119406439,+!p2@Hivep3!0.16!1.75!Hivep3;;chr15:40486754..40486771,+!p2@Zfpm2!0.16!1.44!Zfpm2;;chr18:69839537..69839544,+!p13@Tcf4!0.16!1.44!Tcf4;;chr16:50429979..50429997,-!p4@Bbx!0.16!1.23!Bbx;;chr14:79915502..79915514,+!p4@Elf1!0.16!1.13!Elf1;;chr14:17407549..17407575,-!p3@Rarb!0.16!1.13!Rarb;;chr13:29044875..29044928,-!p4@Sox4!0.16!0.92!Sox4;;chr14:56443781..56443800,+!p3@Nfatc4!0.16!0.82!Nfatc4;;chr2:115891680..115891701,-!p12@Meis2!0.16!0.82!Meis2;;chr7:56136349..56136360,-!p5@E2f8!0.16!0.82!E2f8;;chr11:44430877..44430899,+!p6@Ebf1!0.16!0.82!Ebf1;;chr13:31898529..31898542,+!p5@Foxc1!0.16!0.72!Foxc1;;chr15:61819047..61819076,+!p5@Myc!0.16!0.72!Myc;;chr3:99057269..99057306,+!p1@Tbx15!0.16!0.72!Tbx15;;chr5:138188180..138188203,+!p12@Tsc22d4!0.16!0.72!Tsc22d4;;chr5:31262571..31262582,-!p4@Preb!0.16!0.72!Preb;;chr2:77357593..77357606,-!p6@Zfp385b!0.16!0.62!Zfp385b;;chr17:34729193..34729274,+!p1@Pbx2!0.15!60.80!Pbx2;;chr8:13869673..13869740,+!p1@Zfp828!0.15!29.89!Zfp828;;chr17:71200529..71200556,-!p1@Tgif1!0.15!20.13!Tgif1;;chr10:79862175..79862221,-!p1@Mbd3!0.15!17.46!Mbd3;;chr17:48061381..48061399,-!p1@Foxp4!0.15!13.76!Foxp4;;chr6:131338400..131338415,-!p3@Csda!0.15!12.53!Csda;;chr4:97439116..97439202,+!p5@Nfia!0.15!10.58!Nfia;;chr17:37139472..37139514,+!p1@Zfp57!0.15!7.91!Zfp57;;chr16:87699206..87699229,+!p3@Bach1!0.15!6.27!Bach1;;chr8:72663098..72663160,-!p2@LOC100048268,p2@Rfxank!0.15!5.55!Rfxank;;chr5:134790355..134790369,-!p4@Gtf2i!0.15!5.44!Gtf2i;;chr17:23701084..23701128,-!p1@Zfp213!0.15!5.34!Zfp213;;chr9:96159665..96159680,+!p3@Tfdp2!0.15!5.03!Tfdp2;;chr15:75447105..75447159,+!p1@Zfp41!0.15!4.31!Zfp41;;chr9:63605978..63605997,-!p2@Smad3!0.15!4.21!Smad3;;chr7:134170541..134170569,-!p9@Maz!0.15!4.11!Maz;;chr16:84835315..84835342,+!p3@Gabpa!0.15!3.80!Gabpa;;chr1:133904217..133904250,+!p5@Elk4!0.15!3.39!Elk4;;chr2:128769696..128769712,-!p2@Zc3h8!0.15!3.29!Zc3h8;;chr2:115891454..115891471,-!p3@Meis2!0.15!3.08!Meis2;;chr6:48552000..48552042,+!p@chr6:48552000..48552042,+!0.15!2.98!Zfp775;;chr17:48061631..48061648,-!p7@Foxp4!0.15!2.67!Foxp4;;chr10:41995430..41995458,-!p3@Foxo3!0.15!2.57!Foxo3;;chr7:135020412..135020433,+!p2@Zfp646!0.15!2.36!Zfp646;;chr5:134790326..134790343,-!p8@Gtf2i!0.15!2.26!Gtf2i;;chr1: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@@ Line 41: / Line 44: @@
 |is_a=EFO:0002091;;FF:0011346
 |is_obsolete=
+|library_id=CNhs11005
+|library_id_phase_based=2:CNhs11005
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;430
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;430
+|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/thymus%252c%2520embryo%2520E15.CNhs11005.430-45I2.mm10.nobarcode.bam
+|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/thymus%252c%2520embryo%2520E15.CNhs11005.430-45I2.mm10.nobarcode.ctss.bed.gz
+|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/thymus%252c%2520embryo%2520E15.CNhs11005.430-45I2.mm9.nobarcode.bam
+|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/thymus%252c%2520embryo%2520E15.CNhs11005.430-45I2.mm9.ctss.bed.gz
+|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/thymus%252c%2520embryo%2520E15.CNhs11005.430-45I2.mm9.nobarcode.rdna.fa.gz
 |name=thymus, embryo E15
 |namespace=FANTOM5
@@ Line 46: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs11005,LSID730,release008,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
 |repeat_enrich_byfamily=0.12465450111183,0,0,0,0.328343008776756,0.0365636126740742,0.0345699256548576,0,0.0206035970846208,0,0,0.6410708842418,0,0,0,0,0,0,0.195132049258405,0,0.321205626364949,0,0,0,0,0,0,0,0,0,0,0,0.222098791914974,0,0,0,0,0,0.0884463586186379,-0.0648347362425501,-0.110914033815991,0.416103373298254,0.282528689631527,0,0,0,0,0,0,0,0,0,0,0.0424616899933645,0,0.015133535027165,0,0,0,0,0.0668080674927324,0,0.058325929496453,0,0.0424616899933645,0.00143261946095022,0.102846227820255,0.0381469352335366,0.311952949321758,0.102106597980687,0,0.0424616899933645,-0.0631169484503888,0,0.0424616899933645,0,0,-0.16187484418661,0.00381733594764544,0.0378202641529986,0,0,0,0,0,0,0.0424616899933645,0.409739592928856,-0.0013751137990472,0.0409256344873332,0,0.0424616899933645,0,0
@@ Line 62: / Line 76: @@
 |rna_weight_ug=
 |sample_age=
+|sample_category=developmental
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 82: / Line 97: @@
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 |xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:430-45I2;search_select_hide=table117:430-45I2
 }}

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FF:430-45I2: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 19:16, 4 June 2020

CNhs11005

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0