Personal tools

MCL coexpression mm9:863: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{MCL_coexpression_mm9
{{MCL_coexpression_mm9|coexpression_dpi_cluster_scores_mean=0.267604638855451,-0.444149849660796,-0.427747660474558,-0.392986908756298,-0.394620660838563,-0.262195392454919,-0.240612883287953,-0.119974654869533,-0.0997481187313397,-0.138216761838764,-0.219037366692429,-0.267791965922061,-0.0585816854931742,-0.138329197943231,-0.191450978471839,-0.18598357273157,-0.324843112874455,-0.0975737719030251,-0.0808176308442874,-0.129732037941075,-0.0659520479095913,0.193979037619352,0.151467425399218,-0.344907889571837,-0.362535835740241,-0.426293173201911,-0.477220273783499,-0.380217157757153,-0.385569798537637,-0.406465495869794,-0.354972023836591,-0.100613910136123,-0.222844869568877,-0.27869068235377,-0.122301356911559,-0.234679651815664,-0.175615913951903,-0.152586373272074,-0.17254724996443,-0.143156412353949,-0.186662293986937,-0.157478675485034,-0.166916164050189,-0.23083860018865,-0.204230498786988,-0.162700977472915,-0.354114076849031,-0.104640858843276,-0.282586402595501,-0.189120740168389,-0.182051885486257,-0.313344821857687,-0.12119024797052,-0.0366510513032838,-0.15278331547461,-0.364856436599489,-0.280655963911352,-0.4247773207361,0.371062842887413,0.337800795522826,0.421453417456126,-0.362143797018389,-0.20382702628221,-0.453653474740614,-0.419148866685616,-0.365251460386874,-0.24141689619592,-0.208696927076438,0.51141217650663,0.485788116204329,0.502424778812748,0.0457090143961854,0.0429551710263174,0.498450314867819,0.501462057884771,0.557022253282375,-0.0607907985399852,-0.109432518488259,-0.0954202750873372,0.364520057993686,0.339502667952592,0.414674362135661,-0.108101662346245,-0.0840805344693341,-0.0902268560479817,0.185032358487406,0.198352726523765,0.355813621491204,-0.245804870654474,-0.133560373488754,-0.0957491235484199,-0.304522724149688,-0.499351416630992,-0.408910475983806,-0.43023873772665,-0.382508134862409,-0.206258314814772,-0.264089231375894,-0.338169100367245,-0.248340011737651,0.266769423190188,-0.249626445384554,-0.0821412308882357,-0.139430915136202,-0.29787487112407,-0.241153870402104,-0.295842891057762,-0.222067264556778,-0.124340136364424,-0.215669345256996,0.147751935712066,0.0541584702286786,-0.0639252759532125,-0.0904693523456222,0.0491528565051034,-0.193091151914442,-0.177507290457155,-0.222673026062926,-0.136630246729596,-0.00863226698709666,-0.0928549915524289,-0.0725564225728617,-0.429576971427688,-0.0577595759833395,0.00941348950745679,-0.29870723545115,0.0977105014847392,-0.0082205699009203,0.0889454577059521,-0.0167666817596526,0.0590742819285746,0.441910018719616,-0.0325696410417496,-0.102625494346121,-0.0826212604620226,-0.0267846537734366,0.256451996301881,-0.0334202159977763,-0.134014251323769,-0.244636268411506,0.506658630363769,0.525766174388556,0.443071460634639,0.369499587659767,0.499230063916724,0.474873483991151,0.427046028802012,-0.0186186900381582,0.442821900999402,0.448847599597997,0.416879973761604,0.338819741339014,0.280559048080942,0.0799710023156186,0.0400086014753063,0.325603662524799,-0.0589086556421117,-0.0259432015314477,0.0258595408468385,0.214124253088517,0.226859411836751,0.206349131290616,0.163873201708039,0.104201675297855,0.0630182995397811,0.0620408589057185,0.0572263873389393,0.0916535578103151,0.0652910345165406,0.00114260085677022,-0.0680266532710298,-0.122771121531987,-0.181072223502553,-0.176838285634114,-0.00308245931504699,0.418380520109292,-0.431409411904113,-0.352630521745638,0.403260716531076,0.338460194356687,0.179528340810575,0.0520833619339614,-0.0529134651130148,0.0171338588811483,-0.288772733058251,-0.140628104722609,-0.0482843506218365,-0.050092267178055,-0.0827990130072856,-0.268698363917003,-0.254625926815671,-0.269136997501792,0.282068024464705,0.327786575400762,0.306405566402822,0.230772200796303,0.24671337371835,0.247278982292438,0.112213000912627,-0.118680670173316,-0.170279862928346,-0.164877160216067,-0.422302599464823,-0.00796548171838112,-0.0592315400587058,-0.166827588821548,-0.140774074425483,-0.111676001158254,-0.131689361284282,-0.125368581983495,-0.0699573358517495,-0.17653214542429,-0.0617967206936558,-0.164828269737464,-0.116331157244854,-0.247127828722143,-0.262932902737224,-0.32906773995758,-0.236646938221284,0.367190114772299,0.308062965999913,0.346857609867173,0.248513455654159,0.13577477515934,0.0334352685542196,0.118969862104639,0.0862937606684028,0.141666786080051,0.0781860117426567,-0.116161580747356,-0.0881908833674512,-0.128763735743923,-0.27170309025637,-0.302018054204052,-0.362163276546203,-0.190409679408759,-0.129762337067999,-0.113979293599165,-0.226999725534877,-0.226832186054341,0.265753888271448,0.279587592410697,0.336052749165469,0.246690141906355,0.247087692978609,0.30291088069632,0.249833142310657,0.256645206207497,0.281693365232491,0.167424571287933,0.00202335951245196,0.196437991235674,0.264306296618282,-0.00971654607674127,-0.323813659299012,0.224168314917695,0.186305348696554,-0.0420837171923977,-0.125889019241177,-0.0421555176710938,0.00307691661218258,-0.0180949115729441,0.0682990312672217,-0.26745012875324,-0.326676060660852,-0.235168287608584,-0.065014366275357,0.479256915996373,0.286681655411963,0.352329227239406,0.26996152970308,0.20028576259419,0.148039957452304,0.0205215142517875,-0.205175175859584,-0.139038347775537,-0.348579019026484,-0.24488452465786,0.048032559952047,-0.0560585576999259,-0.0726765711797651,-0.163744788340548,-0.220837492647037,-0.158583869611929,-0.17969301284626,0.174248126891776,0.109046759683951,-0.113211298629713,-0.203134748894338,-0.169407602387099,0.125176695207975,0.112482930182152,0.141495655475411,-0.422975595724245,0.415514173065725,0.254789535446693,0.125356696429503,0.0366522299374322,-0.0467459250311587,-0.0711670226003862,-0.00766188838778326,-0.306486455472766,-0.271271035074212,-0.291588710708136,0.0024397477378007,0.295402619307691,0.164298191596656,0.277340090602253,0.191367672379438,0.174046546449022,0.268156308017503,0.148765089945688,0.0978192530868354,0.0813273697109098,0.0500628268348959,0.488310490301075,0.152914556892627,0.174509754740617,0.211592154748115,0.319754087594782,0.341681813295336,0.421133486250249,0.411455961052588,0.479244813807244,0.477898039583161,0.468385405692683,0.449110723433509,0.44243932863372,0.478626857487666,-0.314863937844627,-0.183608772598581,-0.12225469542488,-0.227131507093779,-0.256923404385123,-0.29000229158525,-0.182851065559718,-0.23107525934422,-0.292683799610416,0.00568012806663548,-0.0164403123455562,0.00388262746390899,-0.0167781363049649,-0.206043148981396,-0.0877325103603479,-0.0294139071485404,-0.116420430377769,-0.0350701071208811,-0.0840944697882543,0.533000838901103,0.460839235904644,0.388795725956139,0.148246660462234,0.20898545417586,0.13004939004531,0.0768923861340561,0.0957849019410787,0.052621001072901,0.0765162780595094,0.139988396136298,0.0761310869301961,0.0857320956355039,0.0944496728529333,0.0841358448146571,0.140441999504314,0.0988488588461014,0.0619749125928284,0.0730128846821343,0.12395315414391,0.125273911856735,0.0734766280611048,0.0992337699259471,0.11109653458766,0.121329371004303,0.125544547338395,0.100120945232602,0.0615230770213784,0.0996382907505941,0.11570282505527,0.110055919839246,0.0915580046812959,0.0805637631259109,0.0966649578599584,0.115050297879782,0.209509636823571,0.0185395572459194,0.110364715702069,0.0322343168006238,-0.0400989198094599,-0.0740510788962905|coexpression_dpi_cluster_scores_median=0.287886873372893,-0.491701777187445,-0.361935994702381,-0.317236401868151,-0.397814956182848,-0.189749622042299,-0.235365164695057,-0.093465173294025,-0.249936844623572,-0.115007147957775,-0.200638535245753,-0.201436962609241,0.0003018208735256,-0.0220073825343179,-0.216843270564806,-0.174670030240828,-0.395216455352972,-0.0685188243317579,-0.0559364508510195,-0.125560952552288,-0.0768123447969742,0.193626139857769,0.213983156677949,-0.316466889572299,-0.32112772053417,-0.360883322350649,-0.457011516248232,-0.427815220329868,-0.343233678416087,-0.399289242403478,-0.342889726839836,-0.105475807162669,-0.240137993733145,-0.374619301233781,-0.0816202534169793,-0.229725794210569,-0.0982971290629915,-0.202630826445391,-0.191559651547379,-0.133620140399988,-0.144243290919189,-0.176136172672841,-0.223682111812558,-0.182958089791257,-0.212335038922382,-0.119223521997002,-0.237144051191204,-0.0667389386146796,-0.276590410511383,-0.166440054302572,-0.0664267829974129,-0.101005925966817,-0.101828731908317,-0.0250232546989726,-0.0503156084199132,-0.286699786851253,-0.243694223776056,-0.47624308304138,0.379448150904955,0.410468881620873,0.454426312523412,-0.338171224925434,-0.148670074286865,-0.384902294293903,-0.350711717477615,-0.295074062943836,-0.294378049177364,-0.298019665428632,0.491766521691633,0.46875700132055,0.458774825791276,0.0485183528565803,-0.004185716366408,0.441667383368495,0.460636946489736,0.678222991913251,0.0045320016775228,-0.131117857871877,-0.13064933446902,0.322572599269042,0.376171608772082,0.439237250047624,-0.0857563697621127,-0.0871369294913899,-0.0877970695332437,0.158313959075225,0.221718488098842,0.360005934301089,-0.209892205892037,-0.127241212756843,-0.129631088977756,-0.222189195264497,-0.413928906565639,-0.397125355741709,-0.468340777405989,-0.294230988255703,-0.198478180977869,-0.243249910098544,-0.280737419641796,-0.157077032737204,0.299530601982156,-0.276739340370498,-0.0141890868296366,-0.0496779854017203,-0.216141380565551,-0.167237498197608,-0.288644484881706,-0.188141134850045,-0.181520213778372,-0.180964163630835,0.146526196164908,0.0315787456676698,-0.0450633307546113,-0.0692474694272671,0.0283899477497817,-0.193347606915514,-0.175998983373757,-0.196563268133463,-0.112049520545366,0.00296426043521619,-0.11743699506909,-0.0399917210779749,-0.444303189486809,-0.0580184584534872,-0.0272763540627938,-0.27259123304537,0.084386223752933,0.00458665136322015,0.144536516362593,-0.0242783995897849,0.0496670610955282,0.407159196041566,-0.037162624656138,-0.105858446996806,-0.0988602494508394,-0.00687442740582555,0.269349351962361,-0.0320092558608562,-0.162514590827843,-0.217925288911912,0.437581004758867,0.546533776816584,0.450180928601351,0.356443021611873,0.510260295078473,0.504068159035592,0.436953842163206,-0.0290076235522456,0.416582689598109,0.465506432691278,0.444916052585612,0.342523889958275,0.268634591177596,0.0941572116180924,0.0498645366709091,0.291564024725826,0.0248411424075092,0.00189566936450454,0.0321801663334039,0.190025029017923,0.135233048972155,0.185512814618827,0.197246970996877,0.0925553832953946,0.0839613777405814,0.0894078351591741,0.0924458929456002,0.0356132265050037,0.0377664661034835,-0.0147988587278143,-0.0585433098781432,-0.07312026099783,-0.221642053631458,-0.151917927027531,-0.0031342816085929,0.419521286721244,-0.424945587437112,-0.374619301233781,0.360846633119284,0.252133510677347,0.18390902222777,0.0815379251642754,-0.0228167835498785,0.0125003199517734,-0.270406993091683,-0.155982924661977,-0.0562681927849299,-0.0613486229398662,-0.056420580955379,-0.158973817125648,-0.248707404638781,-0.254679518420641,0.320317431907983,0.266268949330546,0.285640664703172,0.196068577985525,0.23869890813591,0.22221440125235,0.0784393329898919,-0.102136652583444,-0.163365762803498,-0.126983758429653,-0.434827893000156,0.0099811884495529,-0.0292748851527881,-0.177497137872551,-0.163009392966002,-0.094861527674188,-0.0980914193210397,-0.132339398336622,-0.0485436891495831,-0.164222072646099,-0.140944094212103,-0.144071429342479,-0.0762307945590976,-0.168749517482973,-0.225357965291093,-0.306909424080461,-0.195169242514569,0.330156466904346,0.264849317718853,0.295068637065691,0.217968120403879,0.0981901404963204,0.0443384536010708,0.0802168777835559,0.125506369246962,0.147931291578611,0.104262338817862,-0.0933919836635514,-0.061556720303589,-0.167523781624442,-0.210092410678721,-0.308556012984593,-0.378285091770427,-0.174828069551703,-0.147438477355206,-0.132788205841316,-0.175632610891961,-0.151045874501668,0.184146550551353,0.203200309564235,0.293855838377631,0.198717346907842,0.215000835524913,0.266694269067368,0.210117505025952,0.219264261408537,0.250333782924015,0.120395600874022,-0.0248953664561343,0.21810065016569,0.239551287341799,-0.0190861194478631,-0.306216660544974,0.151564872469518,0.21111964037516,0.00678784682117693,-0.11571341580931,-0.0569869840995511,0.00524523991825665,-0.0240877279366094,0.0463019120185509,-0.252559677906646,-0.341388068306092,-0.220726341289095,-0.0583099133933514,0.453377449950192,0.227553961514861,0.332630275812167,0.271766689184453,0.130436118512107,0.129077504410452,-0.0226503530322579,-0.129715614854922,-0.106805142284363,-0.346074429548564,-0.283304288923173,0.0422038096060809,-0.0763806597463916,-0.0925590518882029,-0.128436057080318,-0.182639255585463,-0.192516314111828,-0.235963606439793,0.134472930706362,0.0779864202553304,-0.140924005161983,-0.238033575433628,-0.161221710934564,0.121332083339842,0.150515875279124,0.177296439531258,-0.374619301233781,0.382322404629926,0.25553763736855,0.0902011084886031,-0.017049740272384,-0.0853331354546574,-0.0604691358158208,0.00062035109934805,-0.253794577401196,-0.251233990227334,-0.288007461155515,0.143013614401543,0.273205451738096,0.0900205844716232,0.269924241816702,0.185700701185622,0.196748982099151,0.254812498308079,0.154354391071114,0.0931450217990314,0.0791295077399843,0.0088708510250372,0.424725913817293,0.126886888918793,0.145268393155798,0.194558490334763,0.302212136797973,0.302240804604468,0.417725497591624,0.398173202704783,0.471721221416526,0.46210628703415,0.459619557413727,0.42132691711671,0.427028965497186,0.509104122945913,-0.28949378081168,-0.16655930380041,-0.0457266389168097,-0.172170502247525,-0.191292173374043,-0.305514478999687,-0.146715340603479,-0.212644979843961,-0.22763094926146,-0.0166163426129208,-0.0230432906587839,-0.0305819379307307,-0.0395175723745277,-0.181479239095003,-0.0539363061362914,-0.0168664743353604,-0.0932401831834335,-0.047784233128553,-0.04036212084166,0.472444386817361,0.405378198901504,0.396595716487553,0.141104275844664,0.200916028340036,0.102796583432607,0.0971619656870994,0.0804252828393993,0.0163298647575758,0.0984869381666226,0.151867644510138,0.10036676069962,0.100421011912292,0.115840631135742,0.0977917346596134,0.147460929065345,0.11368044816956,0.104139555680606,0.103382517859699,0.129203844703412,0.142598134198217,0.0745861429392265,0.101003090375671,0.110020876666383,0.114954557821858,0.135445807826173,0.107550071517623,0.0586998611287138,0.10642084863341,0.113166791771965,0.13068790446439,0.105843566393927,0.0796408424166184,0.0952499407634556,0.123767244040252,0.191981132240964,0.0306316247523708,0.147943101968767,0.0262322338355336,-0.0377554185560017,-0.062068381159103|gostat_on_MCL_coexpression=|ontology_enrichment_celltype=CL:0000540!4.70e-09!33;CL:0000047!4.70e-09!33;CL:0000031!4.70e-09!33;CL:0000404!4.70e-09!33|ontology_enrichment_disease=|ontology_enrichment_uberon=UBERON:0000153!1.00e-07!43|tfbs_overrepresentation_for_novel_motifs=0.393008,0.289542,0.367606,0.434198,0.260188,0.448401,0.538088,0.173246,0.535519,1.50457,0.494602,0.526159,0.992329,0.550255,0.275867,0,0.742571,0.252772,0.938682,0.29826,0.332107,0.223663,0.549359,0.258745,0.374936,0.577606,0.153291,0.469052,1.48474,0.376624,0.455168,0.843667,0.699026,0.839887,1.38756,2.11044,0.678971,0.522578,0.631914,1.08217,0.256422,0.460258,0.450632,0.27776,0.209497,1.08432,0.662995,0.484612,0.170971,0.305876,0.725127,0.604356,0.362495,0.985264,1.00271,0.557354,0.314394,1.27827,0.877107,0.555328,0.823643,0.613749,0.192045,0.713876,0.568415,0.754324,1.139,1.48833,0.818971,1.34113,1.64913,0.178433,2.40121,1.03623,1.98853,1.91337,0.136938,0.651651,0.806481,0.336166,0.179489,0.759925,0.612313,0.968721,0.920903,2.55025,0.540827,0.376919,0.667883,1.65055,1.20871,0.925879,0.856465,0.265734,1.16941,0.202284,0.982739,0.859272,0.663249,0.101559,0.242106,0.843387,0.967837,0.725721,0.724668,1.16334,0.784351,0.480639,0.903338,0.887702,1.00333,0.96962,0.895335,0.499714,1.21576,0.254749,0.946242,1.11602,0.743872,0.238599,1.04163,0.692953,0.579418,0.650748,1.26989,0.810177,0.546178,0.849691,1.13749,0.740166,0.950857,0.427043,1.10792,0.570914,1.23736,0.829188,0.401212,0.461647,1.18819,2.01886,1.6187,1.14372,0.591394,0.854131,0.718197,0.460705,0.666107,1.9792,0.403515,0.261837,0.766041,4.11974,0.986833,1.12835,0.569994,1.06851,0.605358,0.287226,0.39061,1.82781,1.1977,0.920047,0.810622,0.998505,0.714896,0.562634,0.240994,0.524587,3.52736|tfbs_overrepresentation_jaspar=MA0003.1;1.81836,MA0004.1;0.434673,MA0006.1;0.271714,MA0007.1;0.419994,MA0009.1;0.870101,MA0014.1;2.94923,MA0017.1;0.296816,MA0019.1;0.688051,MA0024.1;0.826339,MA0025.1;1.10341,MA0027.1;2.51754,MA0028.1;0.281528,MA0029.1;0.804619,MA0030.1;0.811181,MA0031.1;0.775627,MA0038.1;0.577528,MA0040.1;0.882616,MA0041.1;0.360875,MA0042.1;0.348174,MA0043.1;0.966833,MA0046.1;0.906029,MA0048.1;0.335404,MA0050.1;0.472794,MA0051.1;0.586414,MA0052.1;0.890676,MA0055.1;0.282934,MA0056.1;0,MA0057.1;1.07246,MA0058.1;0.341628,MA0059.1;0.353484,MA0060.1;1.71306,MA0061.1;0.638933,MA0063.1;0,MA0066.1;0.566617,MA0067.1;1.21448,MA0068.1;1.61305,MA0069.1;0.891016,MA0070.1;0.881319,MA0071.1;0.471969,MA0072.1;0.872842,MA0073.1;7.58054,MA0074.1;0.531046,MA0076.1;0.315013,MA0077.1;0.851175,MA0078.1;0.61926,MA0081.1;0.375851,MA0083.1;0.96604,MA0084.1;1.54225,MA0087.1;0.922929,MA0088.1;1.79592,MA0089.1;0,MA0090.1;0.401197,MA0091.1;0.447561,MA0092.1;0.401504,MA0093.1;0.289361,MA0095.1;0,MA0098.1;0,MA0100.1;0.519598,MA0101.1;0.362124,MA0103.1;0.307078,MA0105.1;2.60123,MA0106.1;0.626997,MA0107.1;0.301222,MA0108.2;0.710846,MA0109.1;0,MA0111.1;0.415012,MA0113.1;0.598933,MA0114.1;0.222763,MA0115.1;0.969632,MA0116.1;0.27152,MA0117.1;0.937363,MA0119.1;0.362692,MA0122.1;0.957212,MA0124.1;1.16127,MA0125.1;1.0872,MA0130.1;0,MA0131.1;0.683521,MA0132.1;0,MA0133.1;0,MA0135.1;1.00325,MA0136.1;0.550755,MA0139.1;0.169849,MA0140.1;0.519484,MA0141.1;0.325895,MA0142.1;0.761136,MA0143.1;1.49307,MA0144.1;0.225588,MA0145.1;0.527241,MA0146.1;2.69108,MA0147.1;0.666991,MA0148.1;0.450593,MA0149.1;0.962263,MA0062.2;0.426733,MA0035.2;0.524137,MA0039.2;0.589101,MA0138.2;0.675599,MA0002.2;0.513194,MA0137.2;0.32312,MA0104.2;1.64215,MA0047.2;0.576767,MA0112.2;1.35357,MA0065.2;0.528619,MA0150.1;0.419883,MA0151.1;0,MA0152.1;0.576873,MA0153.1;1.01988,MA0154.1;0.330759,MA0155.1;0.275377,MA0156.1;0.314185,MA0157.1;0.729116,MA0158.1;0,MA0159.1;0.246253,MA0160.1;0.453546,MA0161.1;0,MA0162.1;4.08178,MA0163.1;1.79588,MA0164.1;0.551114,MA0080.2;0.302064,MA0018.2;0.560731,MA0099.2;0.669311,MA0079.2;14.393,MA0102.2;1.59466,MA0258.1;0.210437,MA0259.1;0.643936,MA0442.1;0}}
|coexpression_dpi_cluster_scores_mean=0.267604638855451,-0.444149849660796,-0.427747660474558,-0.392986908756298,-0.394620660838563,-0.262195392454919,-0.240612883287953,-0.119974654869533,-0.0997481187313397,-0.138216761838764,-0.219037366692429,-0.267791965922061,-0.0585816854931742,-0.138329197943231,-0.191450978471839,-0.18598357273157,-0.324843112874455,-0.0975737719030251,-0.0808176308442874,-0.129732037941075,-0.0659520479095913,0.193979037619352,0.151467425399218,-0.344907889571837,-0.362535835740241,-0.426293173201911,-0.477220273783499,-0.380217157757153,-0.385569798537637,-0.406465495869794,-0.354972023836591,-0.100613910136123,-0.222844869568877,-0.27869068235377,-0.122301356911559,-0.234679651815664,-0.175615913951903,-0.152586373272074,-0.17254724996443,-0.143156412353949,-0.186662293986937,-0.157478675485034,-0.166916164050189,-0.23083860018865,-0.204230498786988,-0.162700977472915,-0.354114076849031,-0.104640858843276,-0.282586402595501,-0.189120740168389,-0.182051885486257,-0.313344821857687,-0.12119024797052,-0.0366510513032838,-0.15278331547461,-0.364856436599489,-0.280655963911352,-0.4247773207361,0.371062842887413,0.337800795522826,0.421453417456126,-0.362143797018389,-0.20382702628221,-0.453653474740614,-0.419148866685616,-0.365251460386874,-0.24141689619592,-0.208696927076438,0.51141217650663,0.485788116204329,0.502424778812748,0.0457090143961854,0.0429551710263174,0.498450314867819,0.501462057884771,0.557022253282375,-0.0607907985399852,-0.109432518488259,-0.0954202750873372,0.364520057993686,0.339502667952592,0.414674362135661,-0.108101662346245,-0.0840805344693341,-0.0902268560479817,0.185032358487406,0.198352726523765,0.355813621491204,-0.245804870654474,-0.133560373488754,-0.0957491235484199,-0.304522724149688,-0.499351416630992,-0.408910475983806,-0.43023873772665,-0.382508134862409,-0.206258314814772,-0.264089231375894,-0.338169100367245,-0.248340011737651,0.266769423190188,-0.249626445384554,-0.0821412308882357,-0.139430915136202,-0.29787487112407,-0.241153870402104,-0.295842891057762,-0.222067264556778,-0.124340136364424,-0.215669345256996,0.147751935712066,0.0541584702286786,-0.0639252759532125,-0.0904693523456222,0.0491528565051034,-0.193091151914442,-0.177507290457155,-0.222673026062926,-0.136630246729596,-0.00863226698709666,-0.0928549915524289,-0.0725564225728617,-0.429576971427688,-0.0577595759833395,0.00941348950745679,-0.29870723545115,0.0977105014847392,-0.0082205699009203,0.0889454577059521,-0.0167666817596526,0.0590742819285746,0.441910018719616,-0.0325696410417496,-0.102625494346121,-0.0826212604620226,-0.0267846537734366,0.256451996301881,-0.0334202159977763,-0.134014251323769,-0.244636268411506,0.506658630363769,0.525766174388556,0.443071460634639,0.369499587659767,0.499230063916724,0.474873483991151,0.427046028802012,-0.0186186900381582,0.442821900999402,0.448847599597997,0.416879973761604,0.338819741339014,0.280559048080942,0.0799710023156186,0.0400086014753063,0.325603662524799,-0.0589086556421117,-0.0259432015314477,0.0258595408468385,0.214124253088517,0.226859411836751,0.206349131290616,0.163873201708039,0.104201675297855,0.0630182995397811,0.0620408589057185,0.0572263873389393,0.0916535578103151,0.0652910345165406,0.00114260085677022,-0.0680266532710298,-0.122771121531987,-0.181072223502553,-0.176838285634114,-0.00308245931504699,0.418380520109292,-0.431409411904113,-0.352630521745638,0.403260716531076,0.338460194356687,0.179528340810575,0.0520833619339614,-0.0529134651130148,0.0171338588811483,-0.288772733058251,-0.140628104722609,-0.0482843506218365,-0.050092267178055,-0.0827990130072856,-0.268698363917003,-0.254625926815671,-0.269136997501792,0.282068024464705,0.327786575400762,0.306405566402822,0.230772200796303,0.24671337371835,0.247278982292438,0.112213000912627,-0.118680670173316,-0.170279862928346,-0.164877160216067,-0.422302599464823,-0.00796548171838112,-0.0592315400587058,-0.166827588821548,-0.140774074425483,-0.111676001158254,-0.131689361284282,-0.125368581983495,-0.0699573358517495,-0.17653214542429,-0.0617967206936558,-0.164828269737464,-0.116331157244854,-0.247127828722143,-0.262932902737224,-0.32906773995758,-0.236646938221284,0.367190114772299,0.308062965999913,0.346857609867173,0.248513455654159,0.13577477515934,0.0334352685542196,0.118969862104639,0.0862937606684028,0.141666786080051,0.0781860117426567,-0.116161580747356,-0.0881908833674512,-0.128763735743923,-0.27170309025637,-0.302018054204052,-0.362163276546203,-0.190409679408759,-0.129762337067999,-0.113979293599165,-0.226999725534877,-0.226832186054341,0.265753888271448,0.279587592410697,0.336052749165469,0.246690141906355,0.247087692978609,0.30291088069632,0.249833142310657,0.256645206207497,0.281693365232491,0.167424571287933,0.00202335951245196,0.196437991235674,0.264306296618282,-0.00971654607674127,-0.323813659299012,0.224168314917695,0.186305348696554,-0.0420837171923977,-0.125889019241177,-0.0421555176710938,0.00307691661218258,-0.0180949115729441,0.0682990312672217,-0.26745012875324,-0.326676060660852,-0.235168287608584,-0.065014366275357,0.479256915996373,0.286681655411963,0.352329227239406,0.26996152970308,0.20028576259419,0.148039957452304,0.0205215142517875,-0.205175175859584,-0.139038347775537,-0.348579019026484,-0.24488452465786,0.048032559952047,-0.0560585576999259,-0.0726765711797651,-0.163744788340548,-0.220837492647037,-0.158583869611929,-0.17969301284626,0.174248126891776,0.109046759683951,-0.113211298629713,-0.203134748894338,-0.169407602387099,0.125176695207975,0.112482930182152,0.141495655475411,-0.422975595724245,0.415514173065725,0.254789535446693,0.125356696429503,0.0366522299374322,-0.0467459250311587,-0.0711670226003862,-0.00766188838778326,-0.306486455472766,-0.271271035074212,-0.291588710708136,0.0024397477378007,0.295402619307691,0.164298191596656,0.277340090602253,0.191367672379438,0.174046546449022,0.268156308017503,0.148765089945688,0.0978192530868354,0.0813273697109098,0.0500628268348959,0.488310490301075,0.152914556892627,0.174509754740617,0.211592154748115,0.319754087594782,0.341681813295336,0.421133486250249,0.411455961052588,0.479244813807244,0.477898039583161,0.468385405692683,0.449110723433509,0.44243932863372,0.478626857487666,-0.314863937844627,-0.183608772598581,-0.12225469542488,-0.227131507093779,-0.256923404385123,-0.29000229158525,-0.182851065559718,-0.23107525934422,-0.292683799610416,0.00568012806663548,-0.0164403123455562,0.00388262746390899,-0.0167781363049649,-0.206043148981396,-0.0877325103603479,-0.0294139071485404,-0.116420430377769,-0.0350701071208811,-0.0840944697882543,0.533000838901103,0.460839235904644,0.388795725956139,0.148246660462234,0.20898545417586,0.13004939004531,0.0768923861340561,0.0957849019410787,0.052621001072901,0.0765162780595094,0.139988396136298,0.0761310869301961,0.0857320956355039,0.0944496728529333,0.0841358448146571,0.140441999504314,0.0988488588461014,0.0619749125928284,0.0730128846821343,0.12395315414391,0.125273911856735,0.0734766280611048,0.0992337699259471,0.11109653458766,0.121329371004303,0.125544547338395,0.100120945232602,0.0615230770213784,0.0996382907505941,0.11570282505527,0.110055919839246,0.0915580046812959,0.0805637631259109,0.0966649578599584,0.115050297879782,0.209509636823571,0.0185395572459194,0.110364715702069,0.0322343168006238,-0.0400989198094599,-0.0740510788962905
|coexpression_dpi_cluster_scores_median=0.287886873372893,-0.491701777187445,-0.361935994702381,-0.317236401868151,-0.397814956182848,-0.189749622042299,-0.235365164695057,-0.093465173294025,-0.249936844623572,-0.115007147957775,-0.200638535245753,-0.201436962609241,0.0003018208735256,-0.0220073825343179,-0.216843270564806,-0.174670030240828,-0.395216455352972,-0.0685188243317579,-0.0559364508510195,-0.125560952552288,-0.0768123447969742,0.193626139857769,0.213983156677949,-0.316466889572299,-0.32112772053417,-0.360883322350649,-0.457011516248232,-0.427815220329868,-0.343233678416087,-0.399289242403478,-0.342889726839836,-0.105475807162669,-0.240137993733145,-0.374619301233781,-0.0816202534169793,-0.229725794210569,-0.0982971290629915,-0.202630826445391,-0.191559651547379,-0.133620140399988,-0.144243290919189,-0.176136172672841,-0.223682111812558,-0.182958089791257,-0.212335038922382,-0.119223521997002,-0.237144051191204,-0.0667389386146796,-0.276590410511383,-0.166440054302572,-0.0664267829974129,-0.101005925966817,-0.101828731908317,-0.0250232546989726,-0.0503156084199132,-0.286699786851253,-0.243694223776056,-0.47624308304138,0.379448150904955,0.410468881620873,0.454426312523412,-0.338171224925434,-0.148670074286865,-0.384902294293903,-0.350711717477615,-0.295074062943836,-0.294378049177364,-0.298019665428632,0.491766521691633,0.46875700132055,0.458774825791276,0.0485183528565803,-0.004185716366408,0.441667383368495,0.460636946489736,0.678222991913251,0.0045320016775228,-0.131117857871877,-0.13064933446902,0.322572599269042,0.376171608772082,0.439237250047624,-0.0857563697621127,-0.0871369294913899,-0.0877970695332437,0.158313959075225,0.221718488098842,0.360005934301089,-0.209892205892037,-0.127241212756843,-0.129631088977756,-0.222189195264497,-0.413928906565639,-0.397125355741709,-0.468340777405989,-0.294230988255703,-0.198478180977869,-0.243249910098544,-0.280737419641796,-0.157077032737204,0.299530601982156,-0.276739340370498,-0.0141890868296366,-0.0496779854017203,-0.216141380565551,-0.167237498197608,-0.288644484881706,-0.188141134850045,-0.181520213778372,-0.180964163630835,0.146526196164908,0.0315787456676698,-0.0450633307546113,-0.0692474694272671,0.0283899477497817,-0.193347606915514,-0.175998983373757,-0.196563268133463,-0.112049520545366,0.00296426043521619,-0.11743699506909,-0.0399917210779749,-0.444303189486809,-0.0580184584534872,-0.0272763540627938,-0.27259123304537,0.084386223752933,0.00458665136322015,0.144536516362593,-0.0242783995897849,0.0496670610955282,0.407159196041566,-0.037162624656138,-0.105858446996806,-0.0988602494508394,-0.00687442740582555,0.269349351962361,-0.0320092558608562,-0.162514590827843,-0.217925288911912,0.437581004758867,0.546533776816584,0.450180928601351,0.356443021611873,0.510260295078473,0.504068159035592,0.436953842163206,-0.0290076235522456,0.416582689598109,0.465506432691278,0.444916052585612,0.342523889958275,0.268634591177596,0.0941572116180924,0.0498645366709091,0.291564024725826,0.0248411424075092,0.00189566936450454,0.0321801663334039,0.190025029017923,0.135233048972155,0.185512814618827,0.197246970996877,0.0925553832953946,0.0839613777405814,0.0894078351591741,0.0924458929456002,0.0356132265050037,0.0377664661034835,-0.0147988587278143,-0.0585433098781432,-0.07312026099783,-0.221642053631458,-0.151917927027531,-0.0031342816085929,0.419521286721244,-0.424945587437112,-0.374619301233781,0.360846633119284,0.252133510677347,0.18390902222777,0.0815379251642754,-0.0228167835498785,0.0125003199517734,-0.270406993091683,-0.155982924661977,-0.0562681927849299,-0.0613486229398662,-0.056420580955379,-0.158973817125648,-0.248707404638781,-0.254679518420641,0.320317431907983,0.266268949330546,0.285640664703172,0.196068577985525,0.23869890813591,0.22221440125235,0.0784393329898919,-0.102136652583444,-0.163365762803498,-0.126983758429653,-0.434827893000156,0.0099811884495529,-0.0292748851527881,-0.177497137872551,-0.163009392966002,-0.094861527674188,-0.0980914193210397,-0.132339398336622,-0.0485436891495831,-0.164222072646099,-0.140944094212103,-0.144071429342479,-0.0762307945590976,-0.168749517482973,-0.225357965291093,-0.306909424080461,-0.195169242514569,0.330156466904346,0.264849317718853,0.295068637065691,0.217968120403879,0.0981901404963204,0.0443384536010708,0.0802168777835559,0.125506369246962,0.147931291578611,0.104262338817862,-0.0933919836635514,-0.061556720303589,-0.167523781624442,-0.210092410678721,-0.308556012984593,-0.378285091770427,-0.174828069551703,-0.147438477355206,-0.132788205841316,-0.175632610891961,-0.151045874501668,0.184146550551353,0.203200309564235,0.293855838377631,0.198717346907842,0.215000835524913,0.266694269067368,0.210117505025952,0.219264261408537,0.250333782924015,0.120395600874022,-0.0248953664561343,0.21810065016569,0.239551287341799,-0.0190861194478631,-0.306216660544974,0.151564872469518,0.21111964037516,0.00678784682117693,-0.11571341580931,-0.0569869840995511,0.00524523991825665,-0.0240877279366094,0.0463019120185509,-0.252559677906646,-0.341388068306092,-0.220726341289095,-0.0583099133933514,0.453377449950192,0.227553961514861,0.332630275812167,0.271766689184453,0.130436118512107,0.129077504410452,-0.0226503530322579,-0.129715614854922,-0.106805142284363,-0.346074429548564,-0.283304288923173,0.0422038096060809,-0.0763806597463916,-0.0925590518882029,-0.128436057080318,-0.182639255585463,-0.192516314111828,-0.235963606439793,0.134472930706362,0.0779864202553304,-0.140924005161983,-0.238033575433628,-0.161221710934564,0.121332083339842,0.150515875279124,0.177296439531258,-0.374619301233781,0.382322404629926,0.25553763736855,0.0902011084886031,-0.017049740272384,-0.0853331354546574,-0.0604691358158208,0.00062035109934805,-0.253794577401196,-0.251233990227334,-0.288007461155515,0.143013614401543,0.273205451738096,0.0900205844716232,0.269924241816702,0.185700701185622,0.196748982099151,0.254812498308079,0.154354391071114,0.0931450217990314,0.0791295077399843,0.0088708510250372,0.424725913817293,0.126886888918793,0.145268393155798,0.194558490334763,0.302212136797973,0.302240804604468,0.417725497591624,0.398173202704783,0.471721221416526,0.46210628703415,0.459619557413727,0.42132691711671,0.427028965497186,0.509104122945913,-0.28949378081168,-0.16655930380041,-0.0457266389168097,-0.172170502247525,-0.191292173374043,-0.305514478999687,-0.146715340603479,-0.212644979843961,-0.22763094926146,-0.0166163426129208,-0.0230432906587839,-0.0305819379307307,-0.0395175723745277,-0.181479239095003,-0.0539363061362914,-0.0168664743353604,-0.0932401831834335,-0.047784233128553,-0.04036212084166,0.472444386817361,0.405378198901504,0.396595716487553,0.141104275844664,0.200916028340036,0.102796583432607,0.0971619656870994,0.0804252828393993,0.0163298647575758,0.0984869381666226,0.151867644510138,0.10036676069962,0.100421011912292,0.115840631135742,0.0977917346596134,0.147460929065345,0.11368044816956,0.104139555680606,0.103382517859699,0.129203844703412,0.142598134198217,0.0745861429392265,0.101003090375671,0.110020876666383,0.114954557821858,0.135445807826173,0.107550071517623,0.0586998611287138,0.10642084863341,0.113166791771965,0.13068790446439,0.105843566393927,0.0796408424166184,0.0952499407634556,0.123767244040252,0.191981132240964,0.0306316247523708,0.147943101968767,0.0262322338355336,-0.0377554185560017,-0.062068381159103
|gostat_on_MCL_coexpression=
}}

Latest revision as of 16:00, 17 September 2013


Phase1 CAGE Peaks

 Short description
Mm9::chr10:39451608..39451688,-p1@ENSMUST00000139356
p1@ENSMUST00000139429
p1@ENSMUST00000143651
Mm9::chr11:3189683..3189744,+p2@Patz1
Mm9::chr11:93747471..93747524,+p1@Mbtd1
Mm9::chr14:73542767..73542848,+p2@Rcbtb2
Mm9::chr14:73542853..73542879,+p4@Rcbtb2
Mm9::chr2:146839053..146839071,-p@chr2:146839053..146839071
-
Mm9::chr5:34163344..34163484,+p1@Whsc1
Mm9::chrX:54646148..54646165,-p1@Rbmx


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

no results for this coexpression

Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>

Cell Type
Ontology termp-valuen
neuron4.70e-0933
neuronal stem cell4.70e-0933
neuroblast4.70e-0933
electrically signaling cell4.70e-0933

Uber Anatomy
Ontology termp-valuen
anterior region of body1.00e-0743


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)
MA0003.11.81836
MA0004.10.434673
MA0006.10.271714
MA0007.10.419994
MA0009.10.870101
MA0014.12.94923
MA0017.10.296816
MA0019.10.688051
MA0024.10.826339
MA0025.11.10341
MA0027.12.51754
MA0028.10.281528
MA0029.10.804619
MA0030.10.811181
MA0031.10.775627
MA0038.10.577528
MA0040.10.882616
MA0041.10.360875
MA0042.10.348174
MA0043.10.966833
MA0046.10.906029
MA0048.10.335404
MA0050.10.472794
MA0051.10.586414
MA0052.10.890676
MA0055.10.282934
MA0056.10
MA0057.11.07246
MA0058.10.341628
MA0059.10.353484
MA0060.11.71306
MA0061.10.638933
MA0063.10
MA0066.10.566617
MA0067.11.21448
MA0068.11.61305
MA0069.10.891016
MA0070.10.881319
MA0071.10.471969
MA0072.10.872842
MA0073.17.58054
MA0074.10.531046
MA0076.10.315013
MA0077.10.851175
MA0078.10.61926
MA0081.10.375851
MA0083.10.96604
MA0084.11.54225
MA0087.10.922929
MA0088.11.79592
MA0089.10
MA0090.10.401197
MA0091.10.447561
MA0092.10.401504
MA0093.10.289361
MA0095.10
MA0098.10
MA0100.10.519598
MA0101.10.362124
MA0103.10.307078
MA0105.12.60123
MA0106.10.626997
MA0107.10.301222
MA0108.20.710846
MA0109.10
MA0111.10.415012
MA0113.10.598933
MA0114.10.222763
MA0115.10.969632
MA0116.10.27152
MA0117.10.937363
MA0119.10.362692
MA0122.10.957212
MA0124.11.16127
MA0125.11.0872
MA0130.10
MA0131.10.683521
MA0132.10
MA0133.10
MA0135.11.00325
MA0136.10.550755
MA0139.10.169849
MA0140.10.519484
MA0141.10.325895
MA0142.10.761136
MA0143.11.49307
MA0144.10.225588
MA0145.10.527241
MA0146.12.69108
MA0147.10.666991
MA0148.10.450593
MA0149.10.962263
MA0062.20.426733
MA0035.20.524137
MA0039.20.589101
MA0138.20.675599
MA0002.20.513194
MA0137.20.32312
MA0104.21.64215
MA0047.20.576767
MA0112.21.35357
MA0065.20.528619
MA0150.10.419883
MA0151.10
MA0152.10.576873
MA0153.11.01988
MA0154.10.330759
MA0155.10.275377
MA0156.10.314185
MA0157.10.729116
MA0158.10
MA0159.10.246253
MA0160.10.453546
MA0161.10
MA0162.14.08178
MA0163.11.79588
MA0164.10.551114
MA0080.20.302064
MA0018.20.560731
MA0099.20.669311
MA0079.214.393
MA0102.21.59466
MA0258.10.210437
MA0259.10.643936
MA0442.10
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MCL_coexpression_mm9:863&oldid=3072862"